LOCUS BC043226 1683 bp mRNA linear HUM 17-JUL-2006
DEFINITION Homo sapiens eukaryotic translation initiation factor 4E, mRNA
(cDNA clone MGC:44309 IMAGE:5295521), complete cds.
ACCESSION BC043226
VERSION BC043226.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1683)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1683)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (09-JAN-2003) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Miklos Palkovits, M.D., Ph.D.
cDNA Library Preparation: Michael J. Brownstein (NHGRI) & Shiraki
Toshiyuki and Piero Carninci (RIKEN)
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 76 Row: i Column: 16
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 54873625.
FEATURES Location/Qualifiers
source 1..1683
/db_xref="H-InvDB:HIT000097548"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:44309 IMAGE:5295521"
/tissue_type="Testis"
/clone_lib="NIH_MGC_97"
/lab_host="DH10B"
/note="Vector: pBluescriptR"
gene 1..1683
/gene="EIF4E"
/gene_synonym="CBP"
/db_xref="GeneID:1977"
/db_xref="HGNC:HGNC:3287"
/db_xref="MIM:133440"
CDS 863..1516
/gene="EIF4E"
/gene_synonym="CBP"
/codon_start=1
/product="eukaryotic translation initiation factor 4E"
/protein_id="AAH43226.1"
/db_xref="GeneID:1977"
/db_xref="HGNC:HGNC:3287"
/db_xref="MIM:133440"
/translation="MATVEPETTPTPNPPTTEEEKTESNQEVANPEHYIKHPLQNRWA
LWFFKNDKSKTWQANLRLISKFDTVEDFWALYNHIQLSSNLMPGCDYSLFKDGIEPMW
EDEKNKRGGRWLITLNKQQRRSDLDRFWLETLLCLIGESFDDYSDDVCGAVVNVRAKG
DKIAIWTTECENREAVTHIGRVYKERLGLPPKIVIGYQSHADTATKSGSTTKNRFVV"
BASE COUNT 500 a 387 c 409 g 387 t
ORIGIN
1 agcggagcgg ggcccggagt ggcttccctg gctggcatct ggacttaggc tatttccgtg
61 cacgtaaaag cggaatattg gaacggttgc acagaacttc caaataattt ttaccgccac
121 gcaagattta gccctgaggt cttaatctca ggatttggga cagtaaaagc tgtcgtccct
181 ccccctcgtc cagccggtgg caagcgggta ctgcgggcgg ttccgtccgt cccctttcgc
241 agaaatggca acgaatgacc accagcatta gctgagccag gggacgtggg agggttgatt
301 gcctaaacga ctctgcatcg ccgcctcttt ttgaaactaa gagaaaatgg tgggagatca
361 aaagaaaact aaataaacac acaggcaact tgtcctggga cctcaactaa gcaaatgaag
421 ccttattgtg tgtgctgagc ctgcagttcc caaccttccg gggaagatgg gaggacaggg
481 cgacaaaggg cacagtaggc ttgcctggca gtaagtgtga ccgcagctat ccaggcggaa
541 gagcagagga ctgaaaccac cctccagcaa gcgagtgtcc gccgcgttga gaaccgcgca
601 ccctacccat cggccacgtg accagtcctt tttaaaaaaa atttctttac cttaaaaaaa
661 aaaaaaaaaa aaaaaggtgg gggagagact ccacttccca gaagcctctc gttactcacg
721 cagccgcagt cttgcgcagg tgccgccagg gccaaacgga catatccgtc acgtggccag
781 aagccggcca atccggtttg aatctcattt ttttcctctt accccccctt ctggagcggt
841 tgtgcgatca gatcgatcta agatggcgac tgtcgaaccg gaaaccaccc ctactcctaa
901 tcccccgact acagaagagg agaaaacgga atctaatcag gaggttgcta acccagaaca
961 ctatattaaa catcccctac agaacagatg ggcactctgg ttttttaaaa atgataaaag
1021 caaaacttgg caagcaaacc tgcggctgat ctccaagttt gatactgttg aagacttttg
1081 ggctctgtac aaccatatcc agttgtctag taatttaatg cctggctgtg actactcact
1141 ttttaaggat ggtattgagc ctatgtggga agatgagaaa aacaaacggg gaggacgatg
1201 gctaattaca ttgaacaaac agcagagacg aagtgacctc gatcgctttt ggctagagac
1261 acttctgtgc cttattggag aatcttttga tgactacagt gatgatgtat gtggcgctgt
1321 tgttaatgtt agagctaaag gtgataagat agcaatatgg actactgaat gtgaaaacag
1381 agaagctgtt acacatatag ggagggtata caaggaaagg ttaggacttc ctccaaagat
1441 agtgattggt tatcagtccc acgcagacac agctactaag agcggctcca ccactaaaaa
1501 taggtttgtt gtttaagaag acaccttctg agtattctca taggagactg cgtcaagcaa
1561 tcgagatttg ggagctgaac caaagcctct tcaaaaagca gagtggactg catttaaatt
1621 tgatttccat cttaatgtta ctcagatata agagaagtct cattcgcaaa aaaaaaaaaa
1681 aaa
//