LOCUS BC045537 2097 bp mRNA linear HUM 17-JUL-2006
DEFINITION Homo sapiens carbohydrate (N-acetylglucosamine 6-O)
sulfotransferase 7, mRNA (cDNA clone MGC:57153 IMAGE:5261787),
complete cds.
ACCESSION BC045537
VERSION BC045537.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2097)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2097)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (31-JAN-2003) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Miklos Palkovits, M.D., Ph.D.
cDNA Library Preparation: Michael J. Brownstein (NHGRI) & Shiraki
Toshiyuki and Piero Carninci (RIKEN)
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Institute for Systems Biology
http://www.systemsbiology.org
contact: amadan@systemsbiology.org
Anup Madan, Jessica Fahey, Erin Helton, Mark Ketteman, Anuradha
Madan, Stephanie Rodrigues, Amy Sanchez and Michelle Whiting
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 106 Row: h Column: 11
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 23238227.
FEATURES Location/Qualifiers
source 1..2097
/db_xref="H-InvDB:HIT000052928"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:57153 IMAGE:5261787"
/tissue_type="Brain, hippocampus"
/clone_lib="NIH_MGC_95"
/lab_host="DH10B"
/note="Vector: pBluescriptR"
gene 1..2097
/gene="CHST7"
/gene_synonym="C6ST-2"
/db_xref="GeneID:56548"
/db_xref="HGNC:HGNC:13817"
/db_xref="MIM:300375"
CDS 149..1609
/gene="CHST7"
/gene_synonym="C6ST-2"
/codon_start=1
/product="carbohydrate (N-acetylglucosamine 6-O)
sulfotransferase 7"
/protein_id="AAH45537.1"
/db_xref="GeneID:56548"
/db_xref="HGNC:HGNC:13817"
/db_xref="MIM:300375"
/translation="MKGRRRRRREYCKFALLLVLYTLVLLLVPSVLDGGRDGDKGAEH
CPGLQRSLGVWSLEAAAAGEREQGAEARAAEEGGANQSPRFPSNLSGAVGEAVSREKQ
HIYVHATWRTGSSFLGELFNQHPDVFYLYEPMWHLWQALYPGDAESLQGALRDMLRSL
FRCDFSVLRLYAPPGDPAARAPDTANLTTAALFRWRTNKVICSPPLCPGAPRARAEVG
LVEDTACERSCPPVAIRALEAECRKYPVVVIKDVRLLDLGVLVPLLRDPGLNLKVVQL
FRDPRAVHNSRLKSRQGLLRESIQVLRTRQRGDRFHRVLLAHGVGARPGGQSRALPAA
PRADFFLTGALEVICEAWLRDLLFARGAPAWLRRRYLRLRYEDLVRQPRAQLRRLLRF
SGLRALAALDAFALNMTRGAAYGADRPFHLSARDAREAVHAWRERLSREQVRQVEAAC
APAMRLLAYPRSGEEGDAEQPREGETPLEMDADGAT"
BASE COUNT 369 a 665 c 699 g 364 t
ORIGIN
1 aagtttcccc ttgtggatgc gcggccccgc ggctctgctc ctcccggcgc agaggggccg
61 ggagaggcca caggagcgga cctggcacgg gatttctgag gaacgggaga agactggcgc
121 ccgacccgct ctggagggtc ggtgaacgat gaagggccgg cggcggcgac gccgagagta
181 ctgcaagttc gcgctgctgt tggtgctgta cacgctggtg ctgttgctcg tcccctccgt
241 attggacggc ggccgcgacg gggacaaggg cgccgagcac tgccccggcc tgcagcgcag
301 cctgggagtg tggagcctgg aggcggcggc ggccggcgaa cgcgagcagg gagcggaggc
361 gcgggccgcc gaggaagggg gcgcgaacca gtctcctcgg ttcccaagca acctcagcgg
421 cgctgtcggg gaggcagtgt ctcgcgagaa gcagcacatc tacgtgcatg ccacctggcg
481 caccggctcg tccttcctgg gcgaactctt taaccagcac ccggacgttt tctacttgta
541 tgagcccatg tggcatctat ggcaggcgct gtatccgggc gacgccgaga gcttgcaggg
601 cgcgctgcgc gacatgctgc gttcgctctt ccgctgcgac ttctccgtgc tgcggctgta
661 cgcgccgccg ggggaccccg ctgcgcgcgc cccggacacg gccaatctta ccacggccgc
721 cctcttccgc tggcggacta acaaggtcat ctgctcgccg ccactgtgtc ctggcgcacc
781 ccgtgcccgg gccgaggtgg gcctcgtcga ggacaccgcc tgcgagcgca gctgcccacc
841 cgtggcgata cgcgccctgg aggccgagtg ccgaaagtac ccggtggtgg tcatcaagga
901 cgtgcgcctg ctcgatctgg gcgtgctggt gcccctgttg cgtgatccag gcctcaacct
961 gaaggtggtg cagcttttcc gcgacccgag ggcggtgcac aactcgcgcc tcaagtctag
1021 gcagggactg ctgcgcgaga gcatccaggt gctgcgcacc cgccagaggg gcgaccgctt
1081 ccaccgtgtg ctgctggcgc acggcgtggg tgctcgcccc gggggccagt ctcgcgcgct
1141 gcccgccgcg ccgcgcgccg atttcttcct gaccggtgcg ctcgaggtga tctgcgaagc
1201 ctggctgcgc gatctgcttt tcgcgcgcgg cgcgcccgcc tggctgcggc gccgctacct
1261 gaggctgcgc tatgaggacc tggtgcggca gccacgcgcc cagctgcgcc gcctgctgcg
1321 cttctccggg ctacgcgcgc tcgcagcgct cgatgccttc gcgctcaaca tgactcgcgg
1381 cgcggcctac ggcgccgacc ggcccttcca cctgtcagcg cgcgacgccc gggaggcggt
1441 gcacgcctgg cgcgagcgcc tgagccgaga gcaggtgcgc caggtggagg ccgcctgcgc
1501 tccagccatg cgtctgctcg cctaccctcg cagcggagag gagggcgacg cggagcagcc
1561 cagggaaggg gagacgccgc tggagatgga tgccgacggc gccacgtagc ctcccatccc
1621 tgtccccggc acggatccgg gtcagtcacc acgaacaggg gcactcggca tgctgcccca
1681 gcactggaga agcagcgctg tgggggcaat ctgtcacact ctcagagtct gggacttgac
1741 ttgctaccaa caactgctgt gcaattctgc tgagcaggaa tatcatgagc tgttcaataa
1801 tgacggacgc attggttgag atgaagtttc cagtaaggaa gtgacagtgc aatgtggata
1861 tttatggctg taaaatagga agagctttag ttcccaggct gaacctgcca ctgctggagc
1921 catttcaaca aggcatcctc acaacaaaga agagatgtga tttggtacca tttcacacca
1981 gcaggtgtct ggacgaaaac atcaatgtga ataagggcca agtgcagtcc tgtcttgatt
2041 aaattactta ataatattat taaataataa taggtctggg caaaaaaaaa aaaaaaa
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