LOCUS BC046112 1169 bp mRNA linear HUM 18-MAR-2009
DEFINITION Homo sapiens Epstein-Barr virus induced 3, mRNA (cDNA clone
MGC:57547 IMAGE:5748376), complete cds.
ACCESSION BC046112
VERSION BC046112.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1169)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1169)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (31-JAN-2003) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Life Technologies, Inc.
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 107 Row: i Column: 9
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 14577916.
FEATURES Location/Qualifiers
source 1..1169
/db_xref="H-InvDB:HIT000052991"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:57547 IMAGE:5748376"
/tissue_type="Pancreas, Spleen, adult pooled"
/clone_lib="NIH_MGC_120"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..1169
/gene="EBI3"
/gene_synonym="IL27B"
/db_xref="GeneID:10148"
/db_xref="HGNC:HGNC:3129"
/db_xref="MIM:605816"
CDS 8..697
/gene="EBI3"
/gene_synonym="IL27B"
/codon_start=1
/product="Epstein-Barr virus induced 3"
/protein_id="AAH46112.1"
/db_xref="GeneID:10148"
/db_xref="HGNC:HGNC:3129"
/db_xref="MIM:605816"
/translation="MTPQLLLALVLWASCPPCSGRKGPPAALTLPRVQCRASRYPIAV
DCSWTLPPAPNSTSPVSFIATYRLGMAARGHSWPCLQQTPTSTSCTITDVQLFSMAPY
VLNVTAVHPWGSSSSFVPFITEHIIKPDPPEGVRLSPLAERQLQVQWEPPGSWPFPEI
FSLKYWIRYKRQGAARFHRVGPIEATSFILRAVRPRARYYVQVAAQDLTDYGELSDWS
LPATATMSLGK"
BASE COUNT 255 a 376 c 301 g 237 t
ORIGIN
1 cgcagccatg accccgcagc ttctcctggc ccttgtcctc tgggccagct gcccgccctg
61 cagtggaagg aaagggcccc cagcagctct gacactgccc cgggtgcaat gccgagcctc
121 tcggtacccg atcgccgtgg attgctcctg gaccctgccg cctgctccaa actccaccag
181 ccccgtgtcc ttcattgcca cgtacaggct cggcatggct gcccggggcc acagctggcc
241 ctgcctgcag cagacgccaa cgtccaccag ctgcaccatc acggatgtcc agctgttctc
301 catggctccc tacgtgctca atgtcaccgc cgtccacccc tggggctcca gcagcagctt
361 cgtgcctttc ataacagagc acatcatcaa gcccgaccct ccagaaggcg tgcgcctaag
421 ccccctcgct gagcgccagc tacaggtgca gtgggagcct cccgggtcct ggcccttccc
481 agagatcttc tcactgaagt actggatccg ttacaagcgt cagggagctg cgcgcttcca
541 ccgggtgggg cccattgaag ccacgtcctt catcctcagg gctgtgcggc cccgagccag
601 gtactacgtc caagtggcgg ctcaggacct cacagactac ggggaactga gtgactggag
661 tctccccgcc actgccacaa tgagcctggg caagtagcaa gggcttcccg ctgcctccag
721 acagcacctg ggtcctcgcc accctaagcc ccgggacacc tgttggaggg cggatgggat
781 ctgcctagcc tgggctggag tccttgcttt gctgctgctg agctgccggg caacctcaga
841 tgaccgactt ttccctttga gcctcagttt ctctagctga gaaatggaga tgtactactc
901 tctcctttac ctttaccttt accacagtgc agggctgact gaactgtcac tgtgagatat
961 tttttattgt ttaattagaa aagaattgtt gttgggctgg gcgcagtgga tcgcacctgt
1021 aatcccagtc actgggaagc cgacgtggga gggtagcttg aggccaggag ctcgaaacca
1081 gtccgggcca cacagcaaga ccccatctct aaaaaattaa tataaatata aaataaatta
1141 aaaaaaaaaa aaaaaaaaaa aaaaaaaaa
//