LOCUS BC046105 2106 bp mRNA linear HUM 06-OCT-2005 DEFINITION Homo sapiens SNW domain containing 1, mRNA (cDNA clone IMAGE:5123391), partial cds. ACCESSION BC046105 VERSION BC046105.2 KEYWORDS . SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 2106) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 2106) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (31-JAN-2003) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT On Sep 16, 2003 this sequence version replaced BC046105.1. Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: ATCC cDNA Library Preparation: Life Technologies, Inc. cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Sequencing Group at the Stanford Human Genome Center, Stanford University School of Medicine, Stanford, CA 94305 Web site: http://www-shgc.stanford.edu Contact: (Dickson, Mark) mcd@paxil.stanford.edu Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers, R. M. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAK Plate: 107 Row: c Column: 10 This clone was selected for full length sequencing because it passed the following selection criteria: matched mRNA gi: 18860912. FEATURES Location/Qualifiers source 1..2106 /db_xref="H-InvDB:HIT000052986" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="IMAGE:5123391" /tissue_type="Cervix, carcinoma" /clone_lib="NIH_MGC_12" /lab_host="DH10B" /note="Vector: pCMV-SPORT6" gene <1..2106 /gene="SNW1" /gene_synonym="Bx42" /gene_synonym="NCOA-62" /gene_synonym="Prp45" /gene_synonym="PRPF45" /gene_synonym="SKIP" /db_xref="GeneID:22938" /db_xref="HGNC:HGNC:16696" /db_xref="IMGT/GENE-DB:16696" /db_xref="MIM:603055" CDS <1..1598 /gene="SNW1" /gene_synonym="Bx42" /gene_synonym="NCOA-62" /gene_synonym="Prp45" /gene_synonym="PRPF45" /gene_synonym="SKIP" /codon_start=3 /product="SNW1 protein" /protein_id="AAH46105.2" /db_xref="GeneID:22938" /db_xref="HGNC:HGNC:16696" /db_xref="IMGT/GENE-DB:16696" /db_xref="MIM:603055" /translation="FLPAPTQLSQDQLEAEEKARSQRSRQTSLVSSRREPPPYGYRKG WIPRLLEDFGDGGAFPEIHVAQYPLDMGRKKKMSNALAIQVDSEGKIKYDAIARQGQS KDKVIYSKYTDLVPKEVMNADDPDLQRPDEEAIKEITEKTRVALEKSVSQKVAAAMPV RAADKLAPAQYIRYTPSQQGVAFNSGAKQRVIRMVEMQKDPMEPPRFKINKKIPRGPP SPPAPVMHSPSRKMTVKEQQEWKIPPCISNWKNAKGYTIPLDKRLAADGRGLQTVHIN ENFAKLAEALYIADRKAREAVEMRAQVERKMAQKEKEKHEEKLREMAQKARERRAGIK THVEKEDGEARERDEIRHDRRKERQHDRNLSRAAPDKRSKLQRNENRDISEVIALGVP NPRTSNEVQYDQRLFNQSKGMDSGFAGGEDEIYNVYDQAWRGGKDMAQSIYRPSKNLD KDMYGDDLEARIKTNRFVPDKEFSGSDRRQRGREGPVQFEEDPFGLDKFLEEAKQHGG SKRPSDSSRPKEHEHEGKKRRKE" BASE COUNT 701 a 409 c 515 g 481 t ORIGIN 1 gctttttacc tgcacctact cagctatctc aggaccagct tgaggctgaa gaaaaggcaa 61 gatcccagag atcacggcag acctcactgg tctcctcccg aagagaacct cccccgtacg 121 gataccggaa aggctggata cctcggttat tagaggattt tggagatgga ggtgcttttc 181 cagagatcca tgtggcccag tatccactgg atatgggacg aaagaaaaaa atgtcgaatg 241 cgctggccat tcaggtggat tctgaaggaa aaattaaata tgatgcaatt gctcgacaag 301 gacagtcaaa agacaaggtc atttatagca aatacactga cctggttcca aaggaggtta 361 tgaatgcaga tgatccagac ctgcaaaggc ccgatgaaga agctattaaa gagataacag 421 aaaagacaag agtagcctta gaaaaatctg tatcacagaa ggtcgccgca gccatgccag 481 ttcgagcagc tgacaaattg gctcctgctc agtatatccg atacacacca tctcagcaag 541 gagtggcatt caactctgga gctaaacaga gggttattcg gatggtagaa atgcagaaag 601 atccaatgga gcctccaagg ttcaagatta ataagaaaat tccccgggga ccaccttctc 661 ctcctgcgcc tgtcatgcat tctcctagcc gaaagatgac tgtaaaggaa caacaagagt 721 ggaagattcc tccttgtatt tctaactgga aaaatgcaaa gggttataca attccattag 781 acaaacgtct ggctgctgat ggaagaggac tacagacagt acacataaat gaaaatttcg 841 ccaaattggc agaagccctc tacattgctg atcggaaggc tcgtgaagct gtggaaatgc 901 gtgcccaagt agagagaaaa atggctcaga aagaaaagga aaaacatgaa gagaaactta 961 gagaaatggc ccagaaagcc agggagagaa gagctgggat caaaactcat gtggaaaaag 1021 aggatgggga ggcacgtgag agggatgaaa tccggcatga caggcgaaaa gagagacagc 1081 atgaccggaa tctttccagg gcagctcctg ataagaggtc gaaacttcag agaaatgaaa 1141 atcgggatat cagtgaagtt attgctctcg gtgttcctaa tcctcggact tccaatgaag 1201 ttcagtatga ccaaaggctc ttcaaccaat ccaagggtat ggacagtgga tttgcaggtg 1261 gagaagatga aatttataat gtttatgatc aagcctggag aggtggtaaa gatatggccc 1321 agagtattta taggcccagt aaaaatctgg acaaggacat gtatggtgat gacctagaag 1381 ccagaataaa gaccaacaga tttgttcccg acaaggagtt ttctggttca gaccgtagac 1441 agagaggccg agaaggacca gtgcagtttg aggaagatcc ttttggtttg gacaagtttt 1501 tggaagaagc caaacagcat ggtggctcta aaagaccctc agatagcagc cgccccaagg 1561 aacacgagca tgaaggcaag aagaggagga aggaataggc acaggtctct ccaaagtgaa 1621 tgaactctta cccataaccc taatgatgca agtcatatgg gggaacactt tgtaaatggt 1681 caggataaaa accaaatctg ggtgccagat cccagcacta ctttttatta ctggagaaat 1741 gggggggata gaaaattcta ctttgaatta tttagttttt tttaaagagt gggttgtgtt 1801 tgtgcttctc ccacctttca gcatttatag aacatgctgc cccacataca aagtcaagac 1861 cacttacttt tatgtgacac tagtagtttg gggttaatgt tttgtgtaag aacagctgca 1921 tatgagtaaa gttaccccaa ccacagtgag gaggaagatg ttcacatact ggaactgtcc 1981 tgccaaataa attttgcccc tattgtgctc tgttttaatt tggagtgggc aaagtaacct 2041 cttgcttggt gcaactattt gtttcaaata aaaacattta gacaaaaaaa aaaaaaaaaa 2101 aaaaaa //