LOCUS BC046222 2307 bp mRNA linear HUM 30-SEP-2003
DEFINITION Homo sapiens rotatin, mRNA (cDNA clone IMAGE:6198495), partial cds.
ACCESSION BC046222
VERSION BC046222.2
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2307)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2307)
AUTHORS Strausberg,R.
TITLE Direct Submission
JOURNAL Submitted (31-JAN-2003) National Institutes of Health, Mammalian
Gene Collection (MGC), Cancer Genomics Office, National Cancer
Institute, 31 Center Drive, Room 11A03, Bethesda, MD 20892-2590,
USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Sep 16, 2003 this sequence version replaced BC046222.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Dr. James R. Lupski
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 107 Row: o Column: 20.
FEATURES Location/Qualifiers
source 1..2307
/db_xref="H-InvDB:HIT000098338"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:6198495"
/tissue_type="Peripheral Nervous System, sympathetic
trunk"
/clone_lib="Lupski_sympathetic_trunk"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene <1..2307
/gene="RTTN"
/gene_synonym="DKFZP434G145"
/gene_synonym="FLJ39085"
/db_xref="GeneID:25914"
CDS <1..1947
/gene="RTTN"
/gene_synonym="DKFZP434G145"
/gene_synonym="FLJ39085"
/codon_start=1
/product="RTTN protein"
/protein_id="AAH46222.2"
/db_xref="GeneID:25914"
/translation="FVAQGHQESTSPRPPHDSSLSAPLPKLCVFVTPSLLSAMCSLLD
NLLTIAPRDTAKAFRQAHLIELLCSIADATLIQTCVQELRALLPSSPPAEHTQAQVSF
LLEYLSSLSRLLQSCLLVEPDLVIQDELVKPLITNIIGILTICTKDVLDKELISAFYH
TWTHLFNLLAMLLRKAGAITLPFVTVALAKHWTAAIDMFCTCAGLSATCPALYTASLQ
FLSVLLTEEAKGHLQAKSKTHLCCSPTVASLLDDSQENQKSLEQLSDVILQCYEGKSS
KDILKRVAANALMSLLAVSRRAQKHALKANLIDNCMEQMKHINAQLNLDSLRPGKAAL
KKKEDGVIKELSIAMQLLRNCPYQNEECKEAALEAHLVPVLHSLWPWILMDDSLMQIS
LQLLCVYTANFPNGCSSLCWSSCGQHPVQATHRGAVSNSLMLCILKLASQMPLENTTV
QQMVFMLLSNLALSHDCKGVIQKSNFLQNFLSLALPKGGNKHLSNLTILWLKLLLNIS
SGEDGQQMILRLDGCLDLLTEMSKYKHKSSPLLPLLIFHNVCFSPANKPKILANEKVI
TVLAACLESENQNAQRIGAAALWALIYNYQKAKTALKSPSVKRRVDEAYSLAKKTFPN
SEANPLNAYYLKCLENLVQLLNSS"
BASE COUNT 662 a 528 c 456 g 661 t
ORIGIN
1 tttgtggctc aaggtcacca ggaaagtaca tcaccacggc cacctcatga ttcatctctt
61 tctgctcccc tgcccaaact gtgtgttttt gttactccat ctcttctttc agcaatgtgc
121 agcctcttgg acaacctctt gacgattgct cccagagaca ctgcaaaggc ttttcgacaa
181 gctcatctca tagaacttct ctgtagcatt gcagatgcta ccctcataca gacatgtgtc
241 caggaactca gagccctgct gccttcatca cctccagctg aacacactca ggctcaggtt
301 tcctttctcc tggaatacct atcctctttg tccaggcttc tgcagtcatg tttattggtg
361 gagcctgacc ttgtgattca ggatgagctt gtgaaacctc ttatcaccaa tatcattgga
421 attctcacca tatgtaccaa agatgtatta gataaagagt taatatcagc tttttatcac
481 acatggacac atttatttaa tcttctggcc atgctcctga ggaaagctgg tgccatcaca
541 ctcccgtttg ttaccgtggc cctggccaag cactggacag cggcgattga tatgttctgc
601 acatgtgcag gcttgtctgc cacgtgtcct gccctgtata ctgccagctt gcaattcctt
661 tctgttctct tgaccgaaga agcaaaaggg catctccagg ctaagagcaa aacacattta
721 tgctgtagtc caacagtggc ttcacttctt gatgactctc aggaaaatca gaaatctcta
781 gaacaactta gtgatgtaat ccttcagtgc tatgaaggga aatcctccaa agatatcctg
841 aaaagagtag ctgcaaatgc attgatgtca ctgctggctg tcagtagaag agcacagaaa
901 catgctttga aagccaatct tatagacaat tgcatggagc agatgaaaca cataaatgca
961 caactgaacc tagattctct gaggcctggg aaagcagcat tgaaaaaaaa ggaggatggt
1021 gttattaaag agttaagcat tgccatgcag ctcctaagaa actgtcctta tcaaaatgag
1081 gaatgtaaag aagcagctct tgaagctcac cttgtccctg tcttgcactc tctctggcct
1141 tggattttga tggatgattc attgatgcaa atttctctgc agctcctttg tgtctatact
1201 gcaaattttc caaatggttg cagttctctt tgttggtcaa gttgtggaca acaccctgtt
1261 caagctacac atagaggagc cgtgagcaac tctctgatgc tgtgtatcct aaagttggct
1321 tcccagatgc cactggagaa caccacggtt cagcagatgg tttttatgct tctttcaaac
1381 ctggccttgt cgcatgactg taaaggagta attcagaaga gtaacttctt acagaacttc
1441 ctctctctag cattgccaaa aggaggaaat aaacatctaa gtaatctgac tattctttgg
1501 ttgaagttac tcctgaatat atcatctgga gaagatgggc aacaaatgat tctgaggctt
1561 gatggctgtc tagacttact aacagagatg agcaaataca agcacaagag cagcccttta
1621 ttgcctcttc ttatctttca taatgtttgc ttcagtcctg caaataaacc caagatcctg
1681 gctaatgaaa aagtcattac tgtgcttgct gcctgtctgg aaagtgagaa tcaaaatgct
1741 cagaggattg gagcagctgc cctttgggct ctgatttaca attatcagaa ggcaaaaaca
1801 gctttgaaaa gcccatcagt aaaaagaaga gtggatgaag catactcctt agcaaagaaa
1861 actttcccaa actcagaagc aaaccctcta aatgcctatt atttgaaatg tcttgaaaac
1921 ctcgtgcagc tccttaattc ttcctgagtg ccatgggatg ctacaccttg aagctgacag
1981 tcatcaacag gggagctaaa gttgaagcca gctgtgtgta gcagctgtta cctgaagacg
2041 tgctacctct ctacaaagtg ttgatcccct tctttcccat gagagagaga actggtgata
2101 ctccaacacc gtccagttgt ggcagctctc cagaagtaat agcagctgac aactttctgt
2161 gccttttcct ttctgttgaa aaggcataga aagttctggg aacataaaca tttttaccct
2221 tttctatgcc atttattttg taaaaatcct atttaacagt tatttaataa aacaatattt
2281 ttagaaacta aaaaaaaaaa aaaaaaa
//