LOCUS BC044857 3697 bp mRNA linear HUM 24-JAN-2005
DEFINITION Homo sapiens general transcription factor IIIC, polypeptide 1,
alpha 220kDa, mRNA (cDNA clone IMAGE:5113502), partial cds.
ACCESSION BC044857
VERSION BC044857.2
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 3697)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 3697)
AUTHORS Director MGC Project.
TITLE Direct Submission
JOURNAL Submitted (23-JAN-2003) National Institutes of Health, Mammalian
Gene Collection (MGC), Cancer Genomics Office, National Cancer
Institute, 31 Center Drive, Room 11A03, Bethesda, MD 20892-2590,
USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Jul 1, 2004 this sequence version replaced BC044857.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Baylor College of Medicine Human Genome
Sequencing Center
Center code: BCM-HGSC
Web site: http://www.hgsc.bcm.tmc.edu/cdna/
Contact: amg@bcm.tmc.edu
Gunaratne, P.H., Garcia, A.M., Lu, X., Hulyk, S.W., Loulseged, H.,
Kowis, C.R., Sneed, A.J., Martin, R.G., Muzny, D.M., Nanavati,
A.N., Gibbs, R.A.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 52 Row: g Column: 18
This clone was selected for full length sequencing because it
passed the following selection criteria: Hexamer frequency ORF
analysis.
FEATURES Location/Qualifiers
source 1..3697
/db_xref="H-InvDB:HIT000097956"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:5113502"
/tissue_type="Cervix, carcinoma"
/clone_lib="NIH_MGC_12"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene <1..3697
/gene="GTF3C1"
/gene_synonym="TFIIIC"
/gene_synonym="TFIIIC220"
/gene_synonym="TFIIICalpha"
/db_xref="GeneID:2975"
/db_xref="MIM:603246"
CDS <1..2937
/gene="GTF3C1"
/gene_synonym="TFIIIC"
/gene_synonym="TFIIIC220"
/gene_synonym="TFIIICalpha"
/codon_start=1
/product="GTF3C1 protein"
/protein_id="AAH44857.1"
/db_xref="GeneID:2975"
/db_xref="MIM:603246"
/translation="GLIPGDGLGAAGLDSSFYGHLKRNWIWTSYIINQAKKENTAAEN
GLTVRLQTFLSKRPMPLSARGNSRLNIWGEARVGSELCAGWEEQFEVDREPSLDRNRR
VRGGKSQKRKRLKKDPGKKIKRKKKGEFPGEKSKRLRYHDEADQSALQRMTRLRVTWS
MQEDGLLVLCRIASNVLNTKVKGPFVTWQVVRDILHATFEESLDKTSHSVGRRARYIV
KNPQAYLNYKVCLAEVYQDKALVGDFMNRRGDYDDPKVCANEFKEFVEKLKEKFSSAL
RNSNLEIPDTLQELFARYRVLAIGDEKDQTRKEDELNSVDDIHFLVLQNLIQSTLALS
DSQMKSYQSFQTFRLYREYKDHVLVKAFMECQKRSLVNRRRVNHTLGPKKNRALPFVP
MSYQLSQTYYRIFTWRFPSTICTESFQFLDRMRAAGKLDQPDRFSFKDQDNNEPTNDM
VAFSLDGPGGNCVAVLTLFSLGLISVDVRIPEQIIVVDSSMVENEVIKSLGKDGSLED
