LOCUS BC044644 2693 bp mRNA linear HUM 18-MAR-2009
DEFINITION Homo sapiens ArfGAP with GTPase domain, ankyrin repeat and PH
domain 3, mRNA (cDNA clone MGC:52327 IMAGE:5453989), complete cds.
ACCESSION BC044644
VERSION BC044644.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2693)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2693)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (17-JAN-2003) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 44 Row: j Column: 9.
FEATURES Location/Qualifiers
source 1..2693
/db_xref="H-InvDB:HIT000052884"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:52327 IMAGE:5453989"
/tissue_type="Brain, astrocytoma, grade IV"
/clone_lib="NIH_MGC_98"
/lab_host="DH10B"
/note="Vector: pOTB7"
gene 1..2693
/gene="AGAP3"
/gene_synonym="CRAG"
/gene_synonym="MRIP-1"
/db_xref="GeneID:116988"
/db_xref="HGNC:HGNC:16923"
CDS 94..1824
/gene="AGAP3"
/gene_synonym="CRAG"
/gene_synonym="MRIP-1"
/codon_start=1
/product="AGAP3 protein"
/protein_id="AAH44644.1"
/db_xref="GeneID:116988"
/db_xref="HGNC:HGNC:16923"
/translation="MERGWPQGDSCPGERPAACRRAHSVCDSLDLHGASAGRAAAALQ
AALCAASEQPARPRSVCSGGPEPPPTGARGLLLGLLRPRLGRRGLAPSGPPVSPAPSP
ASSPAPTRRSRTRGEPTPRPRPASMTFLEVNRLELAAAEAPGAGLGRAGSAGFLRGAA
LWSSQRWPVLRGGRGPEGPRRGLAALRKSFSFRLRRGQEVRRSESGLLARPPRARTRS
DGDAGSLGAFPSRRDLLGSDAPRAAPEPGRPRTAAGLWRLLTSRFRRREPAPAAPLWS
RRAAAAPELLRAPSDSFVNSQEWTLSRSVPELKVGIVGNLSSGKSALVHRYLTGTYVQ
EESPEGGRFKKEIVVDGQSYLLLIRDEGGPPELQFAAWVDAVVFVFSLEDEISFQTVY
NYFLRLCSFRNASEVPMVLVGTQDAISAANPRVIDDSRARKLSTDLKRCTYYETCATY
GLNVERVFQDVAQKVVALRKKQQLAIGPCKSLPNSPSHSAVSAASIPAVHINQATNGG
GSAFSDYSSSVPSTPSISQRELRIETIAASSTPTPIRKQSKRRSNIFTICATVSNFSS
TKRPFQLLPN"
BASE COUNT 371 a 1024 c 875 g 423 t
ORIGIN
1 gccggaggtc cgtgcgcccc ggccgcggcc ccggcccggg cccagccccg tgcccctcgc
61 catgggcctg gcccgcgccc gccggccctg agcatggagc ggggctggcc gcagggggac
121 agctgtcccg gggagcggcc cgccgcttgc cgccgcgccc acagcgtctg cgactcgctg
181 gacctgcacg gcgcctcggc cggccgcgct gccgccgccc tgcaggccgc cctctgcgcc
241 gccagtgagc agccggcgcg gccgcggagc gtgtgctcgg gcggcccgga gccgccgccc
301 accggcgccc gcggcctttt gctcggcctc ctgcgcccgc gcctcggccg ccggggcctg
361 gcgccctcgg gaccgcccgt ctcgcctgcg cccagccccg cgtccagccc cgcgccgacc
421 cggcgcagcc gcacccgcgg ggagccgact ccgcggcccc ggccggccag catgactttc
481 ctggaggtga accgcctgga gctggcggcc gccgaggcgc cgggcgcggg tctggggcgc
541 gcgggcagcg cgggcttcct gcgcggcgcg gcgttgtgga gcagccagcg ctggccagtg
601 ctgcgcggcg ggcgcgggcc ggaggggccc cggcgcggcc tggcggcgct caggaagagc
