LOCUS BC044889 2297 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens suppressor of variegation 4-20 homolog 2 (Drosophila),
mRNA (cDNA clone MGC:17538 IMAGE:3461265), complete cds.
ACCESSION BC044889
VERSION BC044889.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2297)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2297)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (23-JAN-2003) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Baylor College of Medicine Human Genome
Sequencing Center
Center code: BCM-HGSC
Web site: http://www.hgsc.bcm.tmc.edu/cdna/
Contact: amg@bcm.tmc.edu
Gunaratne, P.H., Garcia, A.M., Lu, X., Hulyk, S.W., Loulseged, H.,
Kowis, C.R., Sneed, A.J., Martin, R.G., Muzny, D.M., Nanavati,
A.N., Gibbs, R.A.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 19 Row: n Column: 15
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 31543168.
FEATURES Location/Qualifiers
source 1..2297
/db_xref="H-InvDB:HIT000052903"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:17538 IMAGE:3461265"
/tissue_type="Cervix, carcinoma"
/clone_lib="NIH_MGC_12"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..2297
/gene="SUV420H2"
/gene_synonym="MGC2705"
/db_xref="GeneID:84787"
/db_xref="HGNC:HGNC:28405"
CDS 206..1594
/gene="SUV420H2"
/gene_synonym="MGC2705"
/codon_start=1
/product="suppressor of variegation 4-20 homolog 2
(Drosophila)"
/protein_id="AAH44889.1"
/db_xref="GeneID:84787"
/db_xref="HGNC:HGNC:28405"
/translation="MGPDRVTARELCENDDLATSLVLDPYLGFRTHKMNVSPVPPLRR
QQHLRSALETFLRQRDLEAAYRALTLGGWTARYFQSRGPRQEAALKTHVYRYLRAFLP
ESGFTILPCTRYSMETNGAKIVSTRAWKKNEKLELLVGCIAELREADEGLLRAGENDF
SIMYSTRKRSAQLWLGPAAFINHDCKPNCKFVPADGNAACVKVLRDIEPGDEVTCFYG
EGFFGEKNEHCECHTCERKGEGAFRTRPREPALPPRPLDKYQLRETKRRLQQGLDSGS
RQGLLGPRACVHPSPLRRDPFCAACQPLRLPACSARPDTSPLWLQWLPQPQPRVRPRK
RRRPRPRRAPVLSTHHAARVSLHRWGGCGPHCRLRGEALVALGQPPHARWAPQQDWHW
ARRYGLPYVVRVDLRRLAPAPPATPAPAGTPGPILIPKQALAFAPFSPPKRLRLVVSH
GSIDLDVGGEEL"
BASE COUNT 422 a 782 c 715 g 378 t
ORIGIN
1 ggaggctgtg ggaggtgttg gcggcggcgg cgcgggcgcc tgaggaggag gaggagaagc
61 ggatgagatc gtggggctca ccagcgtccc ccatggcttc tgagtagcgt gggagtggag
121 tcagcaccaa gccaggctcc ccgcgcctgc cttgccctca cctgctcctg ctctctgcca
181 gaggcagcat ggtccgcagg gcaccatggg gcccgacaga gtgacagcac gagaactgtg
241 cgagaacgac gacctggcca ccagcctcgt cctggacccc tacctcggtt tccgcaccca
301 taagatgaac gtcagccctg tgccccccct gcggcgacag cagcacctgc gctcagcgct
361 ggaaactttc ctgaggcagc gggacctgga ggctgcgtac cgggccctga cgctgggagg
421 ctggacggcc cgctacttcc agagccgggg cccgcggcag gaggctgccc tcaagaccca
481 cgtctatcgc tacctccgtg ccttcctgcc ggaaagtggc tttaccatcc tgccctgcac
541 gcgctactcc atggagacca acggggccaa gatcgtgtcc actcgtgctt ggaaaaagaa
601 tgagaagctg gagctgctgg tgggctgcat tgcagagctg cgggaggcag atgaggggct
661 gctgagggcc ggtgagaatg acttcagcat catgtactca acccgcaagc ggagtgctca
721 gctgtggctg ggcccagccg ccttcatcaa ccatgactgc aaacccaact gcaagtttgt
781 gcctgcagat gggaacgcag cctgcgtgaa ggtgctccgg gacattgagc ctggggacga
841 ggtgacatgc ttctacggcg agggcttctt cggcgagaag aatgagcact gtgaatgcca
901 cacctgtgag aggaaaggtg aaggagcttt ccgaaccagg cctagggagc ccgcgttgcc
961 accacggccc ctggacaagt accagctgcg tgagaccaag cggcggctgc agcaaggcct
1021 ggacagtggc agccgacagg gcctgctggg ccctcgggcc tgcgtgcacc catccccgct
1081 gcgccgggac ccattctgcg ccgcctgcca gcccctgcgc ctgccagcct gcagcgcccg
1141 cccagacacc tcacccctct ggctccagtg gctgcctcag ccccagcccc gagtgcggcc
1201 ccggaagcgc cgacgccccc ggccccggag ggccccagtg ctctccaccc accacgctgc
1261 ccgcgtctcc ctgcaccgat ggggaggctg tggcccccac tgccgcctgc gaggagaggc
1321 cctggtggcc ctgggccagc ccccccacgc ccgctgggcc cctcagcagg actggcactg
1381 ggcccggcgc tatgggctgc cttacgtggt gcgtgtggac cttcgtcgcc tggccccagc
1441 cccaccagct accccagccc ctgctgggac cccaggcccc atcctgatcc cgaagcaggc
1501 cctcgccttc gcccccttct ccccacccaa gcgcctacgg ctggtggtca gccacggctc
1561 catcgacctg gatgtcggcg gtgaagagct gtgacaggcc ggacggggag gcccagcagg
1621 gagagagggt ctctctccta gctgctaccc aggacctcca gaaggagccc ttggacctct
1681 gggagggagc tgacccttga ctccagcata gctctgaccc tggaatgggg ttggtttgga
1741 cacccccagg gatctgagcc ctgacccttt gtgactgctg acccctgagc cacccccact
1801 cccacaggga gccccggcca tttgctgccc tccccacccc tgccccagcc tcaggactgc
1861 aggagccatc cgcccccctc agccccttcc tccccaggga gcaaagccat aaggggcagg
1921 ggccacccca cggcatctcc ccagaagtac aggcctcagg aggaggtgga actgatgtag
1981 ggggtggcac tccccagaga ctgccctcac gaggggactg ggttcgctct cagctctgca
2041 gctgtctgcg gtggggggaa ggttgggggg tgtctggagg catgttcccc tcaccacccc
2101 ccgtgggtct cagggaggcc gggtgtgacc tcatctttct catggtgcta tcctggtgct
2161 attggggtgg ggagttccct cccctccccc acaccagaaa ggggtatgtt gggggattgg
2221 aagcacttga actttttatt ttattaaaac cttgttataa gcagcaaaaa aaaaaaaaaa
2281 aaaaaaaaaa aaaaaaa
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