DEDEEDDLDEGVGGKRRSMEVKPAQASHTNYLLMRGYYSPGIVSTRNLNPNDSIVVNS
CQMKFQLRCTPVPARLRPAAAPLEELTMGTSCLPDTFTKLINPQENTCSLEEFVLQLE
LSGYSPEDLTAALEILEAIIATGCFGIDKEELRRRFSALEKAGGGRTRTFADCIQALL
EQHQVLEVGGNTARLVAMGSAWPWLLHSVRLKDREDADIQREDPQARPLEGSSSEDSP
PEGQAPPSHSPRGTKRRASWASENGETDAEGTQMTPAKRPALQDSNLAPSLGPGAEDG
AEAQAPSPPPALEDTAAAGAAQEDQEGVGFTESFGAANISQAARERDCESVCFIGRPW
RVVDGHLNLPVCKGMMEAMLYHIMTRPGIPESSLLRHYQGVLQPVAVLELLQGLESLG
CIRKRWLRKPRPVSLFSTPVVEEVEVPSSLDESPMAFYEPTLDCTLRLGRVFPHEVNW
NKWIHL"
BASE COUNT 844 a 1056 c 1062 g 735 t
ORIGIN
1 ggcttgatcc ctggagatgg gctgggtgcc gcagggctcg attccagctt ctacggacac
61 ctcaagcgca actggatctg gaccagctac atcatcaacc aggccaaaaa ggagaacact
121 gccgcagaga atggactcac agtgaggctc cagacatttc tgtccaagcg cccaatgccc
181 ctcagtgcca gaggcaacag caggttgaat atttgggggg aagcaagagt aggctccgag
241 ctctgtgctg gctgggaaga gcagtttgag gtggaccgag agccctcgct ggaccgaaac
301 cggagagtga ggggtgggaa aagccagaag cggaagcggc tgaagaagga ccctgggaag
361 aagatcaaga gaaagaagaa aggagagttc ccaggagaaa aaagcaaaag gctgcgctac
421 catgatgaag ccgaccagag tgccctgcag cggatgacgc ggcttcgtgt cacctggtct
481 atgcaggagg atgggctgct tgtgctgtgc cgcattgcca gcaatgtcct caacaccaag
541 gtgaagggcc catttgtcac ctggcaggtg gtacgggaca ttttgcatgc cacgtttgaa
601 gagtctttgg ataaaacatc tcattccgtt ggacgaagag ctcgctacat agtcaaaaac
661 ccacaggcct atctcaacta taaagtgtgc ctggccgagg tgtaccagga taaagcactt
721 gttggagatt tcatgaatcg aagaggtgac tatgatgacc caaaggtttg tgccaacgag
781 tttaaagaat ttgtggagaa gcttaaagaa aagttcagtt cagccctaag gaattctaac
841 cttgaaatcc cagacacact ccaggagctg ttcgccaggt accgagtttt ggcaattggg
901 gatgaaaaag atcaaaccag gaaagaggat gaacttaaca gcgtggatga catccacttt
961 ctggtgcttc agaacctgat ccagagcacg ctggccctct cagacagtca gatgaagtcc
1021 taccagtcat tccagacttt ccgcctctat cgggagtaca aggaccacgt tcttgtgaag
1081 gccttcatgg agtgccagaa gaggagcttg gtcaaccggc gccgggtcaa ccacacgctg
1141 ggccccaaga agaaccgggc cctccccttc gtgccaatgt cctaccagct atcccagacc
1201 tactacagga tttttacgtg gcgatttcca agcaccatct gcacggagtc attccagttt
1261 ttggacagaa tgcgggctgc cggcaagttg gaccagcctg atcgtttctc tttcaaagac
1321 caggataata acgagcccac aaacgacatg gtggcctttt cactggacgg ccctggagga
1381 aattgtgtgg ccgtcctgac cctcttctct ctgggcctca tttctgtgga tgtcaggatc
1441 ccggagcaga tcatcgtggt agacagctca atggtggaga atgaggtcat caaaagcttg
1501 gggaaggacg gcagcctgga ggatgacgag gatgaagagg atgacttgga cgaaggtgta
1561 gggggcaagc gccggagcat ggaggtgaaa cctgcgcaag cctcccacac caactacctg
