LOCUS BC046122 2119 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens U-box domain containing 5, mRNA (cDNA clone MGC:57578
IMAGE:5554044), complete cds.
ACCESSION BC046122
VERSION BC046122.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2119)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2119)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (31-JAN-2003) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Lou Staudt
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 107 Row: g Column: 5
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 40806183.
FEATURES Location/Qualifiers
source 1..2119
/db_xref="H-InvDB:HIT000052994"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:57578 IMAGE:5554044"
/tissue_type="Lymph, lymphoma"
/clone_lib="NIH_MGC_85"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..2119
/gene="UBOX5"
/gene_synonym="KIAA0860"
/gene_synonym="RNF37"
/gene_synonym="UBCE7IP5"
/gene_synonym="UIP5"
/db_xref="GeneID:22888"
/db_xref="HGNC:HGNC:17777"
CDS 147..1610
/gene="UBOX5"
/gene_synonym="KIAA0860"
/gene_synonym="RNF37"
/gene_synonym="UBCE7IP5"
/gene_synonym="UIP5"
/codon_start=1
/product="U-box domain containing 5"
/protein_id="AAH46122.1"
/db_xref="GeneID:22888"
/db_xref="HGNC:HGNC:17777"
/translation="MVINLCLPQFRPRIHCNKISADGYEVENLISEDLTKRSHGFRTE
YFIKPPVYVTVSFPFNVEICRINIDLTAGGGQNVTGLEMYTSASSSRVSWNTPQCRTL
GPAEPSVPDKEAFTLVGKVLLKNQSQVVFSHRGFKARPPFGAMEATLPSPAVVAQELW
NKGALSLSHVAHLRICITHVTGGGIPCIKRLEVWGQPAKTCSQEVIDSILLVTSENLP
QDVALQAPALPMESDCDPGDQPESQQAPSSLQKLAEIIQDVPEEFLDPITLEIMPCPM
LLPSGKVIDQSTLEKCNRSEATWGRVPSDPFTGVAFTPHSQPLPHPSLKARIDHFLLQ
HSIPGCHLLGRAQTALAVIPSSIVLPSQKRKIEQAEHVPDSNFGVNASCFSATSPLVL
PTTSEHTAKKMKATNEPSLTHMDCSTEQPGSILGPECASCKRVFSPYFKKEPVYQLPC
GHLLCRPCLGEKQRSLPMTCTACQRPVASQDVLRVHF"
BASE COUNT 467 a 646 c 572 g 434 t
ORIGIN
1 gtggggctgt gaggctcgga gtcgccggag gagccagtat ctgtgtcgcc gccgcccgcg
61 gcgtccccgg tttggtgttg cggcgcccac cttcgggagg atcaggctgc ttctgatgct
121 tggaagatat cctctcagcc acaaagatgg taataaatct ttgcctccca cagttcagac
181 caagaattca ctgcaacaag atatcagctg atggttacga agtagaaaat ctcatctctg
241 aagatctcac aaagagaagt catggtttca ggacagagta tttcattaag ccaccagtct
301 atgtgacagt ttcatttccc tttaatgtgg aaatctgtag gatcaacata gacctcacag
361 ctgggggagg tcagaacgtc actggcctgg aaatgtacac atctgcctca tctagcagag
421 tgtcttggaa tacgccccag tgccggaccc tgggcccagc tgagccatct gtcccagaca
481 aggaggcgtt caccttggta ggcaaagtct tactgaaaaa ccagagccaa gtggtgttta
541 gccacagggg cttcaaggcc aggccccctt ttggcgcgat ggaagccaca ctcccctccc
601 ctgctgttgt ggcccaggag ctctggaata aaggggctct ttcccttagc cacgtggccc
661 acttaaggat ctgtatcacc catgtgacag gcggcggtat cccttgtatc aagcggttgg
721 aagtgtgggg tcagccggcc aagacctgct cccaggaagt gatagacagc atcctgctgg
781 tcacctcaga gaacctgcct caggatgtgg ctctgcaggc tccagccttg cccatggaaa
841 gtgactgtga ccctggggac cagcctgaga gccagcaggc tccctccagc ctgcagaagc
901 tggccgagat cattcaggat gtgcctgagg agttcctgga tcccatcacc ctggagatca
961 tgccttgtcc catgctgctg ccctcaggca aggtcatcga ccagagcaca ctggagaagt
1021 gtaaccgcag tgaagccaca tggggccgag tgcccagtga ccctttcacg ggggtagctt
1081 ttactccgca ctctcagccc ctgcctcacc cctccctcaa ggcccggatt gaccatttcc
1141 tgctccagca ctccatccct ggctgccacc tgcttgggag agcacagacg gcattggcag
1201 tgatcccttc ttccattgtt ctgccctctc agaaaaggaa gatagagcag gctgaacatg
1261 tcccagacag taactttggt gtaaatgctt cctgtttttc tgccacaagc cctttggtct
1321 tacccactac ctcagagcac actgctaaga aaatgaaagc caccaatgag cccagcctga
1381 cacatatgga ctgctcgaca gagcagcctg ggagcatcct gggccccgaa tgtgcctcct
1441 gcaaaagagt attttctccc tacttcaaaa aggagccggt gtaccagctg ccctgcggcc
1501 acctcctgtg ccgaccctgc ctgggtgaga agcaacgctc cctgcccatg acgtgcacag
1561 cctgccagcg gccggttgct agccaagacg tgctgcgggt ccacttctga gtgactgacc
1621 tccactggag gagacccatt gctgggagga gctgaggggg aacaggagca gggccacagc
1681 acccctgagg tctggccagg ccccaggcac agagctgcct gctccctccc ggggctcttc
1741 ttcatcacct cacggtatag cacattgctt ctgcgctggt ggcaataggg caacaaagcc
1801 ataggccaga gggcgggggg atgtccctgc ctccctgcca ccccccctgc ctgagcccag
1861 gacccactgg agccagcccc accctaggca ggaagacccc tgctgagggc ccccccgtgc
1921 agtccgcata cccccctgtc cagcagggca ctgtgggtgg ctcaccctag attgtggccc
1981 agatctcagg agtctctgcc ttcagggtca tccaaaagtg gaccttggga gcagtggggg
2041 tgtctgtgga gtgcatgact cagccccccg actcgcagcc ttaataaagc gatggttgac
2101 gtcaaaaaaa aaaaaaaaa
//