LOCUS BC046111 1578 bp mRNA linear HUM 08-SEP-2006
DEFINITION Homo sapiens chromosome 4 open reading frame 35, mRNA (cDNA clone
MGC:57543 IMAGE:5171504), complete cds.
ACCESSION BC046111
VERSION BC046111.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1578)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1578)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (31-JAN-2003) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Life Technologies, Inc.
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 107 Row: c Column: 16
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 31543302.
FEATURES Location/Qualifiers
source 1..1578
/db_xref="H-InvDB:HIT000052990"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:57543 IMAGE:5171504"
/tissue_type="Brain, adult medulla"
/clone_lib="NIH_MGC_119"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..1578
/gene="C4orf35"
/gene_synonym="FLJ32897"
/gene_synonym="NYD-SP26"
/db_xref="GeneID:85438"
/db_xref="HGNC:HGNC:30710"
CDS 49..1236
/gene="C4orf35"
/gene_synonym="FLJ32897"
/gene_synonym="NYD-SP26"
/codon_start=1
/product="chromosome 4 open reading frame 35"
/protein_id="AAH46111.1"
/db_xref="GeneID:85438"
/db_xref="HGNC:HGNC:30710"
/translation="MAEDGLPKIYSHPPTESSKTPTAATIFFGADNAIPKSETTITSE
GDHVTSVNEYMLESDFSTTTDNKLTAKKEKLKSEDDMGTDFIKSTTHLQKEITSLTGT
TNSITRDSITEHFMPVKIGNISSPVTTVSLIDFSTDIAKEDILLATIDTGDAEISITS
EVSGTLKDSSAGVADAPAFPRKKDEADMSNYNSSIKSNVPADEAVQVTDSIIPEAEIP
PAPEESFTTIPDITALEEEKITEIDLSVLEDDTSAVATLTDSDEKFITVFELTTSAEK
DKDKREDTLLTDEETTEGASIGMERDTANEAETHSVLLTAVESRYDFVVPASIATNLV
EESSTEEDLSETDNTETVPKITEPFSGTTSVLDTPDYKEDTSTTETDIFELLKEEPDE
FMI"
BASE COUNT 578 a 329 c 273 g 398 t
ORIGIN
1 tgagtccaga agcaagacct gtgagagtgc acagtgccac ttcgccccat ggctgaagat
61 ggtttgccca aaatttattc tcatcctcca acagaaagca gtaaaacacc aactgcagca
121 accattttct ttggggctga caatgctatt cccaaatcag aaacaactat tacttcagaa
181 ggagaccacg tcacttcagt aaatgaatat atgctagaaa gcgatttttc aacaactaca
241 gacaacaaac tgacagctaa aaaggaaaaa ctcaaatcag aagatgatat ggggaccgac
301 tttattaagt caacaactca cctacagaaa gaaattacct ctctgactgg cactacaaac
361 tccataacaa gagactctat taccgaacat ttcatgccag tgaaaattgg gaatatttca
421 tcaccagtta ctactgtttc tttaatagat ttttccactg acatagcaaa agaagatatc
481 ctcttagcta ccattgacac aggagatgca gagatctcaa taacctctga agtctctggc
541 acactaaagg acagcagtgc tggtgttgct gacgctcctg cctttccacg taaaaaggat
601 gaagctgata tgagcaatta taattcctcc atcaaatcca atgtccctgc tgatgaggct
661 gtccaggtca ctgattccat tattcctgag gctgaaatcc ctcctgctcc tgaagaaagc
721 ttcactacta ttccagacat aactgccctt gaagaagaga aaataaccga aattgaccta
781 agtgttttag aagatgacac cagtgctgtg gctacattaa ctgactctga tgagaagttt
841 atcactgtgt ttgaactcac tacctctgct gaaaaagaca aagataaacg ggaagatact
901 ctgctaactg atgaagaaac taccgaggga gccagtattg ggatggagag agatactgca
961 aatgaagcag agacccattc tgttttgctt actgctgttg aatccagata tgacttcgtt
1021 gtccctgcat caatagctac aaacctagtg gaagaatcat ctacagaaga agatttgtct
1081 gaaactgata atacagagac tgtacctaag atcactgagc cattttctgg aactacctct
1141 gtattagata ccccagacta taaggaagac acctccacaa ctgaaacgga tatctttgaa
1201 ctactgaaag aagaacccga tgagttcatg atttaaaagc aacaaaaggg ataccatgta
1261 gaattgtgca atagtctagc cagctagcct taacatctaa gaaatttttc caacaagcaa
1321 aaacctttag aaatgaaaga atgtgggcat ttaaggtctt aaacactgaa tatcacactc
1381 ttcttatgac tcttgttagc gattcaagga cataaatctt cattcttttc tggcacagac
1441 tacttaaatg ggtctgtttt cactttgctc atttttcttc aataaatctt tttggcaagc
1501 aactgaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa
1561 aaaaaaaaaa aaaaaaaa
//