LOCUS       BC043348                3780 bp    mRNA    linear   HUM 15-JUL-2006
DEFINITION  Homo sapiens retinitis pigmentosa 2 (X-linked recessive), mRNA
            (cDNA clone MGC:49904 IMAGE:5520795), complete cds.
ACCESSION   BC043348
VERSION     BC043348.2
KEYWORDS    MGC.
SOURCE      Homo sapiens (human)
  ORGANISM  Homo sapiens
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
            Catarrhini; Hominidae; Homo.
REFERENCE   1  (bases 1 to 3780)
  AUTHORS   Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
            Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
            Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
            Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
            Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
            Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
            Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
            Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
            Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
            McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
            Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
            Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
            Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
            Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
            Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
            Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
            Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
            Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
  CONSRTM   Mammalian Gene Collection Program Team
  TITLE     Generation and initial analysis of more than 15,000 full-length
            human and mouse cDNA sequences
  JOURNAL   Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
   PUBMED   12477932
REFERENCE   2  (bases 1 to 3780)
  CONSRTM   NIH MGC Project
  TITLE     Direct Submission
  JOURNAL   Submitted (09-JAN-2003) National Institutes of Health, Mammalian
            Gene Collection (MGC), Bethesda, MD 20892-2590, USA
  REMARK    NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT     On Aug 25, 2003 this sequence version replaced BC043348.1.
            Contact: MGC help desk
            Email: cgapbs-r@mail.nih.gov
            Tissue Procurement: ATCC
            cDNA Library Preparation: Life Technologies, Inc.
            cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
            DNA Sequencing by: Genome Sequence Centre,
            BC Cancer Agency, Vancouver, BC, Canada
            info@bcgsc.bc.ca
            Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
            Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
            Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
            Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
            Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
            Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
            Kim MacDonald,  Mike R. Mayo, Josh Moran, Diana Palmquist, JR
            Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
            Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
            
            Clone distribution: MGC clone distribution information can be found
            through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
            Series: IRAK Plate: 89 Row: d Column: 4
            This clone was selected for full length sequencing because it
            passed the following selection criteria: matched mRNA gi: 5902059.
FEATURES             Location/Qualifiers
     source          1..3780
                     /db_xref="H-InvDB:HIT000052798"
                     /organism="Homo sapiens"
                     /mol_type="mRNA"
                     /db_xref="taxon:9606"
                     /clone="MGC:49904 IMAGE:5520795"
                     /tissue_type="Uterus, leiomyosarcoma"
                     /clone_lib="NIH_MGC_71"
                     /lab_host="DH10B"
                     /note="Vector: pCMV-SPORT6"
     gene            1..3780
                     /gene="RP2"
                     /gene_synonym="TBCCD2"
                     /db_xref="GeneID:6102"
                     /db_xref="HGNC:HGNC:10274"
                     /db_xref="MIM:312600"
     CDS             112..1164
                     /gene="RP2"
                     /gene_synonym="TBCCD2"
                     /codon_start=1
                     /product="retinitis pigmentosa 2 (X-linked recessive)"
                     /protein_id="AAH43348.1"
                     /db_xref="GeneID:6102"
                     /db_xref="HGNC:HGNC:10274"
                     /db_xref="MIM:312600"
                     /translation="MGCFFSKRRKADKESRPENEEERPKQYSWDQREKVDPKDYMFSG
                     LKDETVGRLPGTVAGQQFLIQDCENCNIYIFDHSATVTIDDCTNCIIFLGPVKGSVFF
                     RNCRDCKCTLACQQFRVRDCRKLEVFLCCATQPIIESSSNIKFGCFQWYYPELAFQFK
                     DAGLSIFNNTWSNIHDFTPVSGELNWSLLPEDAVVQDYVPIPTTEELKAVRVSTEANR
