LOCUS BC046152 2052 bp mRNA linear HUM 11-AUG-2006
DEFINITION Homo sapiens selenoprotein P, plasma, 1, mRNA (cDNA clone MGC:57675
IMAGE:6192976), complete cds.
ACCESSION BC046152
VERSION BC046152.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2052)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2052)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (31-JAN-2003) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Dr. James R. Lupski
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 107 Row: n Column: 5
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 62530390.
FEATURES Location/Qualifiers
source 1..2052
/db_xref="H-InvDB:HIT000098286"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:57675 IMAGE:6192976"
/tissue_type="Peripheral Nervous System, sympathetic
trunk"
/clone_lib="Lupski_sympathetic_trunk"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..2052
/gene="SEPP1"
/gene_synonym="SELP"
/gene_synonym="SeP"
/db_xref="GeneID:6414"
/db_xref="HGNC:HGNC:10751"
/db_xref="MIM:601484"
CDS 52..1197
/gene="SEPP1"
/gene_synonym="SELP"
/gene_synonym="SeP"
/codon_start=1
/transl_except=(pos:226..228,aa:Sec)
/transl_except=(pos:949..951,aa:Sec)
/transl_except=(pos:1003..1005,aa:Sec)
/transl_except=(pos:1039..1041,aa:Sec)
/transl_except=(pos:1084..1086,aa:Sec)
/transl_except=(pos:1105..1107,aa:Sec)
/transl_except=(pos:1150..1152,aa:Sec)
/transl_except=(pos:1156..1158,aa:Sec)
/transl_except=(pos:1177..1179,aa:Sec)
/transl_except=(pos:1183..1185,aa:Sec)
/product="selenoprotein P, plasma, 1"
/protein_id="AAH46152.1"
/db_xref="GeneID:6414"
/db_xref="HGNC:HGNC:10751"
/db_xref="MIM:601484"
/translation="MWRSLGLALALCLLPSGGTESQDQSSLCKQPPAWSIRDQDPMLN
SNGSVTVVALLQASUYLCILQASKLEDLRVKLKKEGYSNISYIVVNHQGISSRLKYTH
LKNKVSEHIPVYQQEENQTDVWTLLNGSKDDFLIYDRCGRLVYHLGLPFSFLTFPYVE
EAIKIAYCEKKCGNCSLTTLKDEDFCKRVSLATVDKTVETPSPHYHHEHHHNHGHQHL
GSSELSENQQPGAPNTPTHPAPPGLHHHHKHKGQHRQGHPENRDMPASEDLQDLQKKL
CRKRCINQLLCKLPTDSELAPRSUCCHCRHLIFEKTGSAITUQCKENLPSLCSUQGLR
AEENITESCQURFPPAAUQISQQLIPTEASASURUKNQAKKUEUPSN"
BASE COUNT 679 a 401 c 364 g 608 t
ORIGIN
1 gcaaagagaa aggaagcagg cccgttggaa gtggttgtga caaccccagc aatgtggaga
61 agcctggggc ttgccctggc tctctgtctc ctcccatcgg gaggaacaga gagccaggac
121 caaagctcct tatgtaagca acccccagcc tggagcataa gagatcaaga tccaatgcta
181 aactccaatg gttcagtgac tgtggttgct cttcttcaag ccagctgata cctgtgcata
241 ctgcaggcat ctaaattaga agacctgcga gtaaaactga agaaagaagg atattctaat
301 atttcttata ttgttgttaa tcatcaagga atctcttctc gattaaaata cacacatctt
361 aagaataagg tttcagagca tattcctgtt tatcaacaag aagaaaacca aacagatgtc
421 tggactcttt taaatggaag caaagatgac ttcctcatat atgatagatg tggccgtctt
481 gtatatcatc ttggtttgcc tttttccttc ctaactttcc catatgtaga agaagccatt
541 aagattgctt actgtgaaaa gaaatgtgga aactgctctc tcacgactct caaagatgaa
601 gacttttgta aacgtgtatc tttggctact gtggataaaa cagttgaaac tccatcgcct
661 cattaccatc atgagcatca tcacaatcat ggacatcagc accttggcag cagtgagctt
721 tcagagaatc agcaaccagg agcaccaaat actcctactc atcctgctcc tccaggcctt
781 catcaccacc ataagcacaa gggtcagcat aggcagggtc acccagagaa ccgagatatg
841 ccagcaagtg aagatttaca agatttacaa aagaagctct gtcgaaagag atgtataaat
901 caattactct gtaaattgcc cacagattca gagttggctc ctaggagctg atgctgccat
961 tgtcgacatc tgatatttga aaaaacaggg tctgcaatca cctgacagtg taaagaaaac
1021 ctcccatctt tatgtagctg acagggactt cgggcagagg agaacataac tgaatcttgt
1081 cagtgacgtt ttcctccagc tgcctgacaa ataagtcagc agcttatacc cacagaagcc
1141 agtgccagtt gacgctgaaa gaatcaggca aaaaagtgag aatgaccttc aaactaaata
1201 tttaaaatag gacatactcc ccaatttagt ctagacacaa tttcatttcc agcattttta
1261 taaactacca aattagtgaa ccaaaaatag aaatcagatt tgtgcaaaca tggagaaatc
1321 tactgaattg gcttccagat tttaaatttt atgtcataga aatattgact caaaccatat
1381 tttttatgat ggagcaactg aaaggtgatt gcagcttttg gttaatatgt cttttttttt
1441 tctttttcca gtgttctatt tgctttaatg agaatagaaa cgtaaactat gacctagggg
1501 tttctgttgg ataattagca gtttagaatg gaggaagaac aacaaagaca tgctttccat
1561 ttttttcttt acttatctct caaaacaata ttactttgtc ttttcaatct tctactttta
1621 actaataaaa taagtggatt ttgtatttta agatccagaa atacttaaca cgtgaatatt
1681 ttgctaaaaa agcatatata actattttaa atatccattt atcttttgta tatctaagac
1741 tcatcctgat ttttactatc acacatgaat aaagcctttg tatctttctt tctctaatgt
1801 tgtatcatac tcttctaaaa cttgagtggc tgtcttaaaa gatataaggg gaaagataat
1861 attgtctgtc tctatattgc ttagtaagta tttccatagt caatgatggt ttaataggta
1921 aaccaaaccc tataaacctg acctccttta tggttaatac tattaagcaa gaatgcagta
1981 cagaattgga tacagtacgg atttgtccaa ataaattcaa taaaaacctt aaagctgaaa
2041 aaaaaaaaaa aa
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