LOCUS BC043596 2726 bp mRNA linear HUM 15-NOV-2004
DEFINITION Homo sapiens Fanconi anemia, complementation group B, mRNA (cDNA
clone IMAGE:6013939), partial cds.
ACCESSION BC043596
VERSION BC043596.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2726)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2726)
AUTHORS Director MGC Project.
TITLE Direct Submission
JOURNAL Submitted (09-JAN-2003) National Institutes of Health, Mammalian
Gene Collection (MGC), Cancer Genomics Office, National Cancer
Institute, 31 Center Drive, Room 11A03, Bethesda, MD 20892-2590,
USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Steve Jones, Sarah Barber, Mabel Brown-John, Yaron Butterfield,
Andy Chan, Steve S. Chand, William Chow, Alison Cloutier, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Amara Masson, Mike R. Mayo, Josh Moran, Ryan Morin,
Teika Olson, Diana Palmquist, Anca Petrescu, Anna Liisa Prahbu,
Parvaneh Saeedi, JR Santos, Angelique Schnerch, Ursula Skalska,
Duane Smailus, Jeff Stott, Miranda Tsai, George Yang, Jacquie
Schein, Asim Siddiqui, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 89 Row: k Column: 16
This clone was selected for full length sequencing because it
passed the following selection criteria: GenomeScan gene
prediction.
FEATURES Location/Qualifiers
source 1..2726
/db_xref="H-InvDB:HIT000097785"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:6013939"
/tissue_type="Testis, embryonal carcinoma"
/clone_lib="NIH_MGC_92"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..>2726
/gene="FANCB"
/gene_synonym="FAAP95"
/gene_synonym="FAB"
/gene_synonym="FLJ34064"
/db_xref="GeneID:2187"
/db_xref="MIM:227660"
CDS 259..>2726
/gene="FANCB"
/gene_synonym="FAAP95"
/gene_synonym="FAB"
/gene_synonym="FLJ34064"
/codon_start=1
/product="FANCB protein"
/protein_id="AAH43596.1"
/db_xref="GeneID:2187"
/db_xref="MIM:227660"
/translation="MTSKQAMSSNEQERLLCYNGEVLVFQLSKGNFADKEPTKTPILH
VRRMVFDRGTKVFVQKSTGFFTIKEENSHLKIMCCNCVSDFRTGINLPYIVIEKNKKN
NVFEYFLLILHSTNKFEMRLSFKLGYEMKDGLRVLNGPLILWRHVKAFFFISSQTGKV
VSVSGNFSSIQWAGEIENLGMVLLGLKECCLSEEECTQEPSKSDYAIWNTKFCVYSLE
SQEVLSDIYIIPPAYSSVVTYVHICATEIIKNQLRISLIALTRKNQLISFQNGTPKNV
CQLPFGDPCAVQLMDSGGGNLFFVVSFISNNACAVWKESFQVAAKWEKLSLVLIDDFI
GSGTEQVLLLFKDSLNSDCLTSFKITDLGKINYSSEPSDCNEDDLFEDKQENRYLVVP
PLETGLKVCFSSFRELRQHLLLKEKIISKSYKALINLVQGKDDNTSSAEEKECLVPLC
GEEENSVHILDEKLSDNFQDSEQLVEKIWYRVIDDSLVVGVKTTSSLKLSLNDVTLSL
LMDQAHDSRFRLLKCQNRVIKLSTNPFPAPYLMPCEIGLEAKRVTLTPDSKKEESFVC
EHPSKKECVQIITAVTSLSPLLTFSKFCCTVLLQIMERESGNCPKDRYVVCGRVFLSL
EDLSTGKYLLTFPKKKPIEHMEDLFALLAAFHKSCFQITSPGYALNSMKVWLLEHMKC
EIIKEFPEVYFCERPGSFYGTLFTWKQRTPFEGILIIYSRNQTVMFQCLHNLIRILPI
NCFLKNLKSGSENFLIDNMAFTLEKELVTLSSLSSAIAKHESNFMQRCEVSKGKSSVV
AAALSDRRENIHPYRKELQRKKKK"
BASE COUNT 884 a 463 c 541 g 838 t
ORIGIN
1 cgggaggttt ggagcagatg gataccgtat cgacgtgggg cctccggtat gttgccgctg
61 cgttgagttt cataagtaca agccacacct ttgatttacc taccctatct tctttactga
121 tgaagctgaa actactttgt gatgcctatt gtcccagatc tttctgttaa ttgcctaaca
