LOCUS       BC043277                3045 bp    mRNA    linear   HUM 28-JUL-2005
DEFINITION  Homo sapiens synaptojanin 2, mRNA (cDNA clone MGC:44422
            IMAGE:5297160), complete cds.
ACCESSION   BC043277
VERSION     BC043277.2
KEYWORDS    MGC.
SOURCE      Homo sapiens (human)
  ORGANISM  Homo sapiens
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
            Catarrhini; Hominidae; Homo.
REFERENCE   1  (bases 1 to 3045)
  AUTHORS   Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
            Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
            Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
            Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
            Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
            Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
            Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
            Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
            Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
            McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
            Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
            Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
            Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
            Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
            Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
            Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
            Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
            Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
  CONSRTM   Mammalian Gene Collection Program Team
  TITLE     Generation and initial analysis of more than 15,000 full-length
            human and mouse cDNA sequences
  JOURNAL   Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
   PUBMED   12477932
REFERENCE   2  (bases 1 to 3045)
  CONSRTM   NIH MGC Project
  TITLE     Direct Submission
  JOURNAL   Submitted (09-JAN-2003) National Institutes of Health, Mammalian
            Gene Collection (MGC), Bethesda, MD 20892-2590, USA
  REMARK    NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT     On Aug 25, 2003 this sequence version replaced BC043277.1.
            Contact: MGC help desk
            Email: cgapbs-r@mail.nih.gov
            Tissue Procurement: Miklos Palkovits, M.D., Ph.D.
            cDNA Library Preparation: Michael J. Brownstein (NHGRI) &  Shiraki
            Toshiyuki and Piero Carninci (RIKEN)
            cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
            DNA Sequencing by: Genome Sequence Centre,
            BC Cancer Agency, Vancouver, BC, Canada
            info@bcgsc.bc.ca
            Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
            Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
            Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
            Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
            Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
            Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
            Kim MacDonald,  Mike R. Mayo, Josh Moran, Diana Palmquist, JR
            Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
            Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
            
            Clone distribution: MGC clone distribution information can be found
            through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
            Series: IRAK Plate: 76 Row: n Column: 6.
FEATURES             Location/Qualifiers
     source          1..3045
                     /db_xref="H-InvDB:HIT000052790"
                     /organism="Homo sapiens"
                     /mol_type="mRNA"
                     /db_xref="taxon:9606"
                     /clone="MGC:44422 IMAGE:5297160"
                     /tissue_type="Testis"
                     /clone_lib="NIH_MGC_97"
                     /lab_host="DH10B"
                     /note="Vector: pBluescriptR"
     gene            1..3045
                     /gene="SYNJ2"
                     /gene_synonym="INPP5H"
                     /gene_synonym="KIAA0348"
                     /db_xref="GeneID:8871"
                     /db_xref="MIM:609410"
     CDS             411..2930
                     /gene="SYNJ2"
                     /gene_synonym="INPP5H"
                     /gene_synonym="KIAA0348"
                     /codon_start=1
                     /product="SYNJ2 protein"
                     /protein_id="AAH43277.1"
                     /db_xref="GeneID:8871"
                     /db_xref="MIM:609410"
                     /translation="MGGKAGNKGAVGIRFQFHSTSFCFICSHLTAGQSQVKERNEDYK
                     EITQKLCFPMGRNVFSHDYVFWCGDFNYRIDLTYEEVFYFVKRQDWKKLLEFDQLQLQ
                     KSSGKIFKDFHEGAINFGPTYKYDVGSAAYDTSDKCRTPAWTDRVLWWRKKHPFDKTA
