LOCUS BC043348 3780 bp mRNA linear HUM 15-JUL-2006 DEFINITION Homo sapiens retinitis pigmentosa 2 (X-linked recessive), mRNA (cDNA clone MGC:49904 IMAGE:5520795), complete cds. ACCESSION BC043348 VERSION BC043348.2 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 3780) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 3780) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (09-JAN-2003) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT On Aug 25, 2003 this sequence version replaced BC043348.1. Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: ATCC cDNA Library Preparation: Life Technologies, Inc. cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Genome Sequence Centre, BC Cancer Agency, Vancouver, BC, Canada info@bcgsc.bc.ca Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao, Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang, Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAK Plate: 89 Row: d Column: 4 This clone was selected for full length sequencing because it passed the following selection criteria: matched mRNA gi: 5902059. FEATURES Location/Qualifiers source 1..3780 /db_xref="H-InvDB:HIT000052798" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:49904 IMAGE:5520795" /tissue_type="Uterus, leiomyosarcoma" /clone_lib="NIH_MGC_71" /lab_host="DH10B" /note="Vector: pCMV-SPORT6" gene 1..3780 /gene="RP2" /gene_synonym="TBCCD2" /db_xref="GeneID:6102" /db_xref="HGNC:HGNC:10274" /db_xref="MIM:312600" CDS 112..1164 /gene="RP2" /gene_synonym="TBCCD2" /codon_start=1 /product="retinitis pigmentosa 2 (X-linked recessive)" /protein_id="AAH43348.1" /db_xref="GeneID:6102" /db_xref="HGNC:HGNC:10274" /db_xref="MIM:312600" /translation="MGCFFSKRRKADKESRPENEEERPKQYSWDQREKVDPKDYMFSG LKDETVGRLPGTVAGQQFLIQDCENCNIYIFDHSATVTIDDCTNCIIFLGPVKGSVFF RNCRDCKCTLACQQFRVRDCRKLEVFLCCATQPIIESSSNIKFGCFQWYYPELAFQFK DAGLSIFNNTWSNIHDFTPVSGELNWSLLPEDAVVQDYVPIPTTEELKAVRVSTEANR SIVPISRGQRQKSSDESCLVVLFAGDYTIANARKLIDEMVGKGFFLVQTKEVSMKAED AQRVFREKAPDFLPLLNKGPVIALEFNGDGAVEVCQLIVNEIFNGTKMFVSESKETAS GDVDSFYNFADIQMGI" BASE COUNT 1170 a 628 c 712 g 1270 t ORIGIN 1 ccgcggggcg ttgtccggag agctgcgagg ccggggttcc cagggttcac gccacactct 61 aggaagtgcc tgagctagtg agctggccaa cgagctccgc gggctgggac catgggctgc 121 ttcttctcca agagacggaa ggctgacaag gagtcgcggc ccgagaacga ggaggagcgg 181 ccaaagcagt acagctggga tcagcgcgag aaggttgatc caaaagacta catgttcagt 241 ggactgaagg atgaaacagt aggtcgctta cctgggacgg tagcaggaca acagtttctc 301 attcaagact gtgagaactg taacatctat atttttgatc actctgctac agttaccatt 361 gatgactgta ctaactgcat aatttttctg ggacccgtga aaggcagcgt gtttttccgg 421 aattgcagag attgcaagtg cacattagcc tgccaacaat ttcgtgtgcg agattgtaga 481 aagctggaag tctttttgtg ttgtgccact caacccatca ttgagtcttc ctcaaatatc 541 aaatttggat gttttcaatg gtactatcct gaattagctt tccagttcaa agatgcaggg 601 ctaagtatct tcaacaatac atggagtaac attcatgact ttacacctgt gtcaggagaa 661 ctcaactgga gccttcttcc agaagatgct gtggttcagg actatgttcc tatacctact 721 accgaagagc tcaaagctgt tcgtgtttcc acagaagcca atagaagcat tgttccaata 781 tcccggggtc agagacagaa gagcagcgat gaatcatgct tagtggtatt atttgctggt 841 gattacacta ttgcaaatgc cagaaaacta attgatgaga tggttggtaa aggctttttc 901 ctagttcaga caaaggaagt gtccatgaaa gctgaggatg ctcaaagggt ttttcgggaa 961 aaagcacctg acttccttcc tcttctgaac aaaggtcctg ttattgcctt ggagtttaat 1021 