LOCUS       BC045667                4129 bp    mRNA    linear   HUM 24-JUL-2006
DEFINITION  Homo sapiens sorting nexin 13, mRNA (cDNA clone MGC:44494
            IMAGE:5298570), complete cds.
ACCESSION   BC045667
VERSION     BC045667.1
KEYWORDS    MGC.
SOURCE      Homo sapiens (human)
  ORGANISM  Homo sapiens
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
            Catarrhini; Hominidae; Homo.
REFERENCE   1  (bases 1 to 4129)
  AUTHORS   Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
            Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
            Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
            Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
            Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
            Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
            Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
            Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
            Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
            McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
            Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
            Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
            Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
            Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
            Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
            Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
            Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
            Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
  CONSRTM   Mammalian Gene Collection Program Team
  TITLE     Generation and initial analysis of more than 15,000 full-length
            human and mouse cDNA sequences
  JOURNAL   Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
   PUBMED   12477932
REFERENCE   2  (bases 1 to 4129)
  CONSRTM   NIH MGC Project
  TITLE     Direct Submission
  JOURNAL   Submitted (31-JAN-2003) National Institutes of Health, Mammalian
            Gene Collection (MGC), Bethesda, MD 20892-2590, USA
  REMARK    NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT     Contact: MGC help desk
            Email: cgapbs-r@mail.nih.gov
            Tissue Procurement: Miklos Palkovits, M.D., Ph.D.
            cDNA Library Preparation: Michael J. Brownstein (NHGRI) &  Shiraki
            Toshiyuki and Piero Carninci (RIKEN)
            cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
            DNA Sequencing by: Sequencing Group at the Stanford Human Genome
            Center, Stanford University School of Medicine, Stanford, CA  94305
            Web site:       http://www-shgc.stanford.edu
            Contact:  (Dickson, Mark) mcd@paxil.stanford.edu
            Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
            R. M.
            
            Clone distribution: MGC clone distribution information can be found
            through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
            Series: IRAK Plate: 77 Row: a Column: 18
            This clone was selected for full length sequencing because it
            passed the following selection criteria: matched mRNA gi: 23238242.
FEATURES             Location/Qualifiers
     source          1..4129
                     /db_xref="H-InvDB:HIT000052961"
                     /organism="Homo sapiens"
                     /mol_type="mRNA"
                     /db_xref="taxon:9606"
                     /clone="MGC:44494 IMAGE:5298570"
                     /tissue_type="Testis"
                     /clone_lib="NIH_MGC_97"
                     /lab_host="DH10B"
                     /note="Vector: pBluescriptR"
