LOCUS BC046103 1691 bp mRNA linear HUM 09-MAR-2007
DEFINITION Homo sapiens parvin, beta, mRNA (cDNA clone MGC:57521
IMAGE:5763848), complete cds.
ACCESSION BC046103
VERSION BC046103.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1691)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1691)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (31-JAN-2003) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Life Technologies, Inc.
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 107 Row: j Column: 12
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 51477694.
FEATURES Location/Qualifiers
source 1..1691
/db_xref="H-InvDB:HIT000052985"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:57521 IMAGE:5763848"
/tissue_type="Brain, adult, 6 pooled whole brains"
/clone_lib="NIH_MGC_114"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..1691
/gene="PARVB"
/gene_synonym="CGI-56"
/db_xref="GeneID:29780"
/db_xref="HGNC:HGNC:14653"
/db_xref="MIM:608121"
CDS 31..1125
/gene="PARVB"
/gene_synonym="CGI-56"
/codon_start=1
/product="parvin, beta"
/protein_id="AAH46103.2"
/db_xref="GeneID:29780"
/db_xref="HGNC:HGNC:14653"
/db_xref="MIM:608121"
/translation="MSSAPRSPTPRPRRMKKDESFLGKLGGTLARKRRAREVSDLQEE
GKNAINSPMSPALADVHPEDTQLEENEERTMIDPTSKEDPKFKELVKVLLDWINDVLV
EERIIVKQLEEDLYDGQVLQKLLEKLAGCKLNVAEVTQSEIGQKQKLQTVLEAVHDLL
RPRGWALRWSVDSIHGKNLVAILHLLVSLAMHFRAPIRLPEHVTVQVVVVRKREGLLH
SSHISEELTTTTEMMMGRFERDAFDTLFDHAPDKLSVVKKSLITFVNKHLNKLNLEVT
ELETQFADGVYLVLLMGLLEDYFVPLHHFYLTPESFDQKVHNVSFAFELMLDGGLKKP
KARPEDVVNLDLKSTLRVLYNLFTKYKNVE"
BASE COUNT 386 a 477 c 486 g 342 t
ORIGIN
1 tgcgcccgcc gccggcccca cgcgcggccc atgtcctccg cgccgcgctc gcccaccccg
61 cggccccgca ggatgaagaa ggacgagtcg ttcctgggca agctgggcgg caccctggcc
121 aggaagcgga gggcgcgcga ggtgagtgac ctgcaggaag aaggcaagaa tgccatcaac
181 tcaccgatgt cccccgccct ggcggatgtt caccctgaag acacccagct cgaggagaac
241 gaggagcgca cgatgattga ccccacttcc aaggaagacc ccaagttcaa ggaactggtc
301 aaggtcctcc tcgactggat taatgacgtg ctggtggagg agaggatcat tgtgaagcag
361 ctggaggaag acctgtatga cggccaggtg ctgcagaagc tcttggaaaa actggcaggg
421 tgcaagctga atgtggctga ggtgacacag tccgaaatag ggcagaaaca gaagctgcag
481 acggtgctgg aagcagtaca tgacctgctg cggccccgag gctgggcgct ccggtggagc
541 gtggactcaa ttcacgggaa gaacctggtg gccatcctcc acctgctggt ctctctggcc
601 atgcacttca gggcccccat ccgccttcct gagcatgtaa cggtgcaggt ggtggtcgtg
661 cggaaacggg aaggcctgct gcattccagc cacatctcgg aggagctgac cacaactaca
721 gagatgatga tgggccggtt cgagcgggat gccttcgaca cgctgttcga ccacgccccg
781 gataagctca gcgtggtgaa gaagtctctc atcacttttg tgaacaagca cctgaacaag
841 ctgaatttgg aggtgacgga actggagacc cagtttgcag atggcgtgta cctggttctg
901 ctcatgggcc ttctggaaga ctactttgtt cctctccacc acttctacct gactccggaa
961 agcttcgatc agaaggtcca caatgtgtcc tttgcctttg agctgatgct ggacggaggc
1021 ctcaagaaac ccaaggctcg tcctgaagac gtggttaact tggacctcaa atccaccctg
1081 agggttcttt acaacctgtt caccaagtac aagaacgtgg agtgacgggg gagctgtgga
1141 tggtggcagg agtgtcccag caagaaaggc ggcatccgtc tgtgccctgt gcctttccag
1201 ggagccaggc gccatgggct tctggtccaa gctgtgttga ctgtcatccc caccccaccc
1261 ctacctcacg cctgccccac cccctgcctc ttttggttgt tgttcttaat ctcctctcca
1321 tgtagttccc agtgggcaag agcctttgaa aatgcaggat tctaaacact cgtgcttgcg
1381 tttgaagcct cgcgtcactc agtcgcgtgg gatgatgagt ccgttgttgt ctgccttggc
1441 cgaaagatga aaaaaagcct gaaccccaac ccccagctgg ttgagagcac cctgcattct
1501 gcctcatggt gcagttagcg atcacaggcc ttcagaagta caacatcagc tcagcaggaa
1561 cgccggctcc ccgaggaccc aggcttgacg attcaccggg gatctcctgg gctgggctct
1621 ccttggaagt gaggcctttt attaaaaata aaagggtttt gcagtttgaa aaaaaaaaaa
1681 aaaaaaaaaa a
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