LOCUS BC045598 3162 bp mRNA linear HUM 28-SEP-2006
DEFINITION Homo sapiens solute carrier family 25, member 42, mRNA (cDNA clone
MGC:26694 IMAGE:4819096), complete cds.
ACCESSION BC045598
VERSION BC045598.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 3162)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 3162)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (31-JAN-2003) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Miklos Palkovits, M.D., Ph.D.
cDNA Library Preparation: Michael J. Brownstein (NHGRI) & Shiraki
Toshiyuki and Piero Carninci (RIKEN)
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 32 Row: o Column: 19
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 60460886.
FEATURES Location/Qualifiers
source 1..3162
/db_xref="H-InvDB:HIT000052939"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:26694 IMAGE:4819096"
/tissue_type="Brain, hippocampus"
/clone_lib="NIH_MGC_95"
/lab_host="DH10B"
/note="Vector: pBluescriptR"
gene 1..3162
/gene="SLC25A42"
/gene_synonym="MGC26694"
/db_xref="GeneID:284439"
/db_xref="HGNC:HGNC:28380"
CDS 154..1110
/gene="SLC25A42"
/gene_synonym="MGC26694"
/codon_start=1
/product="solute carrier family 25, member 42"
/protein_id="AAH45598.1"
/db_xref="GeneID:284439"
/db_xref="HGNC:HGNC:28380"
/translation="MGNGVKEGPVRLHEDAEAVLSSSVSSKRDHRQVLSSLLPGALAG
ALAKTAVAPLDRTKIIFQVSSKRFSAKEAFRVLYYTYLNEGFLSLWRGNSATMVRVVP
YAAIQFSAHEEYKRILGSYYGFRGEALPPWPRLFAGALAGTTAASLTYPLDLVRARMA
VTPKEMYSNIFHVFIRISREEGLKTLYHGFMPTVLGVIPYAGLSFFTYETLKSLHREY
SGRRQPYPFERMIFGACAGLIGQSASYPLDVVRRRMQTAGVTGYPRASIARTLRTIVR
EEGAVRGLYKGLSMNWVKGPIAVGISFTTFDLMQIMLRHLQS"
BASE COUNT 604 a 958 c 920 g 680 t
ORIGIN
1 tgggggccgt ggcggctgga ggtagcggcg gcggcgacgc gtccaggccg gtgagggggc
61 gcggggggcg ccgggggggc ccaagcgtca gcggcccgcg cctgtcgggc tgaactgagg
121 accgagtctc ctgccattcc gagcaggcct ggtatgggta atggtgtgaa ggaaggcccg
181 gtgcgattgc atgaggatgc tgaggctgtc ctgtcctcgt ccgtctcatc aaagcgtgac
241 cacaggcaag tgctcagctc cctgctgcct ggggccctgg ctggtgccct tgccaaaaca
301 gcggtagctc ccctggaccg aaccaaaatc atcttccaag tgtcttcaaa aagattttct
361 gccaaggagg ccttccgggt cctctactac acctacctca acgagggatt tctcagcttg
421 tggcgcggga actcggccac catggtgcgc gtggtgccct acgccgccat ccagttcagc
481 gcacacgagg agtacaagcg catcctgggc agctactatg gcttccgtgg agaagccctg
541 cccccttggc ctcgcctctt cgccggcgca ctggctggaa cgacagccgc ttcactgacc
601 taccccctgg acctggtcag agcgcggatg gccgtaaccc cgaaggaaat gtacagcaac
661 atctttcatg tcttcatccg catctcgaga gaagaggggc tgaagactct ctaccatgga
721 tttatgccca ccgtgctggg ggtcattccc tacgctggcc tgagcttctt cacctatgag
781 acgctcaaga gcttgcacag agagtacagc ggccgccggc agccctaccc cttcgagcgc
841 atgatcttcg gcgcctgcgc tggcctcatc gggcagtcgg cctcgtaccc gctggatgtg
