LOCUS BC043437 2040 bp mRNA linear HUM 17-JUL-2006
DEFINITION Homo sapiens DCP1 decapping enzyme homolog B (S. cerevisiae), mRNA
(cDNA clone MGC:44405 IMAGE:5296928), complete cds.
ACCESSION BC043437
VERSION BC043437.2
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2040)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2040)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (09-JAN-2003) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Sep 16, 2003 this sequence version replaced BC043437.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Miklos Palkovits, M.D., Ph.D.
cDNA Library Preparation: Michael J. Brownstein (NHGRI) & Shiraki
Toshiyuki and Piero Carninci (RIKEN)
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 76 Row: m Column: 23
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 40548402.
FEATURES Location/Qualifiers
source 1..2040
/db_xref="H-InvDB:HIT000052814"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:44405 IMAGE:5296928"
/tissue_type="Testis"
/clone_lib="NIH_MGC_97"
/lab_host="DH10B"
/note="Vector: pBluescriptR"
gene 1..2040
/gene="DCP1B"
/gene_synonym="DCP1"
/gene_synonym="hDcp1b"
/db_xref="GeneID:196513"
/db_xref="HGNC:HGNC:24451"
/db_xref="MIM:609843"
CDS 43..1899
/gene="DCP1B"
/gene_synonym="DCP1"
/gene_synonym="hDcp1b"
/codon_start=1
/product="DCP1 decapping enzyme homolog B (S. cerevisiae)"
/protein_id="AAH43437.1"
/db_xref="GeneID:196513"
/db_xref="HGNC:HGNC:24451"
/db_xref="MIM:609843"
/translation="MAAVAAGGLVGKGRDISLAALQRHDPYINRIVDVASQVALYTFG
HRANEWEKTDVEGTLFVYTRSASPKHGFTIMNRLSMENRTEPITKDLDFQLQDPFLLY
RNARLSIYGIWFYDKEECQRIAELMKNLTQYEQLKAHQGTGAGISPVILNSGEGKEVD
ILRMLIKAKDEYTKCKTCSEPKKITSSSAIYDNPNLIKPIPVKPSENQQQRIPQPNQT
LDPEPQHLSLTALFGKQDKATCQETVEPPQTLHQQQQQQQQQQQEKLPIRQGVVRSLS
YEEPRRHSPPIEKQLCPAIQKLMVRSADLHPLSELPENRPCENGSTHSAGEFFTGPVQ
PGSPHNIGTSRGVQNASRTQNLFEKLQSTPGAANKCDPSTPAPASSAALNRSRAPTSV
TPVAPGKGLAQPPQAYFNGSLPPQTVGHQAHGREQSTLPRQTLAISGSQTGSSGVISP
QELLKKLQIVQQEQQLHASNRPALAAKFPVLAQSSGTGKPLESWINKTPNTEQQTPLF
QVISPQRIPATAAPSLLMSPMVFAQPTSVPPKERESGLLPVGGQEPPAAATSLLLPIQ
SPEPSVITSSPLTKLQLQEALLYLIQNDDNFLNIIYEAYLFSMTQAAMKKTM"
BASE COUNT 575 a 580 c 459 g 426 t
ORIGIN
1 ggcttccaag agccccgtgc ctatgtctgg gagggaggga agatggcagc cgtggcggca
61 ggcggcctgg tgggaaaggg gcgcgacatc agcctagcgg ccctgcagcg ccacgacccc
121 tatatcaacc gcatcgtgga cgtggccagc caggtggctc tgtacacctt cggccatcgg
181 gccaacgagt gggagaaaac tgatgtggaa ggaaccttat ttgtttatac aaggtctgct
241 tctccaaagc atggattcac cattatgaat aggctgagca tggaaaatag gacagaacct
301 attactaaag acttggattt ccaactccag gaccctttcc ttctctacag aaatgccaga
361 ttgtccatct atggaatttg gttttatgat aaggaagaat gccaaagaat tgcagagctt
421 atgaaaaacc taactcagta tgaacagttg aaagcccatc agggaactgg agcaggaatt
481 tcaccagtga tcctcaattc aggagagggc aaagaagtag acattttacg aatgctcatc
541 aaggccaaag acgaatacac aaagtgtaaa acctgttctg agccaaaaaa gataaccagt
601 tcctctgcca tctatgacaa tccaaatctc atcaaaccaa ttccagtgaa acccagtgaa
661 aaccagcaac agcgtatacc tcagcccaac cagaccttag accctgaacc ccaacactta
721 tccttgacag ctctgtttgg gaagcaggac aaagctacat gtcaggaaac tgtggagcct
781 ccgcagactc tccaccagca gcagcagcag cagcagcagc agcagcaaga gaagcttcca
841 attaggcagg gggttgtacg ctccctgtcc tatgaggaac ccagaagaca ctcacccccc
901 attgagaagc agctctgtcc agccattcag aaactcatgg tcaggagcgc agacctccac
961 ccattgtcag agctgcctga aaaccggcct tgtgaaaatg gcagtaccca ttctgcggga
1021 gaatttttta caggacctgt ccagccaggg tctcctcaca acattggaac ttctcgtggt
1081 gtacaaaatg cttccagaac tcagaacctg ttcgagaaac ttcagagtac cccaggggca
1141 gcaaacaagt gtgaccctag tacaccagca cctgccagct cagctgccct gaaccgcagc
1201 agagctccca cttctgtcac ccctgtggct ccaggaaagg gtctggctca gccaccacag
1261 gcctatttca atggctccct tccacctcag acagtaggac atcaggctca tggaagagaa
1321 cagtccacac tcccaagaca aacactcgcc atctctggta gtcagactgg cagctctgga
1381 gtgatctccc ctcaagagtt actgaagaag cttcagattg tacagcagga gcagcagctg
1441 catgcctcta accggccagc cttggccgct aagtttcctg tgctcgctca gagctctgga
1501 acagggaaac ccttggaatc ctggatcaac aagacaccca acacagaaca gcagactcct
1561 cttttccagg tcatctcacc tcagcgcatc cctgctacag cagctccgtc tctgcttatg
1621 tcccccatgg tgttcgcaca acccacctcc gtcccgccaa aggaaaggga gagcggcctc
1681 ttgcctgtgg gaggccagga gccacctgct gctgccacca gcctcctcct gcccatacag
1741 agcccggagc cctccgtgat caccagcagc ccactcacca agctccagct ccaggaggca
1801 ctgctgtacc tcattcagaa tgatgacaac ttcttaaata taatctatga agcctatctc
1861 ttcagcatga ctcaagcagc catgaaaaag actatgtgac agcaaggcct tttaaaactg
1921 attttcaagg tccttctaga actccggcac aaggttcttt catgttgagt gttgtttcct
1981 tcaatgtttc tgcctttttt aaaagaaaag tatgtgtaat acgaaaaaaa aaaaaaaaaa
//