661 ttcagcttcc gcctgcgccg cggccaggag gtgcggcgct ccgagtcagg gctgctggcc
721 cggccgcccc gcgcgcgcac ccgtagcgac ggcgacgccg gctccctagg cgccttcccc
781 agccgccgcg acctgctggg ctccgacgcc ccgcgcgcag cgccggagcc cggccgcccc
841 cgcaccgccg ccggcctctg gaggctgctc acgagccgct tccgccggag ggagcccgcg
901 cccgccgcgc cgctgtggag ccgtcgggcg gctgcggccc cggagctcct gcgcgcgccc
961 agcgactcgt ttgtgaacag ccaggagtgg acgctgagcc gctccgtacc ggagcttaaa
1021 gtgggcatag tggggaacct gtctagcggg aagtcagccc tggtgcaccg ctatctgacg
1081 gggacctatg tccaggagga gtcccctgaa ggggggcggt ttaagaagga gattgtggtg
1141 gatggccaga gttacctgct gctgatccga gatgaaggag gcccccctga gctccagttt
1201 gctgcctggg tggatgcagt ggtgtttgtg ttcagcctgg aggatgaaat cagtttccag
1261 acggtgtaca actacttcct gcgtctctgc agcttccgca acgccagcga ggtgcccatg
1321 gtgcttgtgg gcacgcagga tgccatcagc gctgcgaatc cccgggttat cgacgacagc
1381 agagcccgca agctctccac agatctgaag cggtgcacct actatgagac gtgcgcgacc
1441 tacgggctca atgtggagcg tgtcttccag gacgtggccc agaaggtagt ggccttgcga
1501 aagaagcagc aactggccat cgggccctgc aagtcactgc ccaactcgcc cagccactcg
1561 gccgtgtccg ccgcctccat cccggccgtg cacatcaacc aggccacgaa tggcggcggc
1621 agcgccttca gcgactactc gtcctcagtc ccctccaccc ccagcatcag ccagcgggag
1681 ctgcgcatcg agaccatcgc tgcctcctcc acccccacac ccatccgaaa gcagtccaag
1741 cggcgctcca acatcttcac gatatgtgcc actgtttcca acttttcatc aacaaaaagg
1801 cctttccaac tccttccaaa ttagaagacc agttggtgac acacagcacc tctggacatg
1861 ccccctgtgc ggggccggag gcgggccggg ccctgggact gctctcagat gagaagcggc
1921 cgccgagctc cccactccag agacccacgg gaacctttgt aactaacccc acccccaggg
1981 aaggctagga gcgccggagc ccgcgctggg ggctgccggg gaccaggccc ggccggacgc
2041 tgcaggctcg ctgcatggag aagaaggcag ctcggcccca cgcccggcgc tggccagcgc
2101 gacgaggccc agaggggcgg gggagtccaa gcccgcccgg cccggctgct cctggggggc
2161 gctttcctgc ccctcccctc ctctgctcct tcctgcatgg acctctgccg ttcctgctcc
2221 tgctccggaa gccgccgccg ccgccgcgct tgccttgccc cctctttttg gcctccccct
2281 atttcctagg atccgcattc gggtggactc tgccccagga gcttgacagg gtgcagggcc
2341 tcttctggcc tctctcctct ctctgtccat ccactgtgcc ccttgggcca cgccgacgcg
2401 ctcggtgcca cgtgccgtgt ggtgtctgtg ccgcagacgg gccatctgcc cgctcacttg
2461 tggactttgc gctcccggtt gtcgcgccct gtgctcccga ccagcagccc caccgtccac
2521 ctcctcgccc ccgcttctct tacgcccccg ccccgggcgt gctcctcgcg ccctcggcct
2581 ctctgtcctt gctcttttgt aaggggcggg cccggctcag tgacctgtgc tgctctgtat
2641 ggtgccgtgt gtaagaataa acccgttgga atactaaaaa aaaaaaaaaa aaa
//