                     SIVPISRGQRQKSSDESCLVVLFAGDYTIANARKLIDEMVGKGFFLVQTKEVSMKAED
                     AQRVFREKAPDFLPLLNKGPVIALEFNGDGAVEVCQLIVNEIFNGTKMFVSESKETAS
                     GDVDSFYNFADIQMGI"
BASE COUNT         1170 a          628 c          712 g         1270 t
ORIGIN      
        1 ccgcggggcg ttgtccggag agctgcgagg ccggggttcc cagggttcac gccacactct
       61 aggaagtgcc tgagctagtg agctggccaa cgagctccgc gggctgggac catgggctgc
      121 ttcttctcca agagacggaa ggctgacaag gagtcgcggc ccgagaacga ggaggagcgg
      181 ccaaagcagt acagctggga tcagcgcgag aaggttgatc caaaagacta catgttcagt
      241 ggactgaagg atgaaacagt aggtcgctta cctgggacgg tagcaggaca acagtttctc
      301 attcaagact gtgagaactg taacatctat atttttgatc actctgctac agttaccatt
      361 gatgactgta ctaactgcat aatttttctg ggacccgtga aaggcagcgt gtttttccgg
      421 aattgcagag attgcaagtg cacattagcc tgccaacaat ttcgtgtgcg agattgtaga
      481 aagctggaag tctttttgtg ttgtgccact caacccatca ttgagtcttc ctcaaatatc
      541 aaatttggat gttttcaatg gtactatcct gaattagctt tccagttcaa agatgcaggg
      601 ctaagtatct tcaacaatac atggagtaac attcatgact ttacacctgt gtcaggagaa
      661 ctcaactgga gccttcttcc agaagatgct gtggttcagg actatgttcc tatacctact
      721 accgaagagc tcaaagctgt tcgtgtttcc acagaagcca atagaagcat tgttccaata
      781 tcccggggtc agagacagaa gagcagcgat gaatcatgct tagtggtatt atttgctggt
      841 gattacacta ttgcaaatgc cagaaaacta attgatgaga tggttggtaa aggctttttc
      901 ctagttcaga caaaggaagt gtccatgaaa gctgaggatg ctcaaagggt ttttcgggaa
      961 aaagcacctg acttccttcc tcttctgaac aaaggtcctg ttattgcctt ggagtttaat
     1021 ggggatggtg ctgtagaagt atgtcaactt attgtaaacg agatattcaa tgggaccaag
     1081 atgtttgtat ctgaaagcaa ggagacggca tctggagatg tagacagctt ctacaacttt
     1141 gctgatatac agatgggaat atgaagtgca atgtggaacc aggacttggt attaagcctt
     1201 tcccaacttg tgaatataga atttgataat acacttttgt gtattagcaa tggtttttac
     1261 taatgctaaa acttttaaag tttatttttt aataaattgt tgagtattac atcatttact
     1321 tgaggttcaa aaataattca ttttaaatta agtagtttta atcagcttaa aagctattta
     1381 acccatttta ataagcttgc agttttgttt ctctgcatat gatattctta ttagaaaaca
     1441 gaagtagcta aaagtttatt attttaatcc tatttaaatg ttctttcaaa tctctaataa
     1501 tttaaacttt cctcagtgct ccatgatact ttttttgaga ctccatatca ttgcttattt
     1561 tacctttttc aatttagagg gatttgttac tagtcgatca attagaatga acctatgcac
     1621 atttttatgt acacatatcc agttatataa ttgcttccta gttgcattat atggcaaatg
     1681 agattttgta catggagttg acataatact ttgtaaattg aattttttaa agaaataggc
     1741 atttgataac cagcttggca agtaactcta ctaacagatg ttggtatagc tatttaaaga
     1801 ctacttcgta agtagtatga ttatttgaat aaattacaca ttgtttagtt ttttaataca
     1861 actgctatat gactcttctg cttcctgata agaaaaggta tatgcaatgc taaaactgta
     1921 gaagcccaat caccagcagt ttttaaaaag gtgataactt ttattagctc ttgtgggcta
     1981 tcaagagaat tagaacaaaa ccttgtgact tttaggtaag aaataggcat gatgataagc
     2041 tatgcagatt attaaaaagc ttgatacatt tgatttttca ttagatatgc cattcatatc
     2101 aagtaatgtt caagtatgat aaaattattt tggttgcttt aaagcactgt ttcccaaatc
     2161 tacctgatca taataattta ccaggaagca gaggagagct acttgtttaa aaatccacat
     2221 tcttggaccc aatcctcaga tgcacggatt cagtcttcag gggaaactct gttttaaggg
     2281 gtatgttgta atctaaagta attggttcag gaggtgtcaa taggttgaac ttgtgagaag
     2341 gcactgaatc tgccatccac atcacatata gcagctatta tgaaatcagc tttcataggc
     2401 ctatttttaa aaggaatctg aaatttaatt ctattttgat aaaactaaga ctgaaaataa
     2461 ccacttgtaa acattcctat gattgttact aaaatgtatt ttcatgttta aaatgttttt
     2521 ggatattttt gggttaataa ctactacatt gaattgcatg ttaaggtgca gaaataatac
     2581 attaaaagat tttcacttta aattaattag taatattgag cgctcaccct gtgcgtggcc
     2641 ttgtgctaac cattagcact gcatcatttc aattctttta taagggcatt caatactaca
     2701 aaatcaacat gatttcataa ggtgcaaata aaagttggtg acagatttaa tataattttg
     2761 atcacaattt acaaatgatc tttgcaaata gtggtcagac ggcattagtt tttcccttag
     2821 ttaagctaaa ttaaagggac tccatcctgt tatgattata ttattattat tattattatt
     2881 atttttgagg tggagtttca ctcttgttgc ccaagctgga gtgcaatggc gcgatctcgg
     2941 ctcaccacaa catccgcctc ctgggttcaa gcgattctcc tgcctcagcc tcctgagtag
     3001 ctgggaatac aggcatgcgc cactacacct ggctaatttt tgtattttta gttgagatgg
     3061 ggtttttcca cgttggtcag gctggtctcg aactcctgac ctcaggtgat ccgtccacct
     3121 cagcctccca aagagctggg attacaggtg tgagctaccg cgcctggcca tgatgatatt
     3181 attaaacacc attattcaca tttcaaataa taacaatact ttttgttttt caaaaataaa
     3241 atgcaatgtt atataaagct ataaactaag ttctttatga tatttgagca acaactcagg
     3301 aatataacat ataagggaga tgttaattta aaaatttcca ctacacttat tatctattaa
     3361 ccaaagctta aaattttgta ttcttctgtt agataagacc ttttacccat ttaatttgtc
     3421 tttaaggaca gtcatttggc ttctgaatgt ttgaaacgat tttaaaaaat aagtagtgct
     3481 atggttgttt ctataattct aacctttgat agtaatcaga atgtattaca tttcatttct
     3541 gaatagcttt tgaatttatg aaaaattatt aacaatgaaa aattggtaat tttattaagt
     3601 tatatgtgtt taaatattat attagcttat ttctcttgca ttaatagtac tgctgttttt
     3661 gttttgcttc tttatattta tgtctagctt ttatatgtaa tttatctagt gtttataaaa
     3721 tgtgatttgt aataaatgtt gttaaaatga aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa
//