LOCUS BC044213 2653 bp mRNA linear HUM 14-SEP-2006
DEFINITION Homo sapiens chromosome 13 open reading frame 34, mRNA (cDNA clone
IMAGE:6044695), partial cds.
ACCESSION BC044213
VERSION BC044213.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2653)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2653)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (13-JAN-2003) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 89 Row: m Column: 2.
FEATURES Location/Qualifiers
source 1..2653
/db_xref="H-InvDB:HIT000097818"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:6044695"
/tissue_type="Testis, embryonal carcinoma"
/clone_lib="NIH_MGC_92"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene <1..2653
/gene="C13orf34"
/gene_synonym="FLJ22624"
/gene_synonym="RP11-342J4.2"
/db_xref="GeneID:79866"
/db_xref="HGNC:HGNC:24724"
CDS <1..1578
/gene="C13orf34"
/gene_synonym="FLJ22624"
/gene_synonym="RP11-342J4.2"
/codon_start=1
/product="C13orf34 protein"
/protein_id="AAH44213.1"
/db_xref="GeneID:79866"
/db_xref="HGNC:HGNC:24724"
/translation="HEQTLASPSVFKSTKLPTPGKFRWSIDQLAVINPVEIDPEDIHR
QALYLSHSRIDKDVEDKRQKAIEEFFTKDVIVPSPWTDHEGKQLSQCHSSKCTNINSD
SPVGKKLTIHSEKSDAACQTLLSLPVDFNLENILGDYFRADEFADQSPGNLSSSSLRR
KLFLDGNGSISDSLPSASPGSPHSGVQTSLEMFYSIDLSPVKCRSPLQTPSSGQFSSS
PIQASAKKYSLGSITSPSPISSPTFSPIEFQIGETPLSEQRKFTVHSPDASSGTNSNG
ITNPCIRSPYIDGCSPIKNWSPMRLQMYSGGTQYRTSVIQIPFTLETQGEDEEDKENI
PSTDVSSPAMDAAGIHLRQFSNEASTHGTHLVVTAMSVTQNQSSASEKELALLQDVER
EKDNNTVDMVDPIEIADETTWIKEPVDNGSLPMTDFVSGIAFSIENSHMCMSPLAESS
VIPCESSNIQMDSGYNTQNCGSNIMDTVGAESYCKESDAQTCEVESKSQAFNMKQDHT
TQRCWMKTASPFQCSSP"
BASE COUNT 900 a 466 c 525 g 762 t
ORIGIN
1 catgaacaaa ctctcgccag tccttctgtt tttaaatcaa caaaattacc aactccaggg
61 aaatttagat ggtctattga tcaactagct gtaataaatc ctgtagaaat agacccagaa
121 gatattcatc gtcaagcttt atacttaagt cattctcgaa tagataaaga tgtggaagac
181 aaaagacaaa aagccattga agagtttttc actaaagatg tcatcgtacc ctctccttgg
241 actgatcatg aagggaaaca gctttcacaa tgtcattcca gtaaatgcac taacataaat
301 agtgactctc cagttggaaa aaagctgacc attcattctg agaaaagcga tgctgcttgt
361 cagacattgc tgtctcttcc tgtggatttt aatttagaaa atatattagg tgactatttt
421 agagctgatg aatttgcaga tcaatctcct ggaaacctca gttcttcatc cctcagaaga
481 aagctgtttt tagatgggaa cggaagcatc tccgactcct taccttcggc ttctcccgga
541 agtcctcaca gtggtgttca aacatcacta gagatgtttt attcaataga tttgtctcct
601 gtaaagtgta ggagcccctt gcagacacca agttcggggc agttttcttc tagccctatt
661 caggctagtg caaaaaaata cagcttggga agcataacta gtccttcgcc tatttcttca
721 cccactttct caccaattga atttcagata ggagagactc cactctcaga acaaaggaag
781 tttactgttc attctcctga tgcttcatct ggaacaaatt ctaatgggat aactaatccg
841 tgtatcagaa gtccttatat agatggctgc tcgccaatta aaaattggtc tcctatgaga
901 cttcagatgt atagtggtgg tactcagtat cggacctcag tgattcagat accttttact
961 cttgagactc aaggtgaaga tgaggaagat aaagagaata ttccttccac agatgtctca
1021 tcacccgcca tggatgctgc tggaatacac ctacggcagt ttagtaatga ggcttctacc
1081 catggtacac atttggttgt gactgccatg tctgttacac aaaatcagtc cagtgcttct
1141 gagaaagaat tagcactgtt gcaggatgtt gaaagggaga aagacaataa cactgtggat
1201 atggttgatc ctatagagat agcagatgag accacttgga ttaaggagcc ggttgataat
1261 ggcagtttac ccatgactga ttttgtaagt ggcattgcct tcagtattga aaactctcat
1321 atgtgcatgt cacctcttgc tgaaagcagt gtcattcctt gtgaaagcag taacattcag
1381 atggatagtg gctataatac gcagaattgt ggaagcaata ttatggatac agttggggca
1441 gaaagttact gcaaagaaag tgatgcacaa acatgtgaag ttgagagtaa atctcaagca
1501 tttaatatga agcaagacca cacaacacag aggtgttgga tgaaaacagc aagccctttt
1561 caatgcagca gtccatagaa tacctctgtc agaatcaaag actaagctta agagttcctc
1621 gcatatatcg ttgtgcacag gatcaacatg atggtgactg ggaaaaaatt acttcaagta
1681 acatgcttag ctttccctcc ttaatgtgaa aaatcaaggg cttactgaca taggaacaac
1741 agaaatgctc ctggaacttc aagttgctga attataagtt tattttttat caataaatat
1801 ttttatactt acattgagtg atgtgtttaa caacaaattg tgacagagct gagtgctcct
1861 atcttacagg gtcaatgaac tacttattaa gccttactgg tagcactgaa tttagcagtt
1921 ctgagaacat gtgaaactat gttaaaactg aaggcactat atatttttac ataaaagctt
1981 gaacatacag atgaattata acctatgtga agaaatctta gatataaaac taacttttca
2041 aagatacaaa agaaattaaa caggtttcct gaaattttag ttcttggtct gttcacctct
2101 gtggggaaaa ttcttagttc cagtgataac tgttctagtt actactttta agtatgtaaa
2161 tactagaaag gtagtactag tgacatcatc acgtgtattg ttatctatgg ggcaaatgtg
2221 tggtgcccag aataaaatat acctcatgcc tagggtaggg acatcctttc cagctcaaac
2281 gtgggtaggg atgtgggaga ataagaatgt gggagaacca agagaaaaag tggggctggg
2341 agagtggagt tcccgtaggg cataggcctg tgaagtaaca ctggggcaga tatgtatgtt
2401 atatacaact atttttttaa aaaacttata tccatgttgg gagtagatgg gtatataaca
2461 gtttggaaat actatctttg gagaatgtat ttttgtattt ataaatcaac ttttaaaaac
2521 tgtctcattc aaaagggaat aattcatatg tacccttagg aaataaagac ctgtgttatc
2581 aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa
2641 aaaaaaaaaa aaa
//