LOCUS BC043441 3092 bp mRNA linear HUM 28-JUL-2005
DEFINITION Homo sapiens protocadherin alpha 6, mRNA (cDNA clone
IMAGE:5297539).
ACCESSION BC043441
VERSION BC043441.2
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 3092)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 3092)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (09-JAN-2003) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Aug 25, 2003 this sequence version replaced BC043441.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Miklos Palkovits, M.D., Ph.D.
cDNA Library Preparation: Michael J. Brownstein (NHGRI) & Shiraki
Toshiyuki and Piero Carninci (RIKEN)
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 76 Row: o Column: 18.
FEATURES Location/Qualifiers
source 1..3092
/db_xref="H-InvDB:HIT000097690"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:5297539"
/tissue_type="Testis"
/clone_lib="NIH_MGC_97"
/lab_host="DH10B"
/note="Vector: pBluescriptR"
BASE COUNT 871 a 723 c 610 g 888 t
ORIGIN
1 agttcatagg cccacacgtt ctcgcggtcc agggcgctgt ccagcaccaa cgagtagtaa
61 ttcttgaagg tggacaccag cttgaaggga acgtggggcg tcagcgagca ggtcacctgt
121 ccgttgacac ctgagtcacg gtcagacacg ctgatcaggg caatgaccgt gctgggctga
181 gcgtcctctc gtactgggag ggacaaggaa gtcacggcga cttcaggaga gttatcgttg
241 gtgtccaaga tttccaccca gactgtacag tgacctgcca ttgggggagt ccccttatct
301 gtagcctgta cttcaatttt ataaaacttg ttttcttcat aatctaaagt tccattgacc
361 ctcacttctc cattattttg atctagtgta aataagtgtc ttccattggg cttaattgac
421 atcaaggagt atgttacctc tccattgact ccttcgtctc ggtctgtggc gtttagtttg
481 agcacaagag tttctttagc agcattttcc ataaggctca ccttatattc tgatttatca
541 aactctggat cattgtcgtt gacatccaag acttggacta acagccgaac ggtgccagta
601 agctctggtt ttcccccgtc tgtagctgtt agcagcaaat taagttccgg agttttctct
661 ctatccagag acttctttaa aataagtgac agtcttttaa tctgcttacc atttgttggt
721 gaatctaaag gaaaatactc atttttactt agcctgtagg tcaatagagc attctcttca
781 atgtcagcat cagaagctcc ctctagtgga aaacgcgagt ccgattgctt agattccgca
841 atcagcagct tttgttctct gagcgagaac accggcgggt tgtcgttaat gtccttcacc
901 tccacgttca catggaaaac ctgcagcggc ctgtccacga tcacctccag gtggatgctg
961 cactccgcgc tctgcccgca cagctcctcg cggtcgatcc gagaattcac aaacaaaatg
1021 ccattctgca gatttacctc cagaaggtcc ccatgtgttt tggacgccac ccggaacagg
1081 cgctgcacca gctccgccag ctccagcccc aggtcctgcg cgatgcggcc cacgaaggtg
1141 ccgtgtttgg cctcctccga gacggagtag tggagctggc cgctccccac ctcccagaat
1201 tcgaggagga gaagccagag ctgtagtcgt ggggtgccca atccccttct ctgaaaacca
1261 aacatcgcat acgaaattgg cttccaaaat aagcttcttt acacttacag taccagattc
1321 ttcagtttca ggttaaaaat ctcgttgaat tcttaagaag tttcaaagga tccttaaacg
1381 gtggcatccg gtatgatgga gttcctttgt atggaagtgc ctcactgttc agaccaacct
1441 ttaaatgaac tttccaccaa gtaaagagcg acaccttgcg cctaaaactg taaaatattc
1501 agtggaatca agactgtaag tcaacaacga atttgttccg atatctgcat ctgatgcgcc
1561 ctctagcgaa aaccgagagc caggctgtcg ggattcggaa ataaacagat tctttacagc
1621 cattggaaaa actggcgcgt tgtcattaat gtccttcact tccacctcca catggaaaac
1681 ctgcagcggc ctgtccacga tcacctccag gtggatgctg cactccgcgc tccgcccgca
1741 cagttcctcg cggtctatcc gagaattcac aaacaaaatg ccattctgca gatttacctc
1801 cagaaggtcc ccgtgtcttt tggacgccac ccggaacagg cgcggcacca gctccgccag
1861 ctccagcccc aggtcctgcg cgatgcggcc cacgaaggtg ccatgcttgg cctcctcaga
1921 gacggagtag tggagctggc cgctccccac ctccgaggct gcgaggagca gaagagaaag
1981 cagcaggcac tgggctccag gatcttctcg ccaggagaac aacattagag gatgaagcaa
2041 agcagtatct gaatacgtaa tgcacgctgt tatttctttt gtggagaaag accttgtggt
2101 ggacagcgac atcatgtggc taaacgtgta agtattaaat atgtaaacgt atcttctttt
2161 ccttgtatgt cgtttgaact ttcccaaaat ttctagtttc aattgtaata tccttcggtc
2221 actcctcaaa gtccttatat tttatctaaa tatttcctta gaacttttat actaattcac
2281 tatcaattgt gctaattcat gacatacact aaaatattgt gattcctgtt ttaacagtgg
2341 acatctattg gaaatatttc ccatgtgaca gccacttttc tatttgtctt aatggaatta
2401 tcccgttaaa ttatcacaat cctctgaaat aagttttaat attattcgct ttttataaac
2461 acatagaggt taagtaaaac gatattatct cttggtacga tgggatttca atctgattca
2521 agacaactta ccattaacct ctttaccacc caagttacat tttatagaaa aatcagatcc
2581 tttcagattt atgatcatca aaacattgag atgttgaagt atttaaaagt gtgtgtgtgc
2641 tgtatatatt aaaacataca tatatctact tttatgttat tacagcaact gttaatttct
2701 taaaatatgt acatttatgg ttttttaaat ttgtagaatg tctgtaattc cctcccatgc
2761 ccctttttca agaactatag cctcatcaac tgtcttgact gtaacttaca taaagatttc
2821 agaagtcggt cctttacaga gaaattcaaa caggaaattt gtttcctatt gtgggaatgt
2881 gatttgtata tttgttacac tcacatcaca tcaattaaga atatattagg tttaattttt
2941 ccacactctt tatgtatttg aatttacctg tatatactaa aatgttaaca atataaagta
3001 attacgtttt tgatgatctc caaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa
3061 aaaaaaaaaa aaaaagaaaa aaaaaaaaaa aa
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