LOCUS BC042650 3473 bp mRNA linear HUM 27-OCT-2008 DEFINITION Homo sapiens protocadherin gamma subfamily C, 4, mRNA (cDNA clone IMAGE:4914375). ACCESSION BC042650 VERSION BC042650.1 KEYWORDS . SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 3473) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 3473) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (02-JAN-2003) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: David N. Louis, M.D. cDNA Library Preparation: Life Technologies, Inc. cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Baylor College of Medicine Human Genome Sequencing Center Center code: BCM-HGSC Web site: http://www.hgsc.bcm.tmc.edu/cdna/ Contact: amg@bcm.tmc.edu Gunaratne, P.H., Garcia, A.M., Lu, X., Hulyk, S.W., Loulseged, H., Kowis, C.R., Sneed, A.J., Martin, R.G., Muzny, D.M., Nanavati, A.N., Gibbs, R.A. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAK Plate: 29 Row: m Column: 15 This clone was selected for full length sequencing because it passed the following selection criteria: matched mRNA gi: 14277680. FEATURES Location/Qualifiers source 1..3473 /db_xref="H-InvDB:HIT000052733" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="IMAGE:4914375" /tissue_type="Brain, anaplastic oligodendroglioma with 1p/19q loss" /clone_lib="NCI_CGAP_Brn67" /lab_host="DH10B" /note="Vector: pCMV-SPORT6" BASE COUNT 772 a 993 c 918 g 790 t ORIGIN 1 ggagataggt gtctccagct gctgtggctg tttggggcgg gtcggcttca tccgcgtctc 61 aggagcaagt agagaattag cgggcggcag caatgctccg caaggtgaga agctggacag 121 aaatctggcg gtgggctacc cttttgttcc tcttttacca cctgggttac gtttgtgggc 181 agatccgcta cccggtccca gaggagtcac aggaagggac ttttgtaggg aatgtcgctc 241 aagatttcct gctggatacg gacagtctgt cagctcgcag gctgcaggtc gctggagagg 301 tgaaccaaag acacttccgt gtggatