LOCUS BC043350 2693 bp mRNA linear HUM 15-JUL-2006 DEFINITION Homo sapiens protein kinase C, delta, mRNA (cDNA clone MGC:49908 IMAGE:5539909), complete cds. ACCESSION BC043350 VERSION BC043350.1 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 2693) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 2693) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (09-JAN-2003) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: ATCC/DCTD/DTP cDNA Library Preparation: Life Technologies, Inc. cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Genome Sequence Centre, BC Cancer Agency, Vancouver, BC, Canada info@bcgsc.bc.ca Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao, Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang, Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAK Plate: 89 Row: e Column: 6 This clone was selected for full length sequencing because it passed the following selection criteria: matched mRNA gi: 47157323. FEATURES Location/Qualifiers source 1..2693 /db_xref="H-InvDB:HIT000052799" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:49908 IMAGE:5539909" /tissue_type="Skin, melanotic melanoma." /clone_lib="NIH_MGC_72" /lab_host="DH10B" /note="Vector: pCMV-SPORT6" gene 1..2693 /gene="PRKCD" /gene_synonym="MAY1" /gene_synonym="MGC49908" /gene_synonym="nPKC-delta" /db_xref="GeneID:5580" /db_xref="HGNC:HGNC:9399" /db_xref="MIM:176977" CDS 373..2403 /gene="PRKCD" /gene_synonym="MAY1" /gene_synonym="MGC49908" /gene_synonym="nPKC-delta" /codon_start=1 /product="protein kinase C, delta" /protein_id="AAH43350.1" /db_xref="GeneID:5580" /db_xref="HGNC:HGNC:9399" /db_xref="MIM:176977" /translation="MAPFLRIAFNSYELGSLQAEDEANQPFCAVKMKEALSTERGKTL VQKKPTMYPEWKSTFDAHIYEGRVIQIVLMRAAEEPVSEVTVGVSVLAERCKKNNGKA EFWLDLQPQAKVLMSVQYFLEDVDCKQSMRSEDEAKFPTMNRRGAIKQAKIHYIKNHE FIATFFGQPTFCSVCKDFVWGLNKQGYKCRQCNAAIHKKCIDKIIGRCTGTAANSRDT IFQKERFNIDMPHRFKVHNYMSPTFCDHCGSLLWGLVKQGLKCEDCGMNVHHKCREKV ANLCGINQKLLAEALNQVTQRASRRSDSASSEPVGIYQGFEKKTGVAGEDMQDNSGTY GKIWEGSSKCNINNFIFHKVLGKGSFGKVLLGELKGRGEYFAIKALKKDVVLIDDDVE CTMVEKRVLTLAAENPFLTHLICTFQTKDHLFFVMEFLNGGDLMYHIQDKGRFELYRA TFYAAEIMCGLQFLHSKGIIYRDLKLDNVLLDRDGHIKIADFGMCKENIFGESRASTF CGTPDYIAPEILQGLKYTFSVDWWSFGVLLYEMLIGQSPFHGDDEDELFESIRVDTPH YPRWITKESKDILEKLFEREPTKRLGVTGNIKIHPFFKTINWTLLEKRRLEPPFRPKV KSPRDYSNFDQEFLNEKARLSYSDKNLIDSMDQSAFAGFSFVNPKFEHLLED" BASE COUNT 630 a 782 c 756 g 525 t ORIGIN 1 cggagcgtgg gccgccccct cgcacttccg tgtgccgcgg cgccggagcc cgaggcggct 61 gtagcccaca tctcccgagc gacccccggc gcccgcccgc cgcgcggagg cccgggccac 121 acctcactgg ccgcttggcc catcccagtc agcgccgcgc cgaaccccgt ccgcgcgcgc 181 cggggagcgg cgcccccgcc gctgccgccg cgacccttgg cgcctgcccc tgcaacggga 241 ggtctgcagg gaactggcca ggcaaggggg caggcccgtt tctcctggtg gttggtgcgt 301 tgtagcagca gcgggagcca ggactaagga caagcaggag