LOCUS BC045609 5057 bp mRNA linear HUM 09-JUN-2008 DEFINITION Homo sapiens autophagy/beclin-1 regulator 1, mRNA (cDNA clone MGC:33725 IMAGE:5296472), complete cds. ACCESSION BC045609 VERSION BC045609.1 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 5057) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 5057) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (31-JAN-2003) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: Miklos Palkovits, M.D., Ph.D. cDNA Library Preparation: Michael J. Brownstein (NHGRI) & Shiraki Toshiyuki and Piero Carninci (RIKEN) cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Sequencing Group at the Stanford Human Genome Center, Stanford University School of Medicine, Stanford, CA 94305 Web site: http://www-shgc.stanford.edu Contact: (Dickson, Mark) mcd@paxil.stanford.edu Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers, R. M. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAK Plate: 48 Row: l Column: 19 This clone was selected for full length sequencing because it passed the following selection criteria: matched mRNA gi: 50843826. FEATURES Location/Qualifiers source 1..5057 /db_xref="H-InvDB:HIT000052941" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:33725 IMAGE:5296472" /tissue_type="Testis" /clone_lib="NIH_MGC_97" /lab_host="DH10B" /note="Vector: pBluescriptR" gene 1..5057 /gene="AMBRA1" /gene_synonym="WDR94" /db_xref="GeneID:55626" /db_xref="HGNC:HGNC:25990" /db_xref="MIM:611359" CDS 361..3987 /gene="AMBRA1" /gene_synonym="WDR94" /codon_start=1 /product="autophagy/beclin-1 regulator 1" /protein_id="AAH45609.1" /db_xref="GeneID:55626" /db_xref="HGNC:HGNC:25990" /db_xref="MIM:611359" /translation="MKVVPEKNAVRILWGRERGARAMGAQRLLQELVEDKTRWMKWEG KRVELPDSPRSTFLLAFSPDRTLLASTHVNHNIYITEVKTGKCVHSLIGHRRTPWCVT FHPTISGLIASGCLDGEVRIWDLHGGSESWFTDSNNAIASLAFHPTAQLLLIATANEI HFWDWSRREPFAVVKTASEMERVRLVRFDPLGHYLLTAIVNPSNQQGDDEPEIPIDGT ELSHYRQRALLQSQPVRRTPLLHNFLHMLSSRSSGIQTEPFHPPEQASSTQQDQGLLN RPSAFSTVQSSTAGNTLRNLSLGPTRRSLGGPLSSHPSRYHREIAPGLTGSEWTRTVL SLNSRSEAESMPPPRTSASSVSLLSVLRQQEGGSQASVYTSATEGRGFPASGLATESD GGNGSSQNNSGSIRHELQCDLRRFFLEYDRLQELDQSLSGEAPQTQQAQEMLNNNIES ERPGPSHQPTPHSSENNSNLSRGHLNRCRACHNLLTFNNDTLRWERTTPNYSSGEASS SWQVPSSFESVPSSGSQLPPLERTEGQTPSSSRLELSSSASPQEERTVGVAFNQETGH WERIYTQSSRSGTVSQEALHQDMPEESSEEDSLRRRLLESSLISLSRYDGAGSREHPI YPDPARLSPAAYYAQRMIQYLSRRDSIRQRSMRYQQNRLRSSTSSSSSDNQGPSVEGT DLEFEDFEDNGDRSRHRAPRNARMSAPSLGRFVPRRFLLPEYLPYAGIFHERGQPGLA THSSVNRVLAGAVIGDGQSAVASNIANTTYRLQWWDFTKFDLPEISNASVNVLVQNCK IYNDASCDISADGQLLAAFIPSSQRGFPDEGILAVYSLAPHNLGEMLYTKRFGPNAIS VSLSPMGRYVMVGLASRRILLHPSTEHMVAQVFRLQQAHGGETSMRRVFNVLYPMPAD QRRHVSINSARWLPEPGLGLAYGTNKGDLVICRPEALNSGVEYYWDQLNETVFTVHSN SRSSERPGTSRATWRTDRDMGLMNAIGLQPRNPATSVTSQGTETLALQLQNAETQTER EVPEPGTAASGPGEGEGSEYGASGEDALSRIQRLMAEGGMTAVVQREQSTTMASMGGF GNNIIVSHRIHRSSQTGTEPGAAHTSSPQPSTSRGLLPEAGQLAERGLSPRTASWDQP GTPGREPTQPTLPSSSPVPIPVSLPSAEGPTVHCELTNNNHLLDGGSSRGDAAGPRGE PRNR" BASE COUNT 1202 a 1395 c 1388 g 1072 t ORIGIN 1 aggggattaa