LOCUS BC044581 2345 bp mRNA linear HUM 28-JUL-2005
DEFINITION Homo sapiens polycystic kidney disease 2-like 2, mRNA (cDNA clone
MGC:57172 IMAGE:4830805), complete cds.
ACCESSION BC044581
VERSION BC044581.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2345)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2345)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (17-JAN-2003) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Miklos Palkovits, M.D., Ph.D.
cDNA Library Preparation: Michael J. Brownstein (NHGRI) & Shiraki
Toshiyuki and Piero Carninci (RIKEN)
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Institute for Systems Biology
http://www.systemsbiology.org
contact: amadan@systemsbiology.org
Anup Madan, Jessica Fahey, Erin Helton, Mark Ketteman, Anuradha
Madan, Stephanie Rodrigues, Amy Sanchez and Michelle Whiting
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 106 Row: f Column: 13
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 7657458.
FEATURES Location/Qualifiers
source 1..2345
/db_xref="H-InvDB:HIT000052870"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:57172 IMAGE:4830805"
/tissue_type="Testis"
/clone_lib="NIH_MGC_97"
/lab_host="DH10B"
/note="Vector: pBluescriptR"
gene 1..2345
/gene="PKD2L2"
/db_xref="GeneID:27039"
/db_xref="MIM:604669"
CDS 56..1627
/gene="PKD2L2"
/codon_start=1
/product="PKD2L2 protein"
/protein_id="AAH44581.1"
/db_xref="GeneID:27039"
/db_xref="MIM:604669"
/translation="MAEASRWHRGGASKHKLHYRKEVEITTTLQELLLYFIFLINLCI
LTFGMVNPHMYYLNKVMSSLFLDTSVPGEERTNFKSIRSITDFWKFMEGPLLEGLYWD
SWYNNQQLYNLKNSSRIYYENILLGVPRVRQLKVRNNTCKVYSSFQSLMSECYGKYTS
ANEDLSNFGLQINTEWRYSTSNTNSPWHWGFLGVYRNGGYIFTLSKSKSETKNKFIDL
RLNSWITRGTRVIFIDFSLYNANVNLFCIIRLVAEFPATGGILTSWQFYSVKLLRYVS
YYDYFIASCEITFCIFLFVFTTQEVKKIKEFKSAYFKSIWNWLELLLLLLCFVAVSFN
TYYNVQIFLLLGQLLKSTEKYSDFYFLACWHIYYNNIIAITIFFAWIKNMFLAIINDT
YSEVKADYSIGRRPDFELGKMIKQSYKNVLEKFRLKKAQKDEDKKTKGSGDLAEQARR
EGFDENEIQNAEQMKKWKERLEKKYYSMEIQDDYQPVTQEEFRELFLYAVELEKELHY
INLKLNQVVRKVSAL"
BASE COUNT 787 a 398 c 449 g 711 t
ORIGIN
1 cgcgcaagcg ccgcggcctc aggcgaacga acgggcggtg tagtgcaggt ccgccatggc
61 tgaggcgtca cggtggcacc gaggcggggc ttcgaaacat aagttgcatt acagaaagga
121 agtagaaatt acaaccacac ttcaggaatt gttactctac tttatttttt taataaacct
181 atgtatattg acttttggga tggtaaaccc acatatgtat tacttaaaca aggttatgtc
241 atctctattt ttggacactt ctgtgcctgg tgaagaaaga accaacttta agtccattcg
301 cagcataact gatttttgga agtttatgga aggacccctt ttggaaggtc tgtactggga
361 ttcatggtac aataaccagc agctgtataa tttaaagaac agcagtcgca tctactatga
421 aaatatactt ctaggagttc ccagagttcg tcaactaaaa gtccgcaaca acacatgcaa
481 agtctattca tcttttcagt ctttgatgag tgaatgttat ggcaaatata cttctgcaaa
541 tgaagacctc tctaattttg gccttcaaat taatactgaa tggagatatt ctacttctaa
601 taccaactcc ccttggcact ggggatttct tggtgtttac cgaaatgggg gatacatttt
661 cactttatca aaatcgaaat ctgaaaccaa aaacaagttc attgaccttc gactgaacag
721 ctggatcaca agagggacta gagttatttt tattgatttt tccttatata atgctaatgt
781 aaatctattt tgtattatca gattggtggc agaattccct gcaactggag gaatacttac
841 ttcatggcag ttttactctg tgaagctcct cagatatgtt agctactatg actattttat
901 tgcttcctgt gaaatcacat tctgtatttt tctttttgtc ttcacaacac aagaagtcaa
961 aaaaataaaa gaatttaagt ctgcctattt caaaagtatt tggaactggc tagaattgct
1021 acttttgctg ttgtgttttg tggctgtttc cttcaacaca tactataatg tacaaatttt
1081 tctcttactt ggacagctgt tgaaaagtac tgaaaaatat tcagatttct attttcttgc
1141 atgctggcac atttattaca ataatataat tgctattacc atcttttttg catggataaa
1201 gaatatgttc ttggcaatta ttaatgatac ctattctgaa gtgaaagctg actattcaat
1261 aggcagaagg ccagattttg aacttggcaa aatgattaaa cagagttaca aaaatgttct
1321 cgagaaattc agactgaaga aagctcaaaa agatgaagac aagaaaacca aaggcagcgg
1381 agatttggct gaacaagcca gaagagaagg ctttgacgaa aatgagattc aaaacgcaga
1441 gcagatgaaa aaatggaaag agaggcttga gaaaaagtat tattctatgg aaattcaaga
1501 tgactaccag cctgtcactc aagaagaatt tcgagaactt tttttatatg ctgtggagct
1561 ggagaaggaa ttacactaca tcaatttgaa gctaaatcaa gtggtgagaa aggtttcagc
1621 tctatagtat tgagacaagt ggagtcattc tgtaagaaaa aggcaacaga agaattcagt
1681 atgaagattt tcctccaatt ttcttcagta atgagaaaca aaaagttggt aataacaaaa
1741 agcttgcatt tccaaagttc ttgaagttga aaggataaaa ttccagtctt ttgctaaaag
1801 gatgtatctg tagtacaaaa caatgaagta aaccatatgt ttgctaaagg tggagaggac
1861 agtctgtggt taatatggaa catcacttac gctcccttga gagggcctac ttactctccc
1921 atcatttgtt ttgtttagtg gcaccacaac caagtacaaa atgagattct ctgagtgcct
1981 gacaaaacga atttaagtac cagccaagta cacacgatga tagcttcaag gaatacaact
2041 gactttatga tatgaatttt caaggaacgt atcttatatg gattttgaag aatcttgttt
2101 gcttataaga acttcaagaa gcctaagctt ggctttaatt ttcttgtact ctctgtactc
2161 ctcaagcact ggaacacgat cctctttctg ggcattccta ggggagaaaa taaaatttgt
2221 aatgttctag agatcatttg gaaaaaaaga tccaaaagtt gtcttaatat gagacatact
2281 gttactaaac ataagttcaa ataaaaagtt gttctgttaa aaaaaaaaga aaaaaaaaaa
2341 aaaaa
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