ctgggagccc cagccccact 361 gcaggcccca ccatggcgcc gttcctgcgc atcgccttca actcctatga gctgggctcc 421 ctgcaggccg aggacgaggc gaaccagccc ttctgtgccg tgaagatgaa ggaggcgctc 481 agcacagagc gtgggaaaac actggtgcag aagaagccga ccatgtatcc tgagtggaag 541 tcgacgttcg acgcccacat ctatgagggg cgcgtcatcc agattgtgct aatgcgggca 601 gcagaggagc cagtgtctga ggtgaccgtg ggtgtgtcgg tgctggccga gcgctgcaag 661 aagaacaatg gcaaggctga gttctggctg gacctgcagc ctcaggccaa ggtgttgatg 721 tctgttcagt atttcctgga ggacgtggat tgcaaacagt ctatgcgcag tgaggacgag 781 gccaagttcc caacgatgaa ccgccgcgga gccatcaaac aggccaaaat ccactacatc 841 aagaaccatg agtttatcgc caccttcttt gggcaaccca ccttctgttc tgtgtgcaaa 901 gactttgtct ggggcctcaa caagcaaggc tacaaatgca ggcaatgtaa cgctgccatc 961 cacaagaaat gcatcgacaa gatcatcggc agatgcactg gcaccgcggc caacagccgg 1021 gacactatat tccagaaaga acgcttcaac atcgacatgc cgcaccgctt caaggttcac 1081 aactacatga gccccacctt ctgtgaccac tgcggcagcc tgctctgggg actggtgaag 1141 cagggattaa agtgtgaaga ctgcggcatg aatgtgcacc ataaatgccg ggagaaggtg 1201 gccaacctct gcggcatcaa ccagaagctt ttggctgagg ccttgaacca agtcacccag 1261 agagcctccc ggagatcaga ctcagcctcc tcagagcctg ttgggatata tcagggtttc 1321 gagaagaaga ccggagttgc tggggaggac atgcaagaca acagtgggac ctacggcaag 1381 atctgggagg gcagcagcaa gtgcaacatc aacaacttca tcttccacaa ggtcctgggc 1441 aaaggcagct tcgggaaggt gctgcttgga gagctgaagg gcagaggaga gtactttgcc 1501 atcaaggccc tcaagaagga tgtggtcctg atcgacgacg acgtggagtg caccatggtt 1561 gagaagcggg tgctgacact tgccgcagag aatccctttc tcacccacct catctgcacc 1621 ttccagacca aggaccacct gttctttgtg atggagttcc tcaacggggg ggacctgatg 1681 taccacatcc aggacaaagg ccgctttgaa ctctaccgtg ccacgtttta tgccgctgag 1741 ataatgtgtg gactgcagtt tctacacagc aagggcatca tttacaggga cctcaaactg 1801 gacaatgtgc tgttggaccg ggatggccac atcaagattg ccgactttgg gatgtgcaaa 1861 gagaacatat tcggggagag ccgggccagc accttctgcg gcacccctga ctatatcgcc 1921 cctgagatcc tacagggcct gaagtacaca ttctctgtgg actggtggtc tttcggggtc 1981 cttctgtacg agatgctcat tggccagtcc cccttccatg gtgatgatga ggatgaactc 2041 ttcgagtcca tccgtgtgga cacgccacat tatccccgct ggatcaccaa ggagtccaag 2101 gacatcctgg agaagctctt tgaaagggaa ccaaccaaga ggctgggagt gacgggaaac 2161 atcaaaatcc accccttctt caagaccata aactggactc tgctggaaaa gcggaggttg 2221 gagccaccct tcaggcccaa agtgaagtca cccagagact acagtaactt tgaccaggag 2281 ttcctgaacg agaaggcgcg cctctcctac agcgacaaga acctcatcga ctccatggac 2341 cagtctgcat tcgctggctt ctcctttgtg aaccccaaat tcgagcacct cctggaagat 2401 tgaggttcct ggacagatca ggctagccct gccctccacc cacacctgcc cgctccccac 2461 gataagcacc agtgggactg tggtgacttc tgctgctggc cccgcccctg cccccagagc 2521 gtccttggct gccgtctggc cgggctctca tggtacttcc tctgtgaact gtgtgtgaat 2581 ctgcttttcc tctgccttcg gagggaaatt gtaaatcctg tgtttcatta cttgaatgta 2641 gttatctatt gaaaatatat attatataca tagaaaaaaa aaaaaaaaaa aaa //