tgaagagcca ccagactatc tttatggaga atctagattg ggaagttaag 61 ctaagaatgt gcatttttga aaaagttttt atggtagaag agaatgtata tcagaggaaa 121 gaatgtagag aagaaagcaa cattgtccac tgggaattga taagttctgc gtagaattta 181 gagttataag gactatctca ttggctccta atgaatgcta aataacaaat ggaaattgct 241 atttccatga ggacaactta caaggacctg tatggcctca ttttagctgc ttcagtgtgt 301 tggagctgtt acttgctcct tcatttcctg ggcctggtgt gacagtggct actgagcgcc 361 atgaaggttg tcccagaaaa gaatgctgtc cggatactct gggggcgaga acggggtgct 421 cgggccatgg gagctcagcg gcttctgcag gagctggtag aggataaaac ccggtggatg 481 aaatgggagg gcaagagagt agaactgccg gatagtccac gctctacctt cttattggcc 541 ttcagcccag acaggactct cttagcctcc acccatgtga accataatat ctatattacg 601 gaggtgaaga ctggcaagtg tgttcattcc ctgattggac accgccgtac tccatggtgt 661 gtcacttttc atcccaccat ctcaggcctt attgcttctg gctgcctaga tggggaggtt 721 aggatttggg atttacacgg tggcagtgaa agctggttca cagatagcaa caatgccatt 781 gcctccctgg ctttccaccc tacggctcag ctcctgctga ttgccactgc caatgagatc 841 cacttctggg actggagtcg acgggaaccc tttgctgtgg tgaagacagc tagtgagatg 901 gaacgggtcc gtctggtgag atttgatcca cttggacact acttactcac agcaattgtt 961 aacccctcta atcaacaggg tgatgacgaa ccagagatcc ccatagatgg aacagaatta 1021 tcccactacc gtcagcgtgc cctcctgcaa tcacagccag ttcgccggac gcctctcctc 1081 cacaatttcc tgcacatgct gtcctcccgc tcttctggca tccagaccga gcccttccat 1141 cccccggagc aggcctcgtc aacgcagcag gaccagggcc tcctgaaccg gccgtctgcc 1201 ttcagtacag tccagagcag cactgccggc aacacgctcc gcaacctcag tctgggtcct 1261 acccgccgct ctttgggagg gcctctgtct agccaccctt ctaggtatca ccgagaaata 1321 gctcctgggt tgacaggatc tgagtggacc cggacagtac tcagtctgaa ctcccgctct 1381 gaggcggaat ccatgccccc gcccagaacc agtgcctctt cggtgagttt gctgtctgtg 1441 ctgagacagc aggaaggtgg ctctcaggca tctgtgtaca cttcagccac agaagggagg 1501 ggttttccgg catcagggtt ggcaactgag tcagatggag ggaatggctc cagccaaaac 1561 aactcgggca gcattcgcca tgagcttcag tgtgacctga gacgcttctt tctggagtat 1621 gaccggcttc aggagctgga tcagagcctg agtggggaag ctccccagac ccaacaggcc 1681 caggaaatgc tcaacaataa cattgaatct gagaggccag gcccttccca ccagcccacc 1741 ccacacagca gtgagaacaa ctccaacctg tcccgtggcc acctgaatcg ctgtcgtgct 1801 tgccacaatc tcctgacctt caacaacgat accctgcgct gggaaagaac cacacctaac 1861 tactcctctg gcgaggctag ttcctcttgg caggtcccca gctcctttga gagtgtgcca 1921 tcaagtggca gccagttgcc acctctcgag cggactgagg gccaaacgcc cagctccagc 1981 aggctggagt tgagcagctc tgctagtccg caggaggaga ggactgtggg ggtggccttt 2041 aaccaggaga caggccactg ggaaagaatt tacacccagt ccagcagatc tggaactgtg 2101 tcacaggagg ccttacatca ggatatgcct gaggagagct ctgaggagga ttcactcagg 2161 aggaggctgc tggaatcttc cctcatttca ttatcccgtt atgatggagc aggatccaga 2221 gagcacccaa tttacccaga cccagcgaga ttatctcctg ctgcatacta cgcccagagg 2281 atgatccagt atctctcacg gagagacagt attcgccagc gctccatgcg ctaccaacag 2341 aaccgtctcc gttcttccac ctcctcctct tcctcagaca accagggtcc atcagtagag 2401 ggaaccgact tggaatttga ggactttgag gacaatggtg acagatccag gcaccgagct 2461 ccacgcaatg cccggatgtc tgcaccttcg cttggacgct ttgtcccaag gcgtttcttg 2521 ctgcctgagt acttgcctta