     gene            1..4129
                     /gene="SNX13"
                     /gene_synonym="KIAA0713"
                     /gene_synonym="RGS-PX1"
                     /db_xref="GeneID:23161"
                     /db_xref="HGNC:HGNC:21335"
                     /db_xref="MIM:606589"
     CDS             184..3057
                     /gene="SNX13"
                     /gene_synonym="KIAA0713"
                     /gene_synonym="RGS-PX1"
                     /codon_start=1
                     /product="sorting nexin 13"
                     /protein_id="AAH45667.1"
                     /db_xref="GeneID:23161"
                     /db_xref="HGNC:HGNC:21335"
                     /db_xref="MIM:606589"
                     /translation="MLTEASLSIWGWGSLGIVLFLITFGPFVIFYLTFYILCFVGGGL
                     VVTLLFGKTNSEKYLEQCEHSFLPPTSPGVPKCLEEMKREARTIKIDRRLTGANIIDE
                     PLQQVIQFSLRDYVQYWYYTLSDDESFLLEIRQTLQNALIQFATRSKEIDWQPYFTTR
                     IVDDFGTHLRVFRKAQQKITEKDDQVKGTAEDLVDTFFEVEVEMEKEVCRDLVCTSPK
                     DEEGFLRDLCEVLLYLLLPPGDFQNKIMRYFVREILARGILLPLINQLSDPDYINQYV
                     IWMIRDSNCNYEAFMNIIKLSDNIGELEAVRDKAAEELQYLRSLDTAGDDINTIKNQI
                     NSLLFVKKVCDSRIQRLQSGKEINTVKLAANFGKLCTVPLDSILVDNVALQFFMDYMQ
                     QTGGQAHLFFWMTVEGYRVTAQQQLEVLLSRQRDGKHQTNQTKGLLRAAAVGIYEQYL
                     SEKASPRVTVDDYLVAKLADTLNHEDPTPEIFDDIQRKVYELMLRDERFYPSFRQNAL
                     YVRMLAELDMLKDPSFRGSDDGDGESFNGSPTGSINLSLDDLSNVSSDDSVQLHAYIS
                     DTGVCNDHGKTYALYAITVHRRNLNSEEMWKTYRRYSDFHDFHMRITEQFESLSSILK
                     LPGKKTFNNMDRDFLEKRKKDLNAYLQLLLAPEMMKASPALAHYVYDFLENKAYSKGK
                     GDFARKMDTFVNPLRNSMRNVSNAVKSLPDNLAEGMTKMSDNMGKMSERLGQDIKQSF
                     FKVPPLIPKTDSDPEHRRVSAQLDDNVDDNIPLRVMLLLMDEVFDLKERNQWLRRNIK
                     NLLQQLIRATYGDTINRKIVDHVDWMTSPEQVADSVKRFRDAFWPNGILAEAVPCRDK
                     SIRMRTRVAGKTKLLAIMPDELKHIIGAETTRKGILRVFEMFQHNQLNRRMVYVFLEG
                     FLETLFPQYKFRELFNKLHSRSKQMQKYKQKLQTTQAPSLQKR"
BASE COUNT         1333 a          729 c          856 g         1211 t
ORIGIN      
        1 ggctcgtccg tcgcgagcga ccgggccgag gggaggccag cgaagccgag taaaaccgcc
       61 gcccgggaga agactgaagg agcagttgcc gccgttggcg gcggcccgag cagttttcgc
      121 tgctgctacg gctgttgcca tgaggcgagg ctagggagga cctcacttcc ccggggtgta
      181 ataatgttaa ctgaggccag tctatccata tggggatggg gaagccttgg cattgtcctt
      241 tttctgataa cctttggacc ctttgtaata ttttatttga cattttatat cctctgcttt
      301 gtgggtgggg gtttagtggt tactctcctg tttggaaaaa caaactcaga gaagtaccta
      361 gaacagtgtg aacactcatt tcttcctcca acatcacctg gggttcctaa gtgcttagaa
      421 gaaatgaaac gggaagccag gactattaag attgatagaa gattgacggg tgccaatata
      481 attgatgaac ctctccagca agttatccag ttttccttga gggattatgt ccagtattgg
      541 tattatacac taagcgatga tgaatctttt cttcttgaaa ttaggcagac tcttcaaaac
      601 gcactcattc agtttgctac taggtcaaaa gaaatagact ggcaacctta ttttactaca
      661 cgcattgtag atgactttgg cacacactta cgagtattca gaaaggctca acagaaaata
      721 acagagaaag atgatcaagt gaaaggtaca gcagaagatc ttgtagatac cttctttgaa
      781 gttgaagttg aaatggagaa ggaggtttgc cgtgatctag tgtgcacttc ccccaaagat
      841 gaagaaggat tcctaaggga tttgtgtgag gtcttactat atttattgct acctcctgga
      901 gatttccaga acaagatcat gcgatacttt gtcagggaaa tccttgcacg aggaattctt
      961 cttccattaa taaatcaact cagtgatcct gattatatta atcagtatgt catatggatg
     1021 atccgtgatt ctaactgcaa ctatgaggcc tttatgaaca ttattaaatt gagtgacaat
     1081 attggagagc tagaagcagt cagagataag gcagcagaag aattacagta tcttagatct
     1141 ctagatacag ctggtgatga tatcaacact atcaaaaatc aaataaatag cttactattc
