LOCUS BC042887 1748 bp mRNA linear HUM 28-JUL-2005 DEFINITION Homo sapiens protocadherin alpha 6, mRNA (cDNA clone IMAGE:4822690). ACCESSION BC042887 VERSION BC042887.1 KEYWORDS . SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 1748) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 1748) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (06-JAN-2003) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: Miklos Palkovits, M.D., Ph.D. cDNA Library Preparation: Michael J. Brownstein (NHGRI) & Shiraki Toshiyuki and Piero Carninci (RIKEN) cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Baylor College of Medicine Human Genome Sequencing Center Center code: BCM-HGSC Web site: http://www.hgsc.bcm.tmc.edu/cdna/ Contact: amg@bcm.tmc.edu Gunaratne, P.H., Garcia, A.M., Lu, X., Hulyk, S.W., Loulseged, H., Kowis, C.R., Sneed, A.J., Martin, R.G., Muzny, D.M., Nanavati, A.N., Gibbs, R.A. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAK Plate: 71 Row: g Column: 5. FEATURES Location/Qualifiers source 1..1748 /db_xref="H-InvDB:HIT000097401" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="IMAGE:4822690" /tissue_type="Testis" /clone_lib="NIH_MGC_97" /lab_host="DH10B" /note="Vector: pBluescriptR" BASE COUNT 417 a 467 c 447 g 417 t ORIGIN 1 gggtaggaca ccagggcgtt ctcctgcgcg tccgcgtccc gcgcagacac cgtgaagatg 61 tggcagcccg gcgggttgtt ctccttcacg aacaccgtgt actcggactg cgcgaacgct 121 ggtgcgttgt cgttcacgtc ggccacctcc acagacaccc tggccgtggc ccacagtgaa 181 ggcgagcccc ggtcccgcgc ggtaaccacc agctcgtagg cggacacact ctcgcggtcc 241 agagctctgt ccagcaccaa cgagtagtaa ttcttgtagg tggacaccag cttgaagggg 301 acgtggggcg tcagggagca ggtaacctgc ccgttggcat ctgcgtctag gtcgatcaca 361 ctaatcaggg caataactgt ccccagttgt gcgtcctctt ttacaggaac cgagagcgtt 421 ttgatagtca actgtggagc attgtcattt acatccacaa cttccacaag aactgtacaa 481 tgaccagcca ggggtgggaa gcctttatcg acagcctcga ctgggatctt gtgtgctcta 541 ctttcttcaa aatccatatg tcctatcact gtgattgccc cacttaaggg gtccatgtgg 601 aacttggatt ttatatctgg agaaacatca ctggagaagg agtaaataat atccccattc 661 aagccttcgt ctaaatctga ggcattgggg tgaatcacca gcgttccgat agaaacgttt 721 tctggtaatt tcaccgtata cagggttctg tcgaacactg gggcattgtc attgttgtcc 781 agtaccgtga tgagtaattg aacggtgcca gtcagctcgg gtttgcctcc atcggtggcc 841 gtgagcaata aatgaagctc cggagtttct tctctgtcta aaagtttccg taatacaagt 901 ccaagaggtt ttacctgctg gttgctggtt ggcacgtcca ggaagaaata ctcattgggg 961 ctcagtctgt aagtgagcag ggcgttctcc ccgatatctg catcggacgc gccctctagt 1021 ggaaaccgag agtcaagcgg cctggattcc gcgatgaaca gattcttttg tgtcgctggg 1081 aacactggag ggttgtcgtt aatgtccttc acctccacgt ccacatggaa aacctgcagc 1141 ggcctgtcta cgatcacctc aggtggatgc tgcactccgc gctccgcccg cacagctcct 1201 cgcggtcgat ccgagaattc acaaacaaaa tgccattctg cagatttacc tccagaaggt 1261 ccccgcggcc tttggaatcc aactggaaca ggcgcggcac cagctccgcc agctccagcc 1321 ccaggtcctg cgcgatgcgg cccacgaagg tgccgtgttc ggcttcctcc gggacggagt 1381 agtggagctg gcctctcccc accacccaca ttgcgaggat cagaagcgag agcagtagag 1441 gctgaccctc tggatctcct cgacttgagt ataacatttc aaatactcag tcttcttcta 1501 attagtgaaa attgcctcca aattagaaga aatcatctga tttcgtcagt cccattctgc 1561 tgtgttcgcc atcgttcagc acagagagag tgaaaaagaa ttgagcctct ttcccatggg 1621 aaaagggctg tatttgtctg gattcagaga gaacatcgcg gcaaagagtg acatcacgtg 1681 gtccaaagtg taagtacata tttcatgaat aaaaatttca cagttattct acaaaaaaaa 1741 aaaaaaaa //