901 gtgcggcggc gcatgcagac ggccggcgtc acgggctacc cgcgcgcctc catcgcccgc
961 acgctgcgca ccatcgtgcg ggaggagggc gccgtgcgcg gcctctacaa aggcttgagc
1021 atgaactggg tcaagggtcc catcgccgtg ggcatcagct tcaccacctt cgacctcatg
1081 cagatcatgc tgcggcacct gcagagctag gggaccctga gctgctctca ggacggtgga
1141 ccggtgaccc ctttgtattc tgggcccatg gaacggtggg ggggtgcgct tgattctact
1201 tcaggaggca catggggcgc tttatggaac gagcaggtgg gcctgagggg cctgggctca
1261 gagtccacgt ccaaacgcaa agctggcagc cctggaagtg cagtgttggg gcgatggtgt
1321 ggggggtccc gcagctcccc tcttccttcc tctgcagacg ctggcgctgt ctgccggagg
1381 tgttgcccaa aaggccctag tggggcgtgg tcagctccac ctcctgatcc tgtgtgtcct
1441 ccgacatgct gctgattcta gtgacccctg tccccaccag gctcagagcc agactgcgcc
1501 tggaccttct tgttctgact ccacgtgcct gcccggcctc cagggtgcgg gggcgccttt
1561 cttgcaggcg gaccctgccc aggatggggc cagcctcgtg ctcagctttg gccacaaatg
1621 cagcccctgg cccaccccac cctgccggcc ctgccttctc cagtatttcc cacatggcca
1681 cgactcctca gtcactagag cctcctgctg ggaacagtgt cccccagagc ctcatgtcta
1741 tcctagaccc tgcaagcagc tgggtcccca agagtgcatc tccccctaga gttgcctgcc
1801 catgcccacc tgctttgtaa ccttcccagg agattcatgc ttgctctgca cagcagggct
1861 cgaggcccag gccatgacac ggaactgcct caggtttggg tcagacctgc atcctggggc
1921 atctgctgaa atgtgagcac acaaaccacc tcctttggcc cagaagcccc ccaggcctag
1981 catctcagtg ccccaaccct ctgcccagct gtggtatcca gcaggtcctt gggtccccac
2041 ttgagcaggc acttggctgg gatatggagc aatttaaagc ccacaggggt tgttcagttt
2101 ctatgaaatg gagcatgggg tgcctgctag cctcaatccc ccgaagtggg agcctcatga
2161 tagagtatag cttgggggtg ggaggtgagg aaaatctgag gtacccaggg gaacccccag
2221 ctaactggtc tctcagagga gtcccccagg gcccgccagc tatcacaggg actcagaaac
2281 acccatttcc taatgacatg gtgagtttct tgatttcttt tttttgtttg ttttgttttg
2341 gttttcaact tggctgaccc cgggtctatg atctattcac atcgaacccc tgactggtct
2401 gcctggtgcc agggtgagcg tgaccgtgag tgttgctttc gacagctggc tcagcacacg
2461 ctgtgtgaag ggatctgagc ttgttcatct ccagtcgtga cttcatttcc cttccttctg
2521 tcctcctcct gttcttgcct tggacctgca ggtgtgcaga ccgctctctc tgccttcctt
2581 gcatgtggcc accagccatc cctgatcttg tccccagagg cccaggcagc ctgtgatggc
2641 tgtgaggggc tgtcccactg tgtgggtatc ccttacccag cacttaaact tggcaggaga
2701 ggcagggcaa ccctcacagg gagatgggag ggcacccaac tcccacaagc atgcaacagc
2761 agtaggaatt gggggtctgc cccaggtggg tgagaccaaa tgagtggatt tggggccaca
2821 ggctaggcag gagagacaag gggtaggtgg gagggtcccc cagtccatgc tgaccccagt
2881 gtgtctcccc ggagatggct cctagctgag tgggacccgg caggagttgg ggacagtgct
2941 gtcccccacc cctgcacaca gccaggccct caggctctgc ggtcactcgc ctccctgctg
3001 gtcactggtc ttggtctgga gttatatttt gatgccatga agacactgtt tatatctaat
3061 gtttatatat tttaaagatt tgtgccaaga gagtatattt aataaaaact taaatgactt
3121 ctaaaaaaaa aaaaaaaaaa aaaaagaaaa aaaaaaaaaa aa
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