LOCUS BC043367 1672 bp mRNA linear HUM 08-JUL-2008
DEFINITION Homo sapiens calcium homeostasis modulator 3, mRNA (cDNA clone
MGC:50049 IMAGE:5110383), complete cds.
ACCESSION BC043367
VERSION BC043367.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1672)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1672)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (09-JAN-2003) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 87 Row: d Column: 7
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 32698827.
FEATURES Location/Qualifiers
source 1..1672
/db_xref="H-InvDB:HIT000052803"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:50049 IMAGE:5110383"
/tissue_type="Cervix, carcinoma"
/clone_lib="NIH_MGC_12"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..1672
/gene="CALHM3"
/gene_synonym="bA225H22.7"
/db_xref="GeneID:119395"
/db_xref="HGNC:HGNC:23458"
CDS 209..1261
/gene="CALHM3"
/gene_synonym="bA225H22.7"
/codon_start=1
/product="calcium homeostasis modulator 3"
/protein_id="AAH43367.1"
/db_xref="GeneID:119395"
/db_xref="HGNC:HGNC:23458"
/translation="MDKFRMLFQHFQSSSESVMNGICLLLAAVTVKLYSSFDFNCPCL
VHYNALYGLGLLLTPPLALFLCGLLANRQSVVMVEEWRRPAGHRRKDPGIIRYMCSSV
LQRALAAPLVWILLALLDGKCFVCAFSSSVDPEKFLDFANMTPSQVQLFLAKVPCKED
ELVRDSPARKAVSRYLRCLSQAIGWSVTLLLIIAAFLARCLRPCFDQTVFLQRRYWSN
YVDLEQKLFDETCCEHARDFAHRCVLHFFASMRSELQARGLRRGNAGRRLELPAVPEP
PAVPEPPEGLDSGSGKAHLRAISSREQVDRLLSTWYSSKPPLDLAASPGLCGGGLSHR
APTLALGTRLSQHTDV"
BASE COUNT 318 a 519 c 488 g 347 t
ORIGIN
1 gcctgtccct gccttaagtg cctactggat cccgggagcc tgggctgggg cctgggcact
61 gcttcctcct tggcccctca ggcccttgga agcagagaga gaacctcttg cagatcccag
121 gctcgtcccc agcacagcag acaccaggaa ggtggccaga gcctcactga gccgaaccga
181 cggccgccta cccacccagg ctggagccat ggataaattc cgcatgctct tccagcactt
241 ccagtcaagc tcggagtcgg tgatgaatgg catctgcctg ctgctggctg cggtcaccgt
301 caagctgtac tcctcctttg acttcaactg tccctgcctg gtgcactaca atgcactcta
361 cggcctgggc ctgctgctga cgcccccgct cgccctgttt ctctgcggcc tcctcgccaa
421 ccggcagtct gtggtgatgg tcgaggagtg gcgccggccc gcagggcacc ggaggaagga
481 cccaggcatc atcaggtaca tgtgctcctc tgtgctgcag agggcgctgg ccgcccccct
541 ggtctggatc ctgctggccc tccttgacgg gaagtgcttc gtgtgtgcct tcagcagctc
601 tgtggaccct gagaagtttc tggactttgc caacatgacc cccagccagg tacagctctt
661 cctggccaag gttccctgca aggaggatga gctggtcagg gatagccctg ctcggaaggc
721 agtgtctcgc tacctgcggt gcctgtcaca ggccatcggc tggagcgtca ccctgctgct
781 gatcatcgcg gccttcctgg cccgctgcct gaggccctgc ttcgaccaga cagtcttcct
841 gcagcgcaga tactggagca actacgtgga cctggagcag aagctcttcg acgagacctg
901 ctgtgagcat gcgcgggact tcgcgcaccg ctgcgtgctg cacttctttg ccagcatgcg
961 gagtgagctg caggcgcggg ggctgcgccg gggcaatgca ggcaggagac tcgagctccc
1021 cgcagtgcct gagccccccg cagtgcctga gcccccagaa ggcctggata gtggaagtgg
1081 gaaggcccac ctgcgcgcaa tctccagccg ggagcaggtg gaccgcctcc taagcacgtg
1141 gtactccagc aagccgccgc tggacctggc tgcatccccc gggctctgcg ggggtggcct
1201 tagccaccgc gcccctacct tggcactggg cacgaggctg tcacaacaca ccgacgtgta
1261 gggtcctggc caggcttgaa gcggcagtgt tcgcaggtga aatgccgcgc tgacaaagtt
1321 ctggagtctt tccaggccgt ggggacccca cggcaggcac cctaagtctt gttagcctcc
1381 tttttaaagt agcccaatct ctgcctagtt tctgggtgtg gcctccagcg cgcttcacag
1441 actttaatgt ggactcggtt caccgagggc cttgttaaat acaggttcag acagtgtagc
1501 caggaccgag tctgagattc tgcattttaa acaagctcct ggaggctgat gtgcttttgg
1561 tcagtgaacc aaactttgag tagcaagaat ctaagtaaat ctgccatggg ttctgggttc
1621 tagatgtcaa ttctaaataa taataatgac cttaaaaaaa aaaaaaaaaa aa
//