                     GELNLLDSDLDVDTKVRHTWSPGALQYYGRAELQASDHRPVLAIVEVEVQEVDVGARE
                     RVFQEVSSFQGPLDATVVVNLQSPTLEEKNEFPEDLRTELMQTLGSYGTIVLVRINQG
                     QMLVTFADSHSALSVLDVDGMKVKGRAVKIRPKTKDWLKGLREEIIRKRDSMAPVSPT
                     ANSCLLEENFDFTSLDYESEGDILEDDEDYLVDEFNQPGVSDSELGGDDLSDVPGPTA
                     LAPPSKSPALTKKKQHPTYKDDADLVELKRELEAVGEFRHRSPSRSLSVPNRPRPPQP
                     PQRPPPPTGLMVKKSASDASISSGTHGQYSILQTARLLPGAPQQPPKARTGISKPYNV
                     KQIKTTNAQEAEAAIRCLLEARGGASEEALSAVAPRDLEASSEPEPTPGAAKPETPQA
                     PPLLPRRPPPRVPAIKKPTLRRTGKPLSPEEQFEQQTVHFTIGPPETSVEAPPVVTAP
                     RVPPVPKPRTFQPGKAAERPSHRKPASDEAPPGAGASVPPPLEAPPLVPKVPPRRKKS
                     APAAFHLQVLQSNSQLLQGLTYNSSDSPSGHPPAAGTVFPQGDFLSTSSATSPDSDGT
                     KAMKPEAAPLLGDYQDPFWNLLHHPKLLNNTWLSKSSDPLDSGTRSPKRDPIDPVSAG
                     ASAAKAELPPDHGHKTLGHWVTISDQEKRTALQVFDPLAKT"
BASE COUNT          772 a          870 c          789 g          614 t
ORIGIN      
        1 atcagaaagg gggcgagctt aggggcggca ttcctcttgg ggtgtgggtg tgggtgtttg
       61 gatgctggag gaactcatct tttccccagc ttgtggttgg cctcatctta ccacctgggc
      121 ctacccatgg cttttgaatt tccaccagcc tttcggcgag ctggcagcag gcgttgaact
      181 gacctcccca ctgagcccct gggtcccggg aagggcctgt gcctgccaag agcaccacgg
      241 gtacacccct gcagcacctg gagactaaga ctatgctgcc cataatcctc ttctctgact
      301 ttcagaagat gtttaggtcc ctgtccctct gcttgtgtta tttgggcagc ttggcagtgt
      361 cctaggttag caggtgaagg gacgtagcca tcgacacagt gaagacgggc atggggggca
      421 aggcggggaa caagggcgcc gtcggcatcc gcttccagtt ccacagcacc agcttctgct
      481 tcatatgtag tcacctgacg gccgggcagt cccaggtgaa ggagcggaat gaagactaca
      541 aggagatcac ccagaaactc tgcttcccaa tggggagaaa tgttttttct catgattatg
      601 tattttggtg tggcgatttc aactaccgca ttgatcttac ttatgaagaa gtcttctatt
      661 ttgttaaacg ccaagactgg aagaaacttc tggaatttga tcaactacag ctacagaaat
      721 caagtggaaa aatttttaag gactttcacg aaggagccat taactttgga cccacctaca
      781 agtatgacgt cggctcagcc gcctacgata caagcgacaa atgccgcacc cccgcctgga
      841 cagacagggt gctgtggtgg aggaagaaac atccctttga taaaacagct ggagaactca
      901 accttctaga cagtgatcta gatgttgaca ccaaagtcag acacacctgg tctcctggtg
      961 ccctgcagta ttatggtcgt gcggagctac aagcttctga tcacagacct gtgctggcga
     1021 tcgtggaggt ggaagttcag gaagtcgatg tgggtgctcg ggagagggtt ttccaggaag
     1081 tgtcctcctt ccagggcccc ctggatgcca ctgttgtagt aaaccttcaa tcaccgacct
     1141 tagaagagaa aaacgagttt ccagaggacc tgcgtactga gctcatgcag accttgggga
     1201 gttatgggac aattgttctt gtcaggatca accaagggca gatgctggta acttttgcag
     1261 acagtcactc ggctctcagt gtcctggacg tggacggtat gaaggtgaaa ggcagagcag
     1321 tgaagattag accgaagacc aaggactggc tgaaaggttt gcgagaggag atcattcgga
     1381 aacgagacag catggccccc gtgtctccca ctgccaactc ctgtttgctg gaggaaaact
     1441 ttgacttcac aagtttggac tatgagtcag aaggggatat tcttgaagac gatgaagact
     1501 acttggtgga tgaattcaat cagcctgggg tctcggacag tgaactcggg ggagacgacc
     1561 tctctgatgt ccccggcccc acagcactgg ctcctcccag caagtcacct gctctcacca
     1621 aaaagaagca gcatccaacg tacaaagatg acgcggacct ggtggagctc aagcgggagc
     1681 tggaagccgt cggggagttc cgccaccgtt ctccgagcag gtctctgtcg gtccccaacc
     1741 gacctcggcc acctcaaccc ccgcagagac ccccccctcc aaccggttta atggtgaaaa
     1801 agtcggcttc agatgcgtcc atctcctccg gcacccatgg gcagtattca attttgcaga
     1861 cggcaagact tctaccagga gcacctcagc aacctcccaa ggctcggact ggaataagta
     1921 aaccttataa tgtcaagcag atcaaaacca ccaatgccca ggaggcagaa gcagcaatcc
     1981 ggtgtctcct ggaagccaga ggaggtgcct ccgaagaagc cctaagtgcc gtggccccaa
     2041 gggaccttga agcatcctct gaaccagagc ccacaccggg ggcagccaaa ccagagaccc
     2101 cacaggcgcc cccactcctt ccccgtcggc ccccacccag agttcctgcc atcaagaagc
     2161 caaccttgag aaggacagga aagcccctgt caccggaaga acagtttgag caacagactg
     2221 tccattttac aatcgggccc ccggagacaa gcgttgaggc ccctcctgtc gtgacagccc
     2281 ctcgagtccc tcctgttccc aaaccaagaa catttcagcc tgggaaagct gcagagaggc
     2341 caagccacag gaagccagca tcagacgaag cccctcctgg ggcaggagcc tctgtgccac
     2401 cacctctgga ggcgccgcct cttgtgccca aggtaccccc gaggaggaag aagtcagccc
     2461 ccgcagcctt ccacctgcag gtcctgcaga gcaacagcca gcttctccag ggcctcactt
     2521 acaatagcag tgacagcccc tctgggcacc cacctgccgc gggcaccgtc ttcccacaag
     2581 gggactttct cagcacttca tctgctacaa gccccgacag cgatggcacc aaagcgatga
     2641 agccagaggc agccccactt cttggtgatt atcaggaccc cttctggaac cttcttcacc
     2701 accctaaact gttgaataac acttggcttt ctaagagctc agaccctttg gactcaggaa
     2761 ccaggagccc caaaagagat cccatagacc cagtgtcagc tggcgcttca gctgccaagg
     2821 cagagctgcc accagatcat ggacacaaaa ccttaggtca ctgggtgaca atcagtgacc
     2881 aagaaaagag gacagcactg caggtgtttg acccactggc aaaaacatga ctgagcagct
     2941 ttgaaggctg cagtcctata gaatgcatac cttcctccct ctaggcatcc ctccaccaga
     3001 agagacatct atttaaaggc acactggcca aaaaaaaaaa aaaaa
//