LOCUS BC046119 2473 bp mRNA linear HUM 14-SEP-2006
DEFINITION Homo sapiens SAFB-like, transcription modulator, mRNA (cDNA clone
IMAGE:6196843), partial cds.
ACCESSION BC046119
VERSION BC046119.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2473)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2473)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (31-JAN-2003) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Dr. James R. Lupski
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 107 Row: o Column: 14
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 63176610.
FEATURES Location/Qualifiers
source 1..2473
/db_xref="H-InvDB:HIT000098263"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:6196843"
/tissue_type="Peripheral Nervous System, sympathetic
trunk"
/clone_lib="Lupski_sympathetic_trunk"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene <1..2473
/gene="SLTM"
/gene_synonym="FLJ10005"
/gene_synonym="FLJ13213"
/gene_synonym="Met"
/db_xref="GeneID:79811"
/db_xref="HGNC:HGNC:20709"
CDS <1..1511
/gene="SLTM"
/gene_synonym="FLJ10005"
/gene_synonym="FLJ13213"
/gene_synonym="Met"
/codon_start=3
/product="SLTM protein"
/protein_id="AAH46119.3"
/db_xref="GeneID:79811"
/db_xref="HGNC:HGNC:20709"
/translation="SGQTSESIKKSEEKKRISSKSPGHMVILDQTKGDHCRPSRRGRY
EKIHGRSKEKERASLDKKRDKDYRRKEILPFEKMKEQRLREHLVRFERLRRAMELRRR
REIAERERRERERIRIIREREERERLQRERERLEIERQKLERERMERERLERERIRIE
QERRKEAERIAREREELRRQQQQLRYEQEKRNSLKRPRDVDHRRDDPYWSENKKLSLD
TDARFGHGSDYSRQQNRFNDFDHRERGRFPESSAVQSSSFERRDRFVGQSEGKKARPT
ARREDPSFERYPKNFSDSRRNEPPPPRNELRESDRREVRGERDERRTVIIHDRPDITH
PRHPREAGPNPSRPTSWKSEGSMSTDKRETRVERPERSGREVSGHSVRGAPPGNRSSA
SGYGSREGDRGVITDRGGGSQHYPEERHVVERHGRDTSGPRKEWHGPPSQGPSYHDTR
RMGDGRAGAGMITQHSSNASPINRIVQISGNSMPRGSGSGFKPFKGGPPRRF"
BASE COUNT 808 a 424 c 621 g 620 t
ORIGIN
1 caagtggcca aacatcagaa tcgattaaaa aaagtgaaga aaagaagcga ataagttcca
61 agagtccagg acatatggta atactagacc aaactaaagg agatcattgt agaccatcaa
121 gaagaggaag atatgagaaa attcatggaa gaagtaagga aaaggagaga gctagtctag
181 ataaaaaaag agataaagac tacagaagga aagagatctt gccttttgaa aagatgaagg
241 aacaaaggtt gagagaacat ttagttcgtt ttgaaaggct gcgacgagca atggaacttc
301 gaagacgaag agagattgca gagagagagc gtcgagagcg agaacgcatt agaataattc
361 gtgaacggga agaacgggaa cgcttacaga gagagagaga gcgcctagaa attgaaaggc
421 aaaaactaga gagagagaga atggaacgcg aacgcttgga aagggaacgc attcgtattg
481 aacaggaacg tcgtaaggaa gctgaacgga ttgctcgaga aagagaggaa ctcagaaggc
541 aacaacagca gcttcgttat gaacaagaaa aaaggaattc cttgaaacgc ccacgtgatg
601 tagatcatag gcgagatgat ccttactgga gcgagaataa aaagttgtct ctagatacag
661 atgcacgatt tggccatgga tccgactact ctcgccaaca gaacagattt aatgactttg
721 atcaccgaga gaggggcagg tttcctgaga gttcagcagt acagtcttca tcttttgaaa
781 ggcgggatcg ctttgttggt caaagtgagg ggaaaaaagc acgacctact gcacgaaggg
841 aagatccaag cttcgaaaga tatcccaaaa atttcagtga ctccagaaga aatgagcctc
901 caccaccaag aaatgaactt agagaatcag acaggcgaga agtacgaggg gagcgagacg
961 aaaggagaac ggtgattatt catgacaggc ctgatatcac tcatcctaga catcctcgag
1021 aggcagggcc caatccttcc agacccacca gctggaaaag tgaaggaagc atgtccactg
1081 acaaacggga aacaagagtt gaaaggccag aacgatctgg gagagaagta tcagggcaca
1141 gtgtgagagg cgctccccct gggaatcgta gcagcgcttc ggggtacggg agcagagagg
1201 gagacagagg agtcatcaca gaccgaggag gtggatcaca gcactatcct gaggagcgac
1261 atgtggttga acgccatgga cgggacacaa gcggaccaag gaaagagtgg catggtccac
1321 cctctcaagg gcctagctat catgatacga ggcgaatggg tgacggccgg gcaggagcag
1381 gcatgataac ccaacattca agtaacgcat ccccaattaa tagaattgta caaatcagtg
1441 gcaattccat gccaagagga agtggctccg gatttaagcc atttaagggt ggacctccgc
1501 gacgattctg aaaatgagct ctctgccaag gttttaagat aatttattga aatctcctgt
1561 aaactttact tgactactta tgaagaggac ctctgacttg cttgagagtt ctgtcagact
1621 tttcttttta aaaatttaac atgattgctt ttctcaattt tggagaagat gtttaaatag
1681 ttctgttgta acttttaata gttttgtgta tcattcaact ttttttcttg cagcaccgag
1741 gcacatttga aaagatggaa ttgaagtcgt tttgtttaac gctgtgtgaa tataaagagt
1801 agtttgcagc tgtgtggtag tggtttaatt tgcagcctta gctctgtggt gtctggctct
1861 agagttactt ctttttacca agcattttca gcctccattt tgaaggctgt ctacacttaa
1921 gaagtcttag ctgtctaatt tttagagaat aagattgttc attgcatttc tgagtattat
1981 gtaacctatt tttgcagaag gtactgttac attaagtgca tctgtgtatc ctggtttaaa
2041 aaaatgtaat cttttttgaa ataaaccttc atattctgta tagttgctaa agtgttgaga
2101 acctttttaa ttgtaaaatg agaaccgatt ttcagtttag tgtagcagca cacttgttca
2161 ggtttgcatg gtatgaaacc aaatagattc atgaaacctt ggccatgagg tttgtttcac
2221 aaggttctta gaccgagttg tgcaggtaag tgcactttta ggtaatctgc actgtttgtt
2281 tgatggataa attccatctc tgggaattgt gtgggtatta atgtttccat gttcccaact
2341 atgttgagaa gtggaaaaaa acccaggttc tagatgggtg aatcagttgg gttttgtaaa
2401 tacttgtatg tggggaagac attgttgtct ttttgtgaaa ataaaaatcc acacctggaa
2461 aaaaaaaaaa aaa
//