LOCUS BC043193 4591 bp mRNA linear HUM 17-JUL-2006
DEFINITION Homo sapiens chromosome 4 open reading frame 18, mRNA (cDNA clone
MGC:44228 IMAGE:5288748), complete cds.
ACCESSION BC043193
VERSION BC043193.2
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 4591)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 4591)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (09-JAN-2003) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Aug 25, 2003 this sequence version replaced BC043193.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Miklos Palkovits, M.D., Ph.D.
cDNA Library Preparation: Michael J. Brownstein (NHGRI) & Shiraki
Toshiyuki and Piero Carninci (RIKEN)
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 76 Row: f Column: 22
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 32526910.
FEATURES Location/Qualifiers
source 1..4591
/db_xref="H-InvDB:HIT000052783"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:44228 IMAGE:5288748"
/tissue_type="Brain, hypothalamus"
/clone_lib="NIH_MGC_96"
/lab_host="DH10B"
/note="Vector: pBluescriptR"
gene 1..4591
/gene="C4orf18"
/gene_synonym="AD021"
/gene_synonym="AD036"
/gene_synonym="DKFZp434L142"
/gene_synonym="FLJ38155"
/db_xref="GeneID:51313"
/db_xref="HGNC:HGNC:25312"
CDS 408..1991
/gene="C4orf18"
/gene_synonym="AD021"
/gene_synonym="AD036"
/gene_synonym="DKFZp434L142"
/gene_synonym="FLJ38155"
/codon_start=1
/product="chromosome 4 open reading frame 18"
/protein_id="AAH43193.1"
/db_xref="GeneID:51313"
/db_xref="HGNC:HGNC:25312"
/translation="MTCPDKPGQLINWFICSLCVPRVRKLWSSRRPRTRRNLLLGTAC
AIYLGFLVSQVGRASLQHGQAAEKGPHRSRDTAEPSFPEIPLDGTLAPPESQGNGSTL
QPNVVYITLRSKRSKPANIRGTVKPKRRKKHAVASAAPGQEALVGPSLQPQEAAREAD
AVAPGYAQGANLVKIGERPWRLVRGPGVRAGGPDFLQPSSRESNIRIYSESAPSWLSK
DDIRRMRLLADSAVAGLRPVSSRSGARLLVLEGGAPGAVLRCGPSPCGLLKQPLDMSE
VFAFHLDRILGLNRTLPSVSRKAEFIQAAAAACLSMRLAFFIFPAWEDMRVPGKCCIG
HARLTWGTYQQLLKQKCWQNGRVPKPESGCTEIHHHEWSKMALFDFLLQIYNRLDTNC
CGFRPRKEDACVQNGLRPKCDDQGSAALAHIIQRKHDPRHLVFIDNKSFFDRSEDNLN
FKLLEGIKEFPASAVSVLKSQHLRQKLLQSLFLDKVYWESQGGRQGIEKLIDVIEHRA
KILITYINAHGVKVLPMNE"
BASE COUNT 1337 a 942 c 907 g 1405 t
ORIGIN
1 gtgaactgtt gcaccgtgca attgcacact ataaatgtct ttccttatct gtgtgtactc
61 ttatctcact gttctatttt ttctcctcat ttatattaac tctttcttac ctttttttct
121 gaacttctag gccttctctt tccagaactg gtggaagaca aatgaaacgg ccaagatggt
181 aagaaacaag ccgcatttct ccttggggag actgataatt taaaaggttt gttgtgtcag
241 aaacattccc agcttcatca ccaacccttt ccttccacct ctgcccactg gagaccactt
301 acatcccgaa gcggacgcgg cagctgaagt caggaaacca tgcatcacat tagcaggagc
361 caactgcaga ctttaaactc cgttcaacat gtggatgcgg cagagaaatg acctgtccag
421 acaagccggg gcagctcata aactggttca tctgctccct gtgcgtcccg cgggtgcgta
481 agctctggag cagccggcgt ccaaggaccc ggagaaacct tctgctgggc actgcgtgtg
541 ccatctactt gggcttcctg gtgagccagg tggggagggc ctctctccag catggacagg
601 cggctgagaa ggggccacat cgcagccgcg acaccgccga gccatccttc cctgagatac
661 ccctggatgg taccctggcc cctccagagt cccagggcaa tgggtccact ctgcagccca
721 atgtggtgta cattacccta cgctccaagc gcagcaagcc ggccaatatc cgtggcaccg
781 tgaagcccaa gcgcaggaaa aagcatgcag tggcatcggc tgccccaggg caggaggctt
841 tggtcggacc atcccttcag ccgcaggaag cggcaaggga agctgatgct gtagcacctg
901 ggtacgctca gggagcaaac ctggttaaga ttggagagcg accctggagg ttggtgcggg
961 gtccgggagt gcgagccggg ggcccagact tcctgcagcc cagctccagg gagagcaaca
1021 ttaggatcta cagcgagagc gccccctcct ggctgagcaa agatgacatc cgaagaatgc
1081 gactcttggc ggacagcgca gtggcagggc tccggcctgt gtcctctagg agcggagccc
1141 gtttgctggt gctggagggg ggcgcacctg gcgctgtgct ccgctgtggc cctagcccct
1201 gtgggcttct caagcagccc ttggacatga gtgaggtgtt tgccttccac ctagacagga
1261 tcctggggct caacaggacc ctgccgtctg tgagcaggaa agcagagttc atccaagcag
1321 cagcagcagc gtgtctttcc atgcgcttgg cattctttat tttcccagcc tgggaggata
1381 tgagagttcc agggaaatgc tgtattggac atgcaaggct cacctgggga acttatcagc
