LOCUS BC042875 2557 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens solute carrier family 38, member 3, mRNA (cDNA clone
MGC:34416 IMAGE:5174617), complete cds.
ACCESSION BC042875
VERSION BC042875.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2557)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2557)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (02-JAN-2003) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Life Technologies, Inc.
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Baylor College of Medicine Human Genome
Sequencing Center
Center code: BCM-HGSC
Web site: http://www.hgsc.bcm.tmc.edu/cdna/
Contact: amg@bcm.tmc.edu
Gunaratne, P.H., Garcia, A.M., Lu, X., Hulyk, S.W., Loulseged, H.,
Kowis, C.R., Sneed, A.J., Martin, R.G., Muzny, D.M., Nanavati,
A.N., Gibbs, R.A.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 51 Row: k Column: 2
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 40795668.
FEATURES Location/Qualifiers
source 1..2557
/db_xref="H-InvDB:HIT000052749"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:34416 IMAGE:5174617"
/tissue_type="Brain, Lung, Testis, adult, pooled whole"
/clone_lib="NIH_MGC_115"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..2557
/gene="SLC38A3"
/gene_synonym="G17"
/gene_synonym="SN1"
/db_xref="GeneID:10991"
/db_xref="HGNC:HGNC:18044"
/db_xref="MIM:604437"
CDS 127..1641
/gene="SLC38A3"
/gene_synonym="G17"
/gene_synonym="SN1"
/codon_start=1
/product="solute carrier family 38, member 3"
/protein_id="AAH42875.1"
/db_xref="GeneID:10991"
/db_xref="HGNC:HGNC:18044"
/db_xref="MIM:604437"
/translation="MEAPLQTEMVELVPNGKHSEGLLPVITPMAGNQRVEDPARSCME
GKSFLQKSPSKEPHFTDFEGKTSFGMSVFNLSNAIMGSGILGLAYAMANTGIILFLFL
LTAVALLSSYSIHLLLKSSGVVGIRAYEQLGYRAFGTPGKLAAALAITLQNIGAMSSY
LYIIKSELPLVIQTFLNLEEKTSDWYMNGNYLVILVSVTIILPLALMRQLGYLGYSSG
FSLSCMVFFLIAVIYKKFHVPCPLPPNFNNTTGNFSHVEIVKEKVQLQVEPEASAFCT
PSYFTLNSQTAYTIPIMAFAFVCHPEVLPIYTELKDPSKKKMQHISNLSIAVMYIMYF
LAALFGYLTFYNGVESELLHTYSKVDPFDVLILCVRVAVLTAVTLTVPIVLFPVRRAI
QQMLFPNQEFSWLRHVLIAVGLLTCINLLVIFAPNILGIFGVIGATSAPFLIFIFPAI
FYFRIMPTEKEPARSTPKILALCFAMLGFLLMTMSLSFIIIDWASGTSRHGGNH"
BASE COUNT 604 a 803 c 619 g 531 t
ORIGIN
1 gccgagttca gccgggagca gagcgaaccg caccggcccg agcggagcgc cgcacgttcc
61 caaccgcgag gccagacatc tgactgttgg tgtgagacca gtgctcctgg tggtgtgccc
121 tgagccatgg aggcgccttt gcagacagag atggtggagc tggtgcccaa tggcaaacac
181 tcagaggggc tgctcccggt catcaccccc atggcaggca accagagggt cgaggaccct
241 gcacggagct gtatggaggg caagagcttc ctacagaaaa gtcccagcaa ggagccacac
301 ttcactgact tcgaggggaa gacatcattc gggatgtcag tgttcaacct cagcaatgcc
361 atcatgggca gcggcatcct gggactcgcc tatgccatgg ccaatacggg cattatcctt
421 ttcctgttcc tgttgacagc tgtcgccttg ctctccagct actccatcca cctgctactc
481 aagtcctcag gggtcgtggg catccgtgcc tatgagcagc tgggctaccg tgcctttggg
541 accccaggaa agctggcagc agccctggcc atcacgctcc agaacatcgg agccatgtcc
601 agctacctgt acatcatcaa gtctgagctg ccacttgtca tacagacctt cctgaacctg
661 gaggagaaaa cctcggactg gtacatgaac gggaactacc tggtaatcct tgtctctgtc
721 accatcattc tgcccctggc actgatgcgg cagcttggct acctgggcta ctccagcggc
781 ttctctctta gctgcatggt gttcttccta attgcagtca tctacaaaaa gttccacgtg
841 ccctgcccac tgccccccaa cttcaacaac accacaggca acttcagcca cgtggagatc
901 gtgaaggaga aggtgcagct gcaggtcgag cctgaggctt cagccttctg cactcccagc
961 tacttcacgc tcaactcaca gacagcatac accatcccca tcatggcctt cgccttcgtc
1021 tgccaccccg aggtgctgcc catctatact gagctcaagg acccctccaa gaagaagatg
1081 cagcacatct ccaacctgtc catcgctgtc atgtacatca tgtacttcct ggctgccctc
1141 ttcggctacc tcaccttcta caacggggtg gagtcggagc tgctgcacac ctacagcaag
1201 gtggacccgt ttgacgtcct gatcctgtgt gtgcgcgtgg ccgtgctgac agcagtcacg
1261 ctcacagtgc ccatcgttct gttcccggtg cgccgcgcca tccagcagat gctgtttcca
1321 aaccaggagt tcagctggct gcggcatgtg cttattgccg ttggcctgct cacttgtatc
1381 aacctgctgg tcatctttgc ccccaacatc ctgggcatct ttggggtcat cggtgccaca
1441 tctgccccat tcctcatctt catcttccct gccatcttct acttccgaat catgcccacg
1501 gagaaggagc ctgcaagatc cacccccaaa atcctggccc tgtgttttgc tatgcttggc
1561 ttcttgctga tgaccatgag cttgagcttc atcatcattg actgggcctc agggaccagc
1621 cggcatggag gaaaccacta gggtgaccct catcctgttc tgtctactca ccctagcagc
1681 cctgcccaga ctcttcagcc cctgctccca tccagtggcc agtcggggga ggagaaagac
1741 gcgattaaca ctgtggcatt cagccaggcc ccatgtcctc tctgtggaag gtttttgttc
1801 aagagccagg accaaggccc ttgggccact accctgctag gctctggagc tgtagaggct
1861 tcctgaactg ggagcagggt agggctgtcg ccttagatcc cgcccaagcc cctcattccc
1921 tccttgcaca gatgcataca ctggggccca gcagctgcct cctgaggtga cacagcctgt
1981 aggaacatac acagctggga tcagcctgca gccatccccc gaccctgctg ctaggccacg
2041 gtctgcgccc tggggcctca tctcccccag cccacttgtt ttcccccctt ttattcccta
2101 ggcccttttc agactcctgg gcccttggat actcttctcc catctccctt cacaggatga
2161 caccctccca taccccatag ctggggccag caggttctgc tgagggtggg gctggtgtag
2221 ggacccccaa gagacccctg tcctgtccct tcaccagtcc tggggaggct gggactcccc
2281 ctgccacaag cctgggccac agctcacatt ccactgctgg gagaagaaac aggccgaggc
2341 ccagagtggc ctgcccccgg gagccaaaga ccccagtggc cacactggga tagggtgggg
2401 aggctggcag ccctctttta taaatattat acataaaaaa aaaaaaaaaa aaaaaaaaaa
2461 aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa
2521 aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaa
//