181 acaaaccagt ttagaaacat caactggaat caatttgcat ttgaaaatta gatcagcaca
241 aagacttgat attgtggaat gactagcaaa caagcaatgt catctaacga acaagaaagg
301 ctcttgtgtt ataatgggga agtccttgtt ttccagttgt ctaaaggaaa ttttgcagat
361 aaagagccta caaaaacacc catattacat gtcagaagaa tggtatttga cagaggaaca
421 aaagtatttg ttcagaagtc cactggattt tttaccataa aggaagaaaa ctctcattta
481 aaaatcatgt gttgcaactg tgtgtcagat ttcagaactg gaattaacct cccttacatt
541 gtgatagaaa aaaataaaaa gaataatgtt tttgaatatt ttttactaat ccttcacagt
601 actaataaat ttgaaatgcg tttgagtttt aaactaggct atgagatgaa ggatggccta
661 agggtcctta atggcccttt aattttatgg aggcatgtca aagcattctt ctttatctct
721 tctcaaactg gcaaagttgt tagtgtgtca ggtaactttt cctctattca gtgggcaggg
781 gagattgaaa atttaggtat ggttttattg ggactaaagg aatgttgttt atctgaggaa
841 gaatgtactc aagagccttc aaaatcagat tatgcaattt ggaataccaa attttgtgta
901 tattctcttg aaagtcaaga agtattaagt gatatataca ttattcctcc tgcttacagc
961 agtgtggtga cttatgtaca tatttgtgca actgagatca tcaaaaacca gttaagaata
1021 tctctcattg cccttactcg aaagaatcag ctgatttcat ttcagaatgg aactcctaaa
1081 aatgtgtgcc agcttccatt tggagatcct tgtgcagttc aacttatgga ttcaggtgga
1141 ggaaacctct ttttcgttgt atcctttata tccaataatg cttgtgctgt atggaaagag
1201 agctttcagg ttgctgctaa atgggaaaaa cttagcttag tactgataga tgactttatt
1261 ggaagtggaa ctgaacaagt actcctactt tttaaggact ccttgaactc agactgcctg
1321 acttcattta aaataacgga tcttggaaaa ataaactatt cgagtgaacc atcagattgc
1381 aatgaagatg acttatttga agacaaacaa gagaatcgtt acctggtggt tccacctcta
1441 gaaacaggac tgaaagtttg tttttcttct tttcgggaat tacggcagca tctgttgctt
1501 aaggaaaaaa ttatttcaaa atcttacaaa gctttaataa acctagttca aggaaaagat
1561 gataatacgt caagtgcaga ggagaaggaa tgtcttgttc ctctttgtgg tgaagaagaa
1621 aattctgtcc atatcttaga tgaaaagtta tcagacaatt ttcaagattc agaacagcta
1681 gtagagaaga tatggtatcg tgtaatagat gatagcttgg ttgttggagt gaaaactaca
1741 tcttctttga agctgtccct gaatgatgtg actttatcat tgttaatgga tcaagcccat
1801 gactccagat ttcggcttct aaagtgtcaa aatagggtga ttaagttgag tacaaatcct
1861 ttcccagcac catacttgat gccatgtgaa ataggattgg aagcaaaaag ggtcacgttg
1921 acccctgata gcaagaaaga ggaaagcttt gtttgtgaac acccatctaa gaaagagtgt
1981 gtacagataa ttactgctgt aacatctctt tcaccacttt taacattcag taaattttgt
2041 tgcactgtac tgctacaaat tatggagaga gaaagtggta actgtcctaa agatcgttat
2101 gttgtgtgtg gcagagtttt tttaagtcta gaagatcttt caactgggaa gtacctactg
2161 acatttccaa agaagaaacc tatagagcac atggaagatc tttttgcact tcttgcagca
2221 ttccataaat cttgttttca aatcacatca cccggctatg ccctgaattc aatgaaggtg
2281 tggctcttag aacatatgaa atgtgaaata atcaaagaat ttccagaagt gtacttttgt
2341 gaaagaccgg gaagtttcta tgggacactc ttcacttgga aacagagaac accattcgaa
2401 gggattttaa taatctattc caggaatcaa acagttatgt tccagtgcct tcataatctc
2461 atcagaattc tccctataaa ctgtttcctc aaaaatctaa aatcaggaag tgagaatttc
2521 ctaattgata atatggcatt tactttggag aaggaactag tcacccttag ttctctttct
2581 tctgccatag ctaaacatga aagcaatttt atgcagaggt gtgaagtgag caaaggaaag
2641 agtagtgtcg tcgcggctgc tttatcagac agaagggaaa atatccatcc ctacagaaaa
2701 gaacttcaga gaaaaaaaaa aaaaaa
//