LOCUS BC043403 2479 bp mRNA linear HUM 13-JAN-2004
DEFINITION Homo sapiens SH3 domain containing, Ysc84-like 1 (S. cerevisiae),
mRNA (cDNA clone IMAGE:6045172), partial cds.
ACCESSION BC043403
VERSION BC043403.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2479)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2479)
AUTHORS Strausberg,R.
TITLE Direct Submission
JOURNAL Submitted (09-JAN-2003) National Institutes of Health, Mammalian
Gene Collection (MGC), Cancer Genomics Office, National Cancer
Institute, 31 Center Drive, Room 11A03, Bethesda, MD 20892-2590,
USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Steven Jones, Jennifer Asano, Ian Bosdet, Yaron Butterfield,
Susanna Chan, Readman Chiu, Chris Fjell, Erin Garland, Ran Guin,
Letticia Hsiao, Martin Krzywinski, Reta Kutsche, Oliver Lee, Soo
Sen Lee, Victor Ling, Carrie Mathewson, Candice McLeavy, Steven
Ness, Pawan Pandoh, Anna-Liisa Prabhu, Parvaneh Saeedi, Jacqueline
Schein, Duane Smailus, Michael Smith, Lorraine Spence, Jeff Stott,
Michael Thorne, Miranada Tsai, Natasja van den Bosch, Jill Vardy,
George Yang, Scott Zuyderduyn, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 89 Row: m Column: 4
This clone was selected for full length sequencing because it
passed the following selection criteria: Hexamer frequency ORF
analysis.
FEATURES Location/Qualifiers
source 1..2479
/db_xref="H-InvDB:HIT000097658"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:6045172"
/tissue_type="Testis, embryonal carcinoma"
/clone_lib="NIH_MGC_92"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
BASE COUNT 792 a 492 c 502 g 693 t
ORIGIN
1 cggaaaactt tattctcaag agatttctca ttccgcagaa ataaggatct ggcatgtcaa
61 cacaaacata ggaagttgag gcagtcaaag ggaaataact gctaccctga ctctgctgag
121 agcctcacaa gtccctgtgc acgccagctt gtttgccaaa aaagatgttg ctggtccatt
181 tgatgaagaa gtccagagcg gcttgtgact tcagtctggc tttgcagagc ccaggtgctc
241 tctccacctt ctgccaggtt cccctacgaa ggctttgctc tcagactctc cccttgtgga
301 gacaaaaatc ccacagcaag tggaaacaga agtgccttgg aaaaagttat tctggcagct
361 cctatacaag tcccccatca gatgctggta ttggaccagc tttggttata aagccctgct
421 gtggcaccaa aaggaatgtc gtcctgatac agcagcctcg ggtcacccaa tccactccag
481 atactatggc tgcagcatca atgtaagcag acaagttgtg ctgcctctga aataaagtag
541 atgaaatatt cagcagcaga aagaacaagt ttccactcca gtgaactaat tcaaatgtat
601 ccagcatcta gatatatgta taaatgtaat taaaacatat tgagcatcta gagcatctct
661 cccaagataa ttaccacctg atagtaatgg ctataaaagc taaaagtgga atcagtctac
721 atgtttcgca ataggaatca attgaagcat acatcaaaat gcagacagta gtattgtgaa
781 taaccctata ccttccaatt tgaaatcaga agcaaaaaag gctgccaaaa tattaagaga
841 attcacagaa ataacttcca gaaatggacc tgataagatc attcctgctc acgtaattgc
901 gaaggctaaa ggccttgcaa ttctgtctgt gatcaaagcc gggttcctgg tgactgccag
961 aggaggcagc gggattgtag tggcgcgcct tccagatgga aaatggtctg caccctcagc
1021 cattgggata gctggccttg gtggaggatt tgaaatagga attgagacac atttacagct
1081 acatattccc tctgagcatt gccctggctg ccttccataa gtgtaggtat cagacttggt
1141 gataattctg aattatgacc gtgctgtaga agcttttgca aaaggcggaa atctgaccct
1201 cggagggaac ttgactgtgg cggttgggcc cttgggaagg aacttggaag gaaacgtggc
1261 cctgagaagc tccgctgccg tcttcacgta ctgcaagtca aggggactct ttgcaggcgt
1321 gtctttagaa gggagctgtt tgattgaaag gaaagaaact aatagaaaat tttattgtca
1381 agatatccga gcttatgaca ttttatttgg agatacaccg cggcctgctc aagccgaaga
1441 tctttatgaa attcttgatt cctttactga aaagtatgaa aatgaaggac aacgaatcaa
1501 tgcaagaaaa gcagcaaggg agcagaggaa gtcttctgct aaagaattac ctccaaagcc
1561 attgtcaaga ccacagcagt catctgcacc agtccagctg aactctggct ctcaaagcaa
1621 tttgaatcaa cccatagaag tgacagcgct gtattcattt gaaggacagc agcctgggga
1681 tttgaatttt caagctggag acagaatcac agttatatca aaaacagatt cacattttga
1741 ttggtgggaa ggaaaacttc gaggtcaaac tggcattttt ccagccaact acgtaaccat
1801 gaattaaagc gtatactatt ttcttctttg agaattacaa aaaaattatt tctacactga
1861 caggatttac tagttaagca atgtttaata taaattttaa aaaacttctg ttctacaaaa
1921 tttccattcc gtatgtaaaa gattttgttt ttctatataa aaagagctga ctgacatatc
1981 tttaaatact ttgtactaac tttatcacac ttactgtgtc atagaatatc atacagttta
2041 tacgctcata gttctcttgt gaacacttca aacatcgcta agcatttgat ctggccatgt
2101 atatggtagc tgtgttttaa tttgagaatc ttgagggtag agccacaaat ttcaattctt
2161 acatttccat ttgcaaagtg actagagaaa aagaaatcag cttaaatgag gtattaagta
2221 atgtttagag tcgtaggtat taactagaat ataaatcctt agaaattgtc tttatacctt
2281 caaaaattat actatgcatt tatcatagaa atgtgattac aaagaagtct gactaccatg
2341 tctttaaaca tatggcatct ctcaactttt cttccttatg gggctacatt tgttcatttc
2401 cagcagtagc ataaacttac ggtgacatgg tagacttgtc tctaaataaa atttttaaat
2461 gtttaaaaaa aaaaaaaaa
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