LOCUS BC046129 2054 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens UDP-N-acetyl-alpha-D-galactosamine:polypeptide
N-acetylgalactosaminyltransferase 7 (GalNAc-T7), mRNA (cDNA clone
MGC:57606 IMAGE:4442080), complete cds.
ACCESSION BC046129
VERSION BC046129.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2054)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2054)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (31-JAN-2003) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 107 Row: b Column: 16
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 8393408.
FEATURES Location/Qualifiers
source 1..2054
/db_xref="H-InvDB:HIT000052998"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:57606 IMAGE:4442080"
/tissue_type="Liver, adenocarcinoma"
/clone_lib="NIH_MGC_90"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..2054
/gene="GALNT7"
/gene_synonym="GALNAC-T7"
/gene_synonym="GalNAcT7"
/db_xref="GeneID:51809"
/db_xref="HGNC:HGNC:4129"
/db_xref="MIM:605005"
CDS 62..2035
/gene="GALNT7"
/gene_synonym="GALNAC-T7"
/gene_synonym="GalNAcT7"
/codon_start=1
/product="UDP-N-acetyl-alpha-D-galactosamine:polypeptide
N-acetylgalactosaminyltransferase 7 (GalNAc-T7)"
/protein_id="AAH46129.1"
/db_xref="GeneID:51809"
/db_xref="HGNC:HGNC:4129"
/db_xref="MIM:605005"
/translation="MRLKIGFILRSLLVVGSFLGLVVLWSSLTPRPDDPSPLSRMRED
RDVNDPMPNRGGNGLAPGEDRFKPVVPWPHVEGVEVDLESIRRINKAKNEQEHHAGGD
SQKDIMQRQYLTFKPQTFTYHDPVLRPGILGNFEPKEPEPPGVVGGPGEKAKPLVLGP
EFKQAIQASIKEFGFNMVASDMISLDRSVNDLRQEECKYWHYDENLLTSSVVIVFHNE
GWSTLMRTVHSVIKRTPRKYLAEIVLIDDFSNKEHLKEKLDEYIKLWNGLVKVFRNER
REGLIQARSIGAQKAKLGQVLIYLDAHCEVAVNWYAPLVAPISKDRTICTVPLIDVIN
GNTYEIIPQGGGDEDGYARGAWDWSMLWKRVPLTPQEKRLRKTKTEPYRSPAMAGGLF
AIEREFFFELGLYDPGLQIWGGENFEISYKIWQCGGKLLFVPCSRVGHIYRLEGWQGN
PPPIYVGSSPTLKNYVRVVEVWWDEYKDYFYASRPESQALPYGDISELKKFREDHNCK
SFKWFMEEIAYDITSHYPLPPKNVDWGEIRGFETAYCIDSMGKTNGGFVELGPCHRMG
GNQLFRINEANQLMQYDQCLTKGADGSKVMITHCNLNEFKEWQYFKNLHRFTHIPSGK
CLDRSEVLHQVFISNCDSSKTTQKWEMNNIHSV"
BASE COUNT 621 a 401 c 524 g 508 t
ORIGIN
1 gggaggggag agcggtggcg gcggctgcgc cgggctgtga gtctctcgcc gccggaggaa
61 gatgaggctg aagattggat tcatcttacg cagtttgctg gtggtgggaa gcttcctggg
121 gctagtggtc ctctggtctt ccctgacccc gcggccggac gacccaagcc cgctgagcag
181 gatgagggaa gacagagatg tcaatgaccc catgcccaac cgaggcggca atggactagc
241 tcctggggag gacagattca aacctgtggt accatggcct catgttgaag gagtagaagt
301 ggacttagag tctattagaa gaataaacaa ggccaaaaat gaacaagagc accatgctgg
361 aggagattcc cagaaagata tcatgcagag gcagtatctc acatttaagc ctcagacatt
421 cacctaccat gatcctgtgc ttcgcccagg gatcctcggt aactttgaac ccaaagaacc
481 tgagcctcct ggagtggttg gtggccctgg agagaaagcc aagccattgg ttttgggacc
541 agaattcaaa caagcaattc aagccagcat taaagagttt ggatttaaca tggtggcaag
601 tgacatgatc tcactggacc gcagcgtcaa tgacttacgc caagaagaat gcaagtattg
661 gcattatgat gaaaacttgc tcacttcgag cgttgtcatt gtcttccata atgaaggatg
721 gtcaaccctc atgagaacag tccacagtgt aattaaaagg actccaagga aatatttagc
781 agaaattgtg ttaattgacg atttcagtaa taaagaacac ttaaaagaaa aactggatga
841 atatattaag ctgtggaatg gcctagtgaa ggtatttcga aatgaaagaa gggaaggttt
901 aattcaagca cgaagtattg gtgctcagaa ggctaaactt ggacaggttt tgatatacct
961 tgatgcccac tgtgaggtgg cagttaactg gtatgcacca cttgtagctc ccatatctaa
1021 ggacagaacc atttgcactg tgccgcttat agatgtcata aatggcaaca catatgaaat
1081 tataccccaa gggggtggtg atgaagatgg gtatgcccga ggagcatggg attggagtat
1141 gctctggaaa cgggtgcctc tgacccctca agagaagaga ctgagaaaga caaaaactga
1201 accgtatcgg tccccagcca tggctggggg attatttgcc attgaacgag agttcttctt
1261 tgaattgggt ctctatgatc caggtctcca gatttggggt ggtgaaaact ttgagatctc
1321 atacaagata tggcagtgtg gtggcaaatt attatttgtt ccttgttctc gtgttggaca
1381 tatctaccgt cttgagggct ggcaaggaaa tcctccgccc atttatgttg ggtcttctcc
1441 aactctgaag aattatgtta gagttgtgga ggtttggtgg gatgaatata aagactactt
1501 ctatgctagt cgtcctgaat cgcaggcatt accatatggg gatatatcgg agctgaaaaa
1561 atttcgagaa gatcacaact gcaaaagttt taagtggttc atggaagaaa tagcttatga
1621 tatcacctca cactaccctt tgccacccaa aaatgttgac tggggagaaa tcagaggctt
1681 cgaaactgct tactgcattg atagcatggg aaaaacaaat ggaggctttg ttgaactagg
1741 accctgccac aggatgggag ggaatcagct tttcagaatc aatgaagcaa atcaactcat
1801 gcagtatgac cagtgtttga caaagggagc tgatggatca aaagttatga ttacacactg
1861 taatctaaat gaatttaagg aatggcagta cttcaagaac ctgcacagat ttactcatat
1921 tccttcagga aagtgtttag atcgctcaga ggtcctgcat caagtattca tctccaattg
1981 tgactccagt aaaacgactc aaaaatggga aatgaataac atccatagtg tttagagaga
2041 aaaaaaaaaa aaaa
//