LOCUS BC044647 1413 bp mRNA linear HUM 15-JUL-2006 DEFINITION Homo sapiens heparan sulfate (glucosamine) 3-O-sulfotransferase 3A1, mRNA (cDNA clone MGC:52218 IMAGE:5478042), complete cds. ACCESSION BC044647 VERSION BC044647.1 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 1413) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 1413) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (17-JAN-2003) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: ATCC cDNA Library Preparation: Rubin Laboratory cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: National Institutes of Health Intramural Sequencing Center (NISC), Gaithersburg, Maryland; Web site: http://www.nisc.nih.gov/ Contact: nisc_mgc@nhgri.nih.gov Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B., Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S., Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P., Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R., Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C., McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W., Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L., Young,A., Zhang,L.-H. and Green,E.D. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAL Plate: 44 Row: l Column: 19 This clone was selected for full length sequencing because it passed the following selection criteria: matched mRNA gi: 5174464. FEATURES Location/Qualifiers source 1..1413 /db_xref="H-InvDB:HIT000052885" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:52218 IMAGE:5478042" /tissue_type="Brain, astrocytoma, grade IV" /clone_lib="NIH_MGC_98" /lab_host="DH10B" /note="Vector: pOTB7" gene 1..1413 /gene="HS3ST3A1" /gene_synonym="30ST3A1" /gene_synonym="3OST3A1" /db_xref="GeneID:9955" /db_xref="HGNC:HGNC:5196" /db_xref="MIM:604057" CDS 164..1384 /gene="HS3ST3A1" /gene_synonym="30ST3A1" /gene_synonym="3OST3A1" /codon_start=1 /product="heparan sulfate (glucosamine) 3-O-sulfotransferase 3A1" /protein_id="AAH44647.1" /db_xref="GeneID:9955" /db_xref="HGNC:HGNC:5196" /db_xref="MIM:604057" /translation="MAPPGPASALSTSAEPLSRSIFRKFLLMLCSLLTSLYVFYCLAE RCQTLSGPVVGLSGGGEEAGAPGGGVLAGGPRELAVWPAAAQRKRLLQLPQWRRRRPP APRDDGEEAAWEEESPGLSGGPGGSGAGSTVAEAPPGTLALLLDEGSKQLPQAIIIGV KKGGTRALLEFLRVHPDVRAVGAEPHFFDRSYDKGLAWYRDLMPRTLDGQITMEKTPS YFVTREAPARISAMSKDTKLIVVVRDPVTRAISDYTQTLSKRPDIPTFESLTFKNRTA GLIDTSWSAIQIGIYAKHLEHWLRHFPIRQMLFVSGERLISDPAGELGRVQDFLGLKR IITDKHFYFNKTKGFPCLKKAEGSSRPHCLGKTKGRTHPEIDREVVRRLREFYRPFNL KFYQMTGHDFGWDG" BASE COUNT 247 a 489 c 471 g 206 t ORIGIN 1 ggagccccgg ccgctgcctc ccgggacagt tcgcacggcc acaggggcgc acggcgatgt 61 ggcctccgtc cagcgcgctg gcccgccggg gggatgctct ggcacctgtc ggggtccagg 121 cctagcatgg ccggcacgtt gcccgacgtc gcctccggct aggatggccc ctccgggccc 181 ggccagtgcc ctctccacct cggccgagcc gctgtcccgc agcatcttcc ggaagttctt 241 gctgatgctc tgctccctgc tcacgtccct ttacgtcttc tactgcctgg ccgagcgctg 301 ccagaccctg tccggccccg tcgtggggct gtccggcggc ggcgaggagg cgggggcccc 361 tggtggcggc gtcctggccg gaggcccgag ggagctggcg gtgtggccgg cggcggcaca 421 gagaaagcgc ctcctgcaac tgccgcagtg gcggaggcgc cggccgcccg cgccccgcga 481 cgacggcgag gaggcggcct gggaagaaga gtcccctggc ctgtcagggg gtccgggcgg 541 ctccggggcc ggaagcaccg tggccgaggc cccgccgggg accctggcgc tgctcctgga 601 cgaaggcagc aagcagctgc cgcaggccat catcatcgga gtgaagaagg gcggcacgcg 661 ggcgctgctg gagttcctgc gcgtgcaccc cgacgtgcgc gccgtgggcg ccgagcccca 721 cttcttcgac cgcagctacg acaagggcct cgcctggtac cgggacctga tgcccagaac 781 cctggacggg cagatcacca tggagaagac gcccagttac ttcgtcacgc gggaggcccc 841 cgcgcgcatc tcggccatgt ccaaggacac caagctcatc gtggtggtgc gggacccggt 901 gaccagggcc atctcggact acacgcagac gctgtccaag cggcccgaca tccccacctt 961 cgagagcttg acgttcaaaa acaggacagc gggcctcatc gacacgtcgt ggagcgccat 1021 ccagatcggc atctacgcca agcacctgga gcactggctg cgccacttcc ccatccgcca 1081 gatgctcttc gtgagcggcg agcggctcat cagcgacccg gccggggagc tgggccgcgt 1141 gcaagacttc ctgggcctca agaggatcat cacggacaag cacttctact tcaacaagac 1201 caagggcttc ccctgcctga agaaggcgga gggcagcagc cggccccatt gcctgggcaa 1261 gaccaagggc aggacccatc ctgagatcga ccgcgaggtg gtgcgcaggc tgcgcgagtt 1321 ctaccggcct ttcaacctca agttctacca gatgaccggg cacgactttg gctgggatgg 1381 ataaccatat aatttaaaaa aaaaaaaaaa aaa //