     1201 gtaaagaagg tatgtgactc aagaatacag cgattgcagt caggcaaaga aataaatact
     1261 gtgaaacttg cagcaaactt tgggaaactt tgcacagtcc ccctggacag cattcttgta
     1321 gacaatgttg cactacaatt ttttatggat tacatgcagc aaactggagg tcaagcacat
     1381 ctattctttt ggatgacagt ggaaggatac cgggttaccg cccaacagca gctagaagtt
     1441 ttattaagtc gtcagagaga tggaaaacat caaaccaacc aaaccaaagg tcttttaaga
     1501 gcagctgctg ttggaattta tgaacagtat ttatcagaaa aggcatctcc aagagttact
     1561 gttgatgact atttagtagc aaaattagca gatactttga atcatgaaga tccaacccct
     1621 gaaatctttg atgacattca aagaaaggta tatgaattga tgctacgaga tgaaagattt
     1681 tatccttcct tcagacagaa tgcactttat gtgcgcatgt tagctgagct tgacatgtta
     1741 aaagatccta gtttcagagg atccgatgat ggggatggag aatcttttaa tgggtctcct
     1801 acaggaagca taaatttgtc tttagatgac ctttcaaatg tttcttctga tgactcagta
     1861 caacttcatg cctacatttc agacacaggc gtttgtaatg atcatggcaa gacatatgca
     1921 ttatatgcca tcactgtaca ccggcgcaac ctaaacagtg aggagatgtg gaaaacctat
     1981 cgtcgttata gtgacttcca tgacttccac atgagaatca ctgaacagtt tgaaagtctc
     2041 tcaagcatat tgaaacttcc tggaaaaaag acttttaata atatggatag agatttttta
     2101 gaaaagagaa aaaaggatct aaatgcatat ttgcagttac tgttagctcc tgaaatgatg
     2161 aaggcatccc ccgctttagc tcactatgtg tatgatttcc ttgagaacaa agcctacagt
     2221 aaaggaaaag gggattttgc tcgcaagatg gacacttttg taaatccact tcgcaattca
     2281 atgaggaatg tttcaaatgc agttaaatcc cttcctgata acttggcaga gggaatgact
     2341 aaaatgtcag acaacatggg caaaatgtca gaaagattag gtcaagacat aaagcaatca
     2401 ttttttaagg tgcctccttt aattcctaag actgattcag accctgaaca tcgccgagtt
     2461 tcggctcaac ttgacgataa tgtggatgac aatattccac ttagggtaat gctgcttctc
     2521 atggatgaag tattcgactt aaaagaaaga aatcagtggt tgcgaaggaa tatcaaaaac
     2581 ctacttcaac agcttattag agctacatat ggcgatacta ttaatagaaa aatagttgac
     2641 catgttgact ggatgacttc acctgaacaa gtagccgact cagtgaaacg tttcagagat
     2701 gcattttggc caaatggcat tttagcagag gctgttccat gcagagataa aagtattcga
     2761 atgagaacaa gagtagcagg aaaaacgaaa ttacttgcaa ttatgccaga tgagctgaag
     2821 cacattattg gggctgagac aacacggaaa ggtattcttc gtgtttttga aatgtttcag
     2881 cacaaccaat taaataggag aatggtttat gtcttcttgg aaggcttttt agaaacctta
     2941 tttccacagt ataaattccg tgaacttttc aacaaactgc attcacggtc aaagcagatg
     3001 cagaaatata aacagaaact tcaaactact caagcgcctt ctttgcagaa aaggtgacac
     3061 tccactctat gaagctggtg ttcattttgt ccaggactaa tggtatggac agatcttctg
     3121 gggcttaact caaatactgt tgtgtctgca ccagtctttt agtgtctcaa aatagattat
     3181 taatacatcc ataagtctgt ggttcttctc attctcatct ataatccacc actaccaaga
     3241 gagatttctg tgtcttaaat gatttggtgc atattttgca acattgagag aaaactgccc
     3301 ccatctcaag caagaatggc gttggtttct tccatttcaa actaatcagc attctccagc
     3361 aatgacaaag tgccagagtg tatatatgaa agctaaggaa agcacaaaac aatggttcag
     3421 agataaattg gctaatttgt ttaacagttg gagactgtgc aatgtacgac ttggaggagt
     3481 ttgtttggca taatgatttt gtaggtctgt cagcattttg atatattgtg gattagccag
     3541 gtgaatgatc cttgaaacat ctctttcagg tctggagaaa gagacagaat gcccttaaag
     3601 tgtgaaataa ccttatacct gaattacagt tttgtgatat aaaataaagc tgagtataaa
     3661 ataaaaccaa tcaaacacag aatttgattg gatttgttat tcattggtat acaacaattt
     3721 ttattcttat gtgtgcttta agggctgtgt tttgctctta gggtactcaa ttttatgttt
     3781 ccttttggca ttctttgtgc aaaaagaagc atgtggtggc tctcatttaa atttcaaaat
     3841 tattagtttt atctttaaca gattactgat tatacagaag atataattta ttggaagaac
     3901 tgccaaatac attttgtcct tctaaaaata tggaaattta aatagtagtc tggaaagtta
     3961 ccatatgata atttttaatt gtgtgatcta gacatgcctt aggtaactgc agaaatagca
     4021 aattaaatga ttaatgagct tattagtcat agtaaacata cagattccta attctatgac
     4081 agtgtacata tatgaaaata aatgatgaaa aaagaaaaaa aaaaaaaaa
//