LOCUS BC044948 1926 bp mRNA linear HUM 01-SEP-2006
DEFINITION Homo sapiens synaptotagmin VI, mRNA (cDNA clone MGC:50299
IMAGE:5245305), complete cds.
ACCESSION BC044948
VERSION BC044948.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1926)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1926)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (23-JAN-2003) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Life Technologies, Inc.
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 87 Row: o Column: 4
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 45504375.
FEATURES Location/Qualifiers
source 1..1926
/db_xref="H-InvDB:HIT000052913"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:50299 IMAGE:5245305"
/tissue_type="Brain, fetal, whole pooled"
/clone_lib="NIH_MGC_121"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..1926
/gene="SYT6"
/db_xref="GeneID:148281"
/db_xref="HGNC:HGNC:18638"
/db_xref="MIM:607718"
CDS 251..1528
/gene="SYT6"
/codon_start=1
/product="synaptotagmin VI"
/protein_id="AAH44948.1"
/db_xref="GeneID:148281"
/db_xref="HGNC:HGNC:18638"
/db_xref="MIM:607718"
/translation="MPWRNKEASSPSSANPPLEALQSPSFRGNMADKLKDPSTLGFLE
AAVKISHTSPDIPAEVQMSVKEHIMRHTRLQRQTTEPASSTRHTSFKRHLPRQMHVSS
VDYGNELPPAAEQPTSIGRIKPELYKQKSVDGEDAKSEATKSCGKINFSLRYDYETET
LIVRILKAFDLPAKDFCGSSDPYVKIYLLPDRKCKLQTRVHRKTLNPTFDENFHFPVP
YEELADRKLHLSVFDFDRFSRHDMIGEVILDNLFEASDLSRETSIWKDIQYATSESVD
LGEIMFSLCYLPTAGRLTLTVIKCRNLKAMDITGYSDPYVKVSLLCDGRRLKKKKTTI
KKNTLNPVYNEAIIFDIPPENMDQVSLLISVMDYDRVGHNEIIGVCRVGITAEGLGRD
HWNEMLAYPRKPIAHWHSLVEVKKSFKEGNPRL"
BASE COUNT 447 a 553 c 530 g 396 t
ORIGIN
1 tggggccgtc gtgccccgcc ccagtgcggc cggggcgcgg gttcgagctg ctgctcggca
61 agcctgggtg tctagggcat gagcggagtg tggggggccg gcgggcctcg gtgccaggag
121 gcgctcgcgg tcctcgcctc gctgtgccgg gcccggccgc cccctctcgg gctggacgtg
181 gagacttgtc ggagcttcga gctgcagccc ccagagcgga gtcccagcgc ggcaggcgca
241 gctgtgctgg atgccctgga ggaacaagga ggcctccagt ccctcttctg ctaatccccc
301 cttggaagcc ctccagagcc ccagcttcag aggcaacatg gcggacaagc tgaaggaccc
361 cagcaccctg ggcttcctgg aggcggccgt gaagatcagc cacacgtccc cagatatccc
421 agctgaggtg cagatgtcgg tcaaggagca catcatgcgt cacacccggc tgcagcggca
481 aactacagag ccagcgtcat ccaccaggca cacgtccttc aagcgccacc tgccaaggca
541 gatgcatgtc tccagtgtag actatggcaa tgagcttcca ccagcagcag agcagcccac
601 cagcattggc cgcatcaagc ctgagctcta caagcagaag tcggtggatg gggaggatgc
661 caagtctgag gccaccaaga gctgcgggaa gatcaacttc agcctacgct acgattacga
721 gaccgagacc ctgattgtgc gtatcctgaa ggcttttgac ctccctgcca aggacttttg
781 tggaagctct gacccttatg tcaagatcta cctcctgcct gaccgcaaat gcaagctgca
841 gacccgggtg caccgcaaga ccctgaaccc cacctttgat gagaacttcc acttccctgt
901 gccctatgag gagctggctg accgcaagct gcatctcagt gtcttcgact ttgaccgctt
961 ctcccgccat gacatgattg gcgaggtcat cctggacaac ctctttgagg cctctgacct
1021 gtctcgggaa acctccatct ggaaggatat ccaatatgcc acaagtgaaa gcgtggactt
1081 gggagagatc atgttctccc tttgctacct gcccactgca ggcaggctca ccctcacagt
1141 gattaagtgt cggaacctca aggcgatgga catcacaggc tattcagatc cctatgtgaa
1201 agtgtccttg ctctgtgatg ggcggaggct gaagaagaag aaaacaacca taaagaaaaa
1261 cactctcaat cctgtctaca atgaggccat catctttgac attcccccgg aaaacatgga
1321 tcaagtcagc ctgctcatct cagtcatgga ctatgatcga gtgggccaca atgagatcat
1381 aggagtctgt cgtgtgggga tcactgctga aggcctgggc agggaccact ggaacgagat
1441 gctggcatac ccccggaagc ccatcgcaca ctggcactcc ttggtggagg taaagaaatc
1501 cttcaaagag ggaaaccctc ggttgtgatt tcattcacgt ggatgctgca agcagagaga
1561 ctgccacctg gagttaggat ggcagggccg agctgctagc ttcgacagtg agagctcgtg
1621 cccatctccg aaaccacctc caacaccatg agatgtgcag ccaaataaca caaatgggac
1681 tcagcaatgt tctctttgca cttgttcaac cgtctaaaca gtgttgtgca gtcgcagtgg
1741 cggcagcagc ggcagccgtc cgtcactcca gagtcttacc tgctcctgtg taggtcaagg
1801 ctgagacact tgtcatgtgg tcagatctgt cttagtcttt tgtgtctccc aaggtgatgt
1861 ttttgtggtt tttcactttt tatgggtctg ctggtaaaaa aaaaaaaaaa aaaaaaaaaa
1921 aaaaaa
//