1441 agttgctgaa acagaaatgc tggcagaatg gccgagtacc caagcctgaa tcaggttgta
1501 ctgaaataca tcatcatgag tggtccaaga tggcactctt tgattttttg ttacagattt
1561 ataatcgctt agatacaaat tgctgtggat tcagacctcg caaggaagat gcctgtgtac
1621 agaatggatt gaggccaaaa tgtgatgacc aaggttctgc ggctctagca cacattatcc
1681 agcgaaagca tgacccaagg catttggttt ttatagacaa caagagtttc tttgacagga
1741 gtgaagataa cttaaacttc aaattgttag aaggcatcaa agagtttcca gcttctgcag
1801 tttctgtttt gaagagccag cacttacggc agaaacttct tcagtctctg tttcttgata
1861 aagtgtattg ggaaagtcaa ggaggtagac aaggaattga aaagcttatc gatgtaatag
1921 aacacagagc caaaattctt atcacctata tcaatgcaca cggggtcaaa gtattaccta
1981 tgaatgaatg acaaaagaat cttctggcta gggtgttaga tatatttatg catttttggt
2041 tttgttttta aatcaagcac atcaacctca agcccgttta gcaatgaggc agtgtagatg
2101 aatacgtaaa ataaatgact ttaaccaagt agctataatg ggacttagca ctgtatgcat
2161 acttaaaaag gttttgaaaa acaaactact tgagaaatat ttgtttatat ttttctctaa
2221 catcatgcta tgtgtcagtc tgaacatctg acaacagaaa tttcagttat tattctagct
2281 aagttttgaa aacatttgtc atgctgttta atagaaaact gcaaaccaga gatactgact
2341 ccattaataa accatatttt gtgccgtttt gactgttctg accaaatact aatgggaaca
2401 attcttgacg tttttctgtt gctgattgtt aacatagagc agtctctaca ctaccctgag
2461 gcaactctac attggaacac tgaggcttac agcctgcaag agcatcagag ctgaccatac
2521 atttaaacag aaatgctggt ttatttgcaa aatcaccagt atattttcta ttgtgtctat
2581 aaaaaatcag tcatttaagt acaagaatca tattttccat tcctttttag aaatttattt
2641 tgttgtccct atggaaatca ttcacatctg acaatttata tgttaaagag ttttactctc
2701 tctattttgg tccaatttgt atctagtggc tgagaaatta aataattcta aagtatgaag
2761 ttacctatct gaaaatgtac ttacagagta tcattttaaa atggatgtct ctttaaaaat
2821 tttgttactt ttaccaacaa tgtaatataa tttatgtata ttttattaat aatagtgaat
2881 tccttaaaat ttgttctatg tacttatatt taatttgatt taatggttac tgcccagata
2941 ttgagaaatg gttcaaatat tgagtgtgtt tcaatatatt atctggctta tttcaacatg
3001 agtaatatga gcaaaataag ttaaaacctg cgtctgatca attttcctca tgactagaac
3061 taaaacagta aatttggaca atattaagcc tcaaataatc atctccaaac tcattctaac
3121 actttttaaa tcagattgga agacatggac aaatcaggtt catgtgttgc atctttatgt
3181 cctttgccaa tatccaagat catcacatat ggtagatatt cacatggagt ttcaaattca
3241 gaatagatta ccattacctt cctgccctta cacatcctac tccttattta aaagttctat
3301 ttgtgacttt tcatttcctg aaagtttaaa aatacaattt gagaatgttt ataatacatt
3361 ctctcctgtc ttttcacggt tacgtctgtt atttctgaaa tacaccacat tttctttgtt
3421 ctggtcaagg ttaactcaat atctgtgtga aagagaacta ctaacaacgt tacaatagag
3481 gctagatttg aaaaaaaaaa tctatagatc taattgatac aattgtagaa caaaatgtca
3541 aaataatgtt ttaagtataa gagaagatgg accaaggaga gagagatcat ttgaaaatct
3601 aattgtagct tttctaggct cacattcatg tactactttt agcaccctta tgggctgtgc
3661 tcgccccctg gacagttgag ctttggatta tcttcctctt caattttccc tctattgacc
3721 cgagtgtctc cctctgcttc tacagattta tagtactcct tggctctttt gagtctccac
3781 ttttactcac tgtctctggg atttttaaga tccttttctt ctcttataaa tcatcctctt
3841 aatgaaaatt agcctaacaa aagtttggag actggaatcc tactttgagc cactgacttg
3901 aaataactct tttggcaagt tgcctgacat cctgtcttac caaggtggca tatttgcatt
3961 tttactgctt aaaacatttt ttttttttac catctttatc caaatttatc atattgatgg
4021 taggactaac aggcttttta gaagctggct ttaactttga gtctcaagct acaatgctgt
4081 tgggcagcct ggtcttccca cgtgagggtt taactttgtt tatttgcctc cagttattcc
4141 taaatgctta ttaaatgaaa ggcccaggaa catgtttatt ttagtcacct ttgcttttta
4201 acaattttgt tttgtaatca atgagtaatt catgatgaat tatttttgac taatggatag
4261 ccgaaggcca agcttttaat tctaataggt aatgttcttc ttttgtctta ttgaaacaat
4321 gagaatactc tgtgcatttc aaatgcactc cgattatgct gtggttttat tcacataagc
4381 acaatatgtg ttttatttat aacttcataa caaacttata atataataat ttaccttagc
4441 agacatgcaa aagcttattc ttgtgtgact tactttcttt aagctaataa tataaaaata
4501 aatatgtatc ttaaaaatct ataataaaac attagaaatt aaaaaaaaaa aaaaaaaaaa
4561 aaaaaaaaaa aaaagaaaaa aaaaaaaaaa a
//