ggggatggtg ctgtagaagt atgtcaactt attgtaaacg agatattcaa tgggaccaag 1081 atgtttgtat ctgaaagcaa ggagacggca tctggagatg tagacagctt ctacaacttt 1141 gctgatatac agatgggaat atgaagtgca atgtggaacc aggacttggt attaagcctt 1201 tcccaacttg tgaatataga atttgataat acacttttgt gtattagcaa tggtttttac 1261 taatgctaaa acttttaaag tttatttttt aataaattgt tgagtattac atcatttact 1321 tgaggttcaa aaataattca ttttaaatta agtagtttta atcagcttaa aagctattta 1381 acccatttta ataagcttgc agttttgttt ctctgcatat gatattctta ttagaaaaca 1441 gaagtagcta aaagtttatt attttaatcc tatttaaatg ttctttcaaa tctctaataa 1501 tttaaacttt cctcagtgct ccatgatact ttttttgaga ctccatatca ttgcttattt 1561 tacctttttc aatttagagg gatttgttac tagtcgatca attagaatga acctatgcac 1621 atttttatgt acacatatcc agttatataa ttgcttccta gttgcattat atggcaaatg 1681 agattttgta catggagttg acataatact ttgtaaattg aattttttaa agaaataggc 1741 atttgataac cagcttggca agtaactcta ctaacagatg ttggtatagc tatttaaaga 1801 ctacttcgta agtagtatga ttatttgaat aaattacaca ttgtttagtt ttttaataca 1861 actgctatat gactcttctg cttcctgata agaaaaggta tatgcaatgc taaaactgta 1921 gaagcccaat caccagcagt ttttaaaaag gtgataactt ttattagctc ttgtgggcta 1981 tcaagagaat tagaacaaaa ccttgtgact tttaggtaag aaataggcat gatgataagc 2041 tatgcagatt attaaaaagc ttgatacatt tgatttttca ttagatatgc cattcatatc 2101 aagtaatgtt caagtatgat aaaattattt tggttgcttt aaagcactgt ttcccaaatc 2161 tacctgatca taataattta ccaggaagca gaggagagct acttgtttaa aaatccacat 2221 tcttggaccc aatcctcaga tgcacggatt cagtcttcag gggaaactct gttttaaggg 2281 gtatgttgta atctaaagta attggttcag gaggtgtcaa taggttgaac ttgtgagaag 2341 gcactgaatc tgccatccac atcacatata gcagctatta tgaaatcagc tttcataggc 2401 ctatttttaa aaggaatctg aaatttaatt ctattttgat aaaactaaga ctgaaaataa 2461 ccacttgtaa acattcctat gattgttact aaaatgtatt ttcatgttta aaatgttttt 2521 ggatattttt gggttaataa ctactacatt gaattgcatg ttaaggtgca gaaataatac 2581 attaaaagat tttcacttta aattaattag taatattgag cgctcaccct gtgcgtggcc 2641 ttgtgctaac cattagcact gcatcatttc aattctttta taagggcatt caatactaca 2701 aaatcaacat gatttcataa ggtgcaaata aaagttggtg acagatttaa tataattttg 2761 atcacaattt acaaatgatc tttgcaaata gtggtcagac ggcattagtt tttcccttag 2821 ttaagctaaa ttaaagggac tccatcctgt tatgattata ttattattat tattattatt 2881 atttttgagg tggagtttca ctcttgttgc ccaagctgga gtgcaatggc gcgatctcgg 2941 ctcaccacaa catccgcctc ctgggttcaa gcgattctcc tgcctcagcc tcctgagtag 3001 ctgggaatac aggcatgcgc cactacacct ggctaatttt tgtattttta gttgagatgg 3061 ggtttttcca cgttggtcag gctggtctcg aactcctgac ctcaggtgat ccgtccacct 3121 cagcctccca aagagctggg attacaggtg tgagctaccg cgcctggcca tgatgatatt 3181 attaaacacc attattcaca tttcaaataa taacaatact ttttgttttt caaaaataaa 3241 atgcaatgtt atataaagct ataaactaag ttctttatga tatttgagca acaactcagg 3301 aatataacat ataagggaga tgttaattta aaaatttcca ctacacttat tatctattaa 3361 ccaaagctta aaattttgta ttcttctgtt agataagacc ttttacccat ttaatttgtc 3421 tttaaggaca gtcatttggc ttctgaatgt ttgaaacgat tttaaaaaat aagtagtgct 3481 atggttgttt ctataattct aacctttgat agtaatcaga atgtattaca tttcatttct 3541 gaatagcttt tgaatttatg aaaaattatt aacaatgaaa aattggtaat tttattaagt 3601 tatatgtgtt taaatattat attagcttat ttctcttgca ttaatagtac tgctgttttt 3661 gttttgcttc tttatattta tgtctagctt ttatatgtaa tttatctagt gtttataaaa 3721 tgtgatttgt aataaatgtt gttaaaatga aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa //