LOCUS BC043429 2596 bp mRNA linear HUM 03-AUG-2005
DEFINITION Homo sapiens similar to HIV TAT specific factor 1; cofactor
required for Tat activation of HIV-1 transcription, mRNA (cDNA
clone IMAGE:5289038).
ACCESSION BC043429
VERSION BC043429.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2596)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2596)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (09-JAN-2003) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Miklos Palkovits, M.D., Ph.D.
cDNA Library Preparation: Michael J. Brownstein (NHGRI) & Shiraki
Toshiyuki and Piero Carninci (RIKEN)
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 76 Row: f Column: 8.
FEATURES Location/Qualifiers
source 1..2596
/db_xref="H-InvDB:HIT000097679"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:5289038"
/tissue_type="Brain, hypothalamus"
/clone_lib="NIH_MGC_96"
/lab_host="DH10B"
/note="Vector: pBluescriptR"
BASE COUNT 678 a 521 c 596 g 801 t
ORIGIN
1 agcgggggta ccacactttc tttatccagt ccgctgttga tgggcacgtg ggttgattcc
61 atgtctttgc tactgtaaat agttctgtga tgaacataca agtgcaggca tcttttcata
121 gaatgatttt tttttttcct tttggtagat acccagtaat gggattgctg ggttgaaggg
181 taattctatt tttagcaaac tagaaatatt taatgaagta catgaatgag tgtcttcaga
241 attgtacaca gtgagatcaa atattttaat aatgagcttg ttatgttgaa ttctattctg
301 accatcattc actgagattt tcttttcttt cttttttaaa gagacagagt ttcgctatgt
361 tgcccaggct ggtctcagac cccttgcctc aaataatctt cccaccttgg gcctcccaag
421 gtgctgggat tgcaggtgtg agccaccaca cctggcccag attttcttta atatttgtct
481 aatatctttc catctcccta tattcaagct tcatgtaatt ttattttctg gtaattctct
541 gagcatagag ctggatttgc tagttttttt attttatgac tcaacatgag agtttctatt
601 tttcatagaa aagttgaatc tgggcctgtt tcttaatttt cttctttgtc tttttaaatt
661 tacattagga ctatgaagtt ttaattgaac agccattaac atatatggtt atatgttgca
721 tgatgtttca atcagtgatg gactgcatgt acgatggtgg tcccctaaga ttataatgcc
781 atgttttgtt tattaaaatt tatttaagat ttattttatt atttttatag atgaggtctc
841 gctctgttgc cccagctggg tgcagtggca tgatcatggc tcactgggct caagtgatcc
901 tcctgcctca gcatccctgg tgactgggac tgcaggcgcg tgctaccacg cctggctgat
961 tattttaatt tttggtagag acaggatctc attgtgttgc ccaggctggt cttgaactcc
1021 tggtctcaag cagtccaccc acctcagctt ccccaagtgc tgggattaca ggcgtgagct
1081 gcctgcacct gggctaatac agtaatttta ctgtaccttt tccatgttta gatacagaga
1141 tacctattat tgtgttacag ttgcctacag tattcagtac agtaacatct ctacaggttt
1201 atagccaagg gcaataggct ctaccataaa gcctgggtgt gtagtaggct gtaccatcta
1261 ggtttgtgta agtgcattct atgatgtttg cgtgacaatg aaatcaacta attatgaaat
1321 cacttaatga tacatttctc agaatgtatc tcttttgtta agtgaaacat tacaaaattt
1381 atttttttgg gcacagtggc tcactcctgt aatcccagca ctttgggagg ccaaggcggg
1441 catgccgatc acgaggtcat ctcctacagg cagtgcacat tgactaagtt cattccttgc
1501 ttttgttgtt gtttgctatt ataaatagga ttttgtcttc aattatatct tctaaaagtt
1561 cttttgattg gtaaaagcta ttgattgctg aatattggtt tttgaccccg accgtttgct
1621 gttttctcct cctaatcata attttttctt agttggtttc cagtaataaa gtcatgttgt
1681 ctgaggccgg gtgcggtggc tcacgcctgt aatcccagca ctctgggagg ctgaggtggc
1741 ggatcgagac caccctggct aacacggtga aaccctgtct ctactaaaaa tacaaatgtt
1801 tagccgggtc tggtggcggg cgcctgtggt cccggctacc cgggaggctg aagcaggaga
1861 atggcgtgaa gctgggaagc agagcttgca gtgagccgag attgtgccac tgcactccag
1921 cctgggtgac agagcgagac tctgtcaaaa aaaaaaaaaa aaattaatgg ctgggcactg
1981 tgggtcatgc ctgtaatccc agcaatttgg gaggctgaga tgggataact gcttgaggcc
2041 gggagttcaa gaccagcttg ggcaacataa tgagacccat ctctacaaaa aatttaaaaa
2101 tatacattag ttaggcatgg tggcacgcac ctgtaattcc agctactcgg gaggctgaag
2161 caagagggtc acgtgagtcc aggagttcaa ggctgcaatg agccatgact gtgtcactgc
2221 actccagcct ggatgacaga gcgagactct ttttaaaaat agccaggcgt gatggctctc
2281 acctggaatc ccagcatttt tggaggctga gatgggcaga ttgcttgagt tcagcagttt
2341 gaggccagcc tgggcaacat ggcgaaaccc caaccctata aaaaaaaaaa aaaaattagc
2401 caggtgtggt ggcacgcatc tgcggtccca ggtacttggg aggctgaggt gagagaatcg
2461 ctcgagctgg gaggcagagg ttgcagtgag ctgagatcac accactgcac tccagccttg
2521 ggtgacggaa tgagacctgt ctcaaaaaac aaataaataa ataaaaataa tttaaaaatc
2581 aaaaaaaaaa aaaaaa
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