1621 ctgatgaggg gctactactc ccccggcatc gtcagcaccc gcaacctcaa ccccaacgac
1681 agcattgtgg tcaactcctg ccagatgaag ttccagctcc gctgcacccc tgtgcccgcc
1741 cggctcaggc ccgctgccgc tcctctggaa gagctaacaa tgggaacctc ctgcctccct
1801 gatacgttca ccaagctgat aaacccccag gaaaacacct gcagcttgga ggagtttgtc
1861 ctccagctgg agctgtctgg gtatagtccc gaagacctga ctgctgcctt ggagatcttg
1921 gaagccatta tagccacggg ttgttttggg attgacaagg aggagctgcg cagacggttc
1981 tcggccttgg agaaggcagg tggtgggcgc accaggacat tcgcagattg catccaggcc
2041 ctcctggagc agcatcaggt gctggaggtc ggtggcaaca ctgcgcgcct ggtagccatg
2101 ggctctgcct ggccttggct cctgcactcc gtgcggctga aagacagaga agacgccgac
2161 atccagagag aagaccccca ggccagaccc ctggaggggt cttccagtga ggacagcccc
2221 cccgaggggc aggcacctcc ttctcacagc ccccggggca ccaagaggcg cgccagctgg
2281 gccagtgaga atggggagac cgacgccgag ggcacccaga tgacccctgc caagaggcca
2341 gcgctccagg actcaaattt ggcccccagc cttgggcccg gagctgaaga tggggcagaa
2401 gcccaggccc catctccacc cccagctctt gaagacaccg ctgcagcggg agcagcacag
2461 gaagaccaag agggtgtcgg gttcacagag agtttcggag ctgccaacat ctcccaggca
2521 gcacgggaaa gggactgtga gagtgtctgc ttcatcggcc ggccgtggcg tgtcgtggat
2581 ggccacctga accttcctgt atgcaagggt atgatggagg ccatgctgta ccacatcatg
2641 accaggcctg gcatccccga gagctccctg ctgcgccact accagggggt cctgcagccc
2701 gtcgccgtgc tggagttgct ccagggcctg gagtccctcg gctgcatccg gaagcgctgg
2761 ctgagaaagc caaggcctgt ctcgctcttc tctacacccg tggtggaaga ggtggaagtg
2821 ccctccagcc tggacgagag ccccatggct ttctatgagc ccaccttgga ctgtaccctc
2881 cggctgggcc gtgtgttccc ccacgaggtc aactggaaca agtggatcca cctctaggac
2941 ccctgtgggc gtcccctccc tcccagccac cgcctgccac accactcctg cctggtgctc
3001 ggcagacccc actgtgccct ggccttgggt ctgccgagcc tcctgcagca ggggacgggt
3061 gctttggcca gagtcacaga ctgacacgtt tcccactgta ctggaactct ggaaagaggg
3121 gctccccgac ctgcccatcc cccaggctct tctgggcctt ccccttggga actggcctca
3181 tcacactggg agttggtgct tcttgtctct gggtctccag agtttgcccc gcctgtgcac
3241 acctcacatt ccagactcta gccatctcgg caggatctcc tggctccttg agtgcccagg
3301 tgccaccaag aggaagggcc ttgtgggata caccttgcag aatagggatc ggtgtgcccc
3361 gctgcgaggg gccccccatg ggggctgtgg cccctccgca ggcaggacat cccaacccct
3421 ggctgggact gaaccaccca gagcggagcg gctccctttt cagccttgtg agtcacctgg
3481 caggccccag ctgggctggc tgtccgtgtc cctcagcctg gctggtgatt ccttgcaggc
3541 cagaaatgaa gagtccctgt aggttttggt tttgtttgtt ttattttgtt ctttcacctt
3601 ttttcctcat taaaaaaaaa aagtcccttt ggagtgtact tatttatttt ttgattaaag
3661 ggaagtaaaa tgcaaaaaaa aaaaaaaaaa aaaaaaa
//