LOCUS BC042906 3813 bp mRNA linear HUM 28-SEP-2004
DEFINITION Homo sapiens ALS2 C-terminal like, mRNA (cDNA clone IMAGE:5445552),
partial cds.
ACCESSION BC042906
VERSION BC042906.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 3813)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 3813)
AUTHORS Director MGC Project.
TITLE Direct Submission
JOURNAL Submitted (06-JAN-2003) National Institutes of Health, Mammalian
Gene Collection (MGC), Cancer Genomics Office, National Cancer
Institute, 31 Center Drive, Room 11A03, Bethesda, MD 20892-2590,
USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: DCTD/DTP
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 44 Row: j Column: 24.
FEATURES Location/Qualifiers
source 1..3813
/db_xref="H-InvDB:HIT000097409"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:5445552"
/tissue_type="Prostate, carcinoma"
/clone_lib="NIH_MGC_40"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene <1..3813
/gene="ALS2CL"
/gene_synonym="DKFZp686I0110"
/gene_synonym="FLJ36525"
/db_xref="GeneID:259173"
CDS <1..1988
/gene="ALS2CL"
/gene_synonym="DKFZp686I0110"
/gene_synonym="FLJ36525"
/codon_start=3
/product="ALS2CL protein"
/protein_id="AAH42906.1"
/db_xref="GeneID:259173"
/translation="EFSFCAKDSQGQAVWQWKVTWAVHQALHGKKDFPVLGAGLEPSQ
PPDCRCAEYTFQAEGRLCQATYEGEWCRGRPHGKGTLKWPDGRNHVGNFCQGLEHGFG
IRLLPQASEDKFDCYKCHWREGSMCGYGICEYSTDEVYKGYFQEGLRHGFGVLESGPQ
APQPFRYTGHWERGQRSGYGIEEDGDRGERYIGMWQAGQRHGPGVMVTQAGVCYQGTF
QADKTVGPGILLSEDDSLYEGTFTRDLTLMGKGKVTFPNGFTLEGSFGSGAGRGLHTQ
GVLDTAALPPDPSSTCKRQLGVGAFPVESRWQGVYSPFRDFVCAGCPRDLQEALLGFD
VQSSRELRRSQDYLSCERTHPEDSVGSMEDILEELLQHREPKALQLYLRKALSNSLHP
LGKLLRTLMLTFQATYAGVGANKHLQELAQEEVKQHAQELWAAYRGLLRVALERKGQA
LEEDEDTETRDLQVHGLVLPLMLPSFYSELFTLYLLLHEREDSFYSQGIANLSLFPDT
QLLEFLDVQKHLWPLKDLTLTSNQRYSLVRDKCFLSATECLQKIMTTVDPREKLEVLE
RTYGEIEGTVSRVLGREYKLPMDDLLPLLIYVVSRARIQHLGAEIHLIRDMMDPNHTG
GLYDFLLTALESCYEHIQKEDMRLHRLPGHWHSRELW"
BASE COUNT 809 a 1065 c 1194 g 745 t
ORIGIN
1 aagagttctc cttttgtgcc aaggactccc agggccaggc agtctggcag tggaaggtga
61 cctgggctgt tcaccaggcc ctgcatggga agaaggactt ccccgtgctg ggggctggcc
121 tggagccctc ccagcctccc gactgccgct gcgcagaata taccttccag gcagagggcc
181 ggctctgcca ggccacctac gagggcgagt ggtgcagggg ccggccccac ggcaagggaa
241 ccctgaaatg gccggatggg cggaatcatg tggggaattt ctgccagggc ctggagcatg
301 gcttcggcat ccgcctgctg ccccaggcct ctgaggacaa gttcgactgt tacaagtgtc
361 actggcgaga aggcagcatg tgtggctacg gcatctgtga gtacagcacc gacgaggtgt
421 acaagggcta cttccaggag ggcctgcggc acggatttgg ggtccttgag agtggtccgc
481 aggcccccca gcccttcagg tacacgggcc actgggagag gggccagagg agcggctatg
541 gcattgagga ggatggtgac agaggtgagc gctacattgg catgtggcag gctggtcagc
601 gccacggccc aggggtcatg gtcacccagg caggtgtctg ctaccagggc accttccagg
661 cggacaagac ggtgggcccg ggcatcctcc tctctgaaga cgactccctg tatgagggca
721 ccttcaccag ggacctgacc ctcatgggga agggcaaggt caccttcccc aatggcttca
781 ccctggaggg ctcgttcggc agtggggcag ggagaggact gcacacacag ggtgtgctgg
841 acacggctgc cctcccacca gacccgagca gtacctgcaa gaggcagctg ggcgtgggtg
901 ccttccccgt ggaaagccgc tggcagggag tctacagccc cttccgggac tttgtgtgtg
961 ctggctgccc cagggacctg caggaggccc tgctgggctt cgacgtgcag agctccaggg
1021 agctgcgtag gtctcaggat tacctgtcct gcgagaggac ccaccctgag gacagtgtgg
