LOCUS BC043154 1369 bp mRNA linear HUM 09-JUN-2008
DEFINITION Homo sapiens RGD motif, leucine rich repeats, tropomodulin domain
and proline-rich containing, mRNA (cDNA clone IMAGE:5274520),
partial cds.
ACCESSION BC043154
VERSION BC043154.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1369)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1369)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (09-JAN-2003) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Miklos Palkovits, M.D., Ph.D.
cDNA Library Preparation: Michael J. Brownstein (NHGRI) & Shiraki
Toshiyuki and Piero Carninci (RIKEN)
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 75 Row: g Column: 1.
FEATURES Location/Qualifiers
source 1..1369
/db_xref="H-InvDB:HIT000097485"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:5274520"
/tissue_type="Brain, hippocampus"
/clone_lib="NIH_MGC_95"
/lab_host="DH10B"
/note="Vector: pBluescriptR"
gene <1..1369
/gene="RLTPR"
/gene_synonym="LRRC16C"
/db_xref="GeneID:146206"
/db_xref="HGNC:HGNC:27089"
/db_xref="MIM:610859"
CDS <1..1125
/gene="RLTPR"
/gene_synonym="LRRC16C"
/codon_start=1
/product="RLTPR protein"
/protein_id="AAH43154.1"
/db_xref="GeneID:146206"
/db_xref="HGNC:HGNC:27089"
/db_xref="MIM:610859"
/translation="SGGEDAEPQAGPSARGSPSPAAPGPPAGPLPRMDLPLAGQPLRH
PTRARPRPRRQHHHRPPPGGPQVPPALPQEGNGLSARVDEGVEEFFSKRLIQQDRLWA
PEEDPATEGGATPVPRTLRKKLGTLFAFKKPRSTRGPRTDLETSPGAAPRTRKTTFGD
LLRPPTRPSRGEELGGAEGDTSSPDPAGRSRPRYTRDSKAYSMILLPAEEEATLGARP
DKRRPLERGETELAPSFEQRVQVMLQRIGVSRGSGGAEGKRKQSKDGEIKKAGSDGDI
MDSSTEAPPISIKSRTHSVSADPSCRPGPGSQGPESATWKTLGQQLNAELRSRGWGQQ
DGPGPPSPGQSPSPCRTSPPQTAWASQRTLAWAPEMKNGP"
BASE COUNT 294 a 479 c 413 g 183 t
ORIGIN
1 agcgggggag aagatgcaga gccgcaggcg gggccgtccg cgcgcggctc tccgagccct
61 gccgcccctg ggcccccggc cggcccgctg ccccgcatgg acctgccact ggcggggcag
121 cccctgcgcc atccgacccg ggcccggccg cggccgcgcc gccagcacca ccaccgcccg
181 ccgccggggg gcccccaggt acccccagcc ttgccgcagg aagggaatgg gctcagtgcc
241 cgcgtggacg agggcgtgga ggaattcttc tccaaaaggc tgatccagca ggatcgcctc
301 tgggcccccg aggaggaccc ggccactgag gggggcgcca ctcctgtccc ccgtacactg
361 cgaaagaagc tgggcaccct ctttgccttc aagaagcctc gttcaacgcg gggtccacgg
421 actgatctag agaccagccc tggggcagct ccccgaaccc gaaaaactac atttggcgac
481 ctactgcggc cgccaacccg tcccagccgt ggtgaggagc ttggtggggc tgagggggac
541 accagcagcc ctgaccctgc cggcaggagc cgacctcgct acacaagaga tagcaaggcc
601 tactcgatga tactgctgcc tgccgaggag gaggcaacgc tgggtgccag acccgacaag
661 cggcggcccc tggagcgggg agaaacagaa ctggctccat cctttgaaca gcgggtacaa
721 gtaatgctgc agaggatagg cgtcagccga ggcagcgggg gtgccgaagg caagaggaag
781 caaagcaaag atggcgagat caagaaagct ggctcagatg gtgacattat ggacagttcc
841 acggaggccc ctcccatctc gatcaagtcc cgcacccact ctgtgtctgc tgacccttcc
901 tgcagacctg gcccagggag ccaggggcct gagtctgcca cctggaagac actggggcag
961 cagttgaatg cggagctcag gagccgtggt tggggccaac aggatggtcc aggccctccc
1021 tcccctggtc aaagcccaag tccctgcaga accagccctc cccagacagc ctgggcctcc
1081 cagaggaccc ttgcttgggc cccagaaatg aagaacggcc cctgaggctg cagcgctccc
1141 ccgtcctcaa acgcaggcca aaactcgagg cacctccatc cccaagccta ggatctggcc
1201 ttggaaccga gcctctgccc ccacagccca cagagccctc cagccctgag cggagcccac
1261 cctccccagc cacagaccaa agaggcggcg gccccaatcc ctgatcctct cctctcctgc
1321 ggcatgagat tattttatta aaaaactcaa aggaaaaaaa aaaaaaaaa
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