tgctgggatt tttcatgaac gtggacagcc tggcttggct 2581 actcactctt ctgttaacag ggtcctggca ggggcagtga tcggtgatgg acagtctgct 2641 gtggccagta acattgccaa tactacctac cggctccagt ggtgggactt cactaagttt 2701 gacctccctg aaatcagtaa tgcttccgtg aatgtgctgg tgcagaactg caagatctac 2761 aatgatgcca gctgtgacat ttctgcagat ggccagctcc tggcagcttt catccccagc 2821 agccagaggg gctttcctga tgaaggcatc ctggcagtgt actccctggc cccccataac 2881 ctgggcgaaa tgctctacac caagcgattt ggtcccaatg ccatttcggt gagcctgtcc 2941 ccaatgggca gatatgtaat ggtgggcttg gcctcacgaa ggatcctgct gcacccctcc 3001 acagagcaca tggtggccca ggtcttcagg ctgcaacagg cccatggtgg agagacctcc 3061 atgaggagag ttttcaacgt cctttatccc atgcctgccg accagcggag acatgtcagt 3121 atcaactctg cccgttggct gcctgagcca gggcttggct tggcctatgg tactaacaaa 3181 ggagacctgg tgatctgccg accagaggcc ttaaactctg gtgttgagta ctactgggac 3241 cagctgaacg agacggtctt cactgtccat tccaacagca ggagcagcga gcggcctgga 3301 accagcagag ccacatggag gacagacaga gacatggggc tgatgaatgc cattgggctt 3361 cagccccgga accctgccac ctcagtgaca tctcagggca ccgagactct ggcccttcag 3421 ctgcagaatg ccgaaacaca gactgagagg gaggtgccgg agccagggac agccgcctca 3481 ggtcctggtg aaggtgaggg ttcagagtat ggtgccagtg gagaagatgc gctcagcagg 3541 atccagaggc tgatggcgga gggcggcatg acagccgtgg tgcagcggga gcagagcacc 3601 accatggcct ccatgggcgg cttcggcaac aacatcatcg tcagccaccg cattcaccgc 3661 agctctcaga cgggcactga acctggtgcc gcccacacct cctcacccca gccctccacc 3721 tctcggggac tgctcccaga ggccgggcaa ctggcagagc gaggcctaag cccccggaca 3781 gcttcctggg accagcctgg tacccctggg cgggagccaa cccagccaac cctgccctct 3841 tcctcccctg tccccattcc tgtttccctt cccagcgctg agggaccaac cgtccactgc 3901 gagttgacca ataacaacca ccttctggat ggtggcagca gcagggggga cgctgcaggc 3961 cctaggggag aaccacggaa caggtagaga caaacgttgc actggtgcct cccctcgaac 4021 cgccaagcag aaaccggacc tcacagctga ctgggaactg gacatgtgga agagctgctg 4081 gctgcatcag ggaacaggag gaggaagagg gtcagggtgg agaggaagat cagtcagtgg 4141 gcacaagaca gtcaaatggg caaggcctgc ctcggggaac tagaaccttc caggatctgg 4201 agcccgggag agccacactg tgggcttaat gtgaatagag gaacaagtgg gtatctctgc 4261 caggcacccc actttctcct agtaacatgg gctcagggga ctcagccctg gacagagtgc 4321 ctccagagag tgaacagtct tccagatctg ggccaatcat cctggacaga ggcccgcgag 4381 gcagctttgc cctgtccacc tgttgggtgg gcagagccac caggaaccca gacaccacct 4441 ccaactctga gccttccaga gcttcagcct ctcttcgtcg tcttacccca ctgaaaccaa 4501 cagggatcgg gccaggctcc cagattcttg aggacaggga cttcggcatt tactaatggg 4561 ggactactgt ggggtaaggg ggcgcctgct tgcctgatac aggatggggt caagggacag 4621 tgggcaggtc ctcactcagg agtggggggt gtaggctggc cagcccccag ggcttgtcca 4681 ccagtcttct ccccgcaagg ccctcagagc agcgcctgtg ggtgtcagta ttacctgagc 4741 ctaggccaaa gctagcccaa ggctggggaa ggggaggaga ctccaggtca gaatgtgagg 4801 tctcagtctg tgatttaagg tgttgcatgt ggactcttaa ctgtacgtgt agtttctagt 4861 ggagaaatca aggctctgat cattttgttt ttagtatgaa aatgtgattt cctttctgtt 4921 tgtaactcat catagaaaca ttgtggtggg aggagagggg atagtctaca gctaatgagg 4981 gaaacaccaa agatcacatc attaaaatga tgacatgccc ctcaaaaaaa aaaaaaaaaa 5041 gaaaaaaaaa aaaaaaa //