1081 gcagtatgga agacatcctg gaggagctgc tgcagcaccg ggagcccaag gccctgcagc
1141 tgtacctcag gaaggctctg agcaactcac tgcaccccct gggaaagctg ctccggacac
1201 tgatgctgac cttccaggct acctacgcag gtgtcggggc caacaagcac ctgcaggagc
1261 tggcccagga ggaggtgaag cagcatgccc aggaactctg ggctgcctac aggggtctgc
1321 tgcgagttgc cttagagcgc aagggccagg ccctggagga ggatgaagac acagagacaa
1381 gggacctcca ggtgcatgga ttggtgctgc ccctcatgct gcccagcttc tactcagagc
1441 tcttcacgct ctacctgctg cttcatgagc gggaggacag cttctacagc cagggcattg
1501 ccaacttgag cctctttcct gatacccaac tgctcgagtt cctggatgtg cagaagcact
1561 tgtggcccct caaggacctc acgctgacga gcaatcagag gtactccctg gtcagggaca
1621 agtgtttcct gtcagccacc gagtgcctgc agaagatcat gaccacggtg gacccacggg
1681 agaagctgga ggtgctggag aggacatacg gggaaattga gggcacggtg tcgagggtat
1741 tgggccggga gtacaagctg cccatggacg acctgctgcc acttctcatc tacgtggtgt
1801 cgcgcgcccg aattcagcac ctgggagccg agatccacct gatccgtgac atgatggacc
1861 ccaaccacac aggaggcctg tatgacttcc tgctcacagc cctggagtcc tgttacgagc
1921 acatccagaa agaagacatg aggctgcacc gcttacctgg ccactggcac tccagggagc
1981 tctggtagcc tggcctttcc tggacagact gaagagctga gcagggcact gccagcctgt
2041 ccctcattac ccaaggcaag gggcaggaca ggccctcaga agcagctctt ggaggagatg
2101 agcattttgt tttgcacagg aaaatgctgc tgctgccctg actgggatga gggtgagggg
2161 tgacgggtgt ggccctggat gtggtggttt tcccttggcc actagcccat cttcaatgac
2221 cccttaatct gcagcagctc acaggctggg ggtgaggagt ccctggcttc tcttagcctg
2281 agcctttctc ccaagttcca gagcctctcc gggcctcagt gctgccatct gtacaatggt
2341 ggagtgagta cgctgtaaag gaccttccat tcattttgct gaattccaga gtccttttgg
2401 aaaactgact ttagtctgct gggctgtatt gacctctggc aggctcgaag cctcactggg
2461 tatgcagtca acaggatggg cctggagatc cgtgaactgc aggccacgta cccatgacgt
2521 aaacggcggc actggagcaa gctggggcgg ggggtgggta aaccctcact gccagcaggc
2581 cccaagtggc ttgtaaatca ttctcctgtg acgtctgtgg gcctgcgtgg ggacaacagg
2641 ggcacatgac atctgcctgg gccctgacca ataaaccctc agacccagga cccaggaccc
2701 tgctgtagtt ggggagcagg agtacctttg ggaggggagg actttattta aacagtggtt
2761 ctagtgtggg accaagagag gcaggagctg ggtcttgggg cagctttatt cctgttgggc
2821 ctcagtttct cttccccaca cagtttatct tccgtcacat tgtgccgggt gacgtgcacg
2881 gtctccctct gccctagcag gagatgcatg atgacaggca gtgtgatgtg ttctgaaagt
2941 gtccagggca aagcataggg agagggtgga tttgtgcagg gtgcagctct ggagaagaag
3001 ctggatcact cttggtccca ttccctaggc cctgagcaag tcaggctcct ggctctgggt
3061 gtggctcccc caaacgaagt actgacttca gcctgtgagg ggagggttga gggaggctct
3121 ggaaagccca gccacacctg agtccctggc agtagccttg gggcagaggg cacccgcaga
3181 gtcccagaga tgatgtgggc agtgggcaga gagagccttg gcgcctctgt ttgccaccac
3241 ttccccagga aggagggaca gcatttctct ggctggttcc actaaatgtg ccagcccaaa
3301 tgcagggcat gggctctggt tctgccagga gcctgtgaca cccccaggaa gggggtggaa
3361 ctgaggaaga gcgaggatat gcaggcactc atgcttaccg ggactggggc agctcactag
3421 gattctatcc tttccaatcg gcatcagcca gctcttgtcc cctgataagt gaggacagcc
3481 tgaccctggc ctcaaatgca gccatccctg agttcatgcg atgctgacgg gaccccagca
3541 cacttccctg cctcctttga gatctgcgag cccttgctgc agttcagatt caacaaggcc
3601 ctctgcccac cctctcacta ggcctcaccc aacaccagtg gaactggagc ctctggctgg
3661 gcacagtggc tcactttggg aggctgaggc aggaaggctg ctggaaactg agagttcaag
3721 accagcctgg gcaacatagt gagaccctgt ctctacaaat ataaaataaa ataattagct
3781 gggaaaaaaa aaaaaaaaaa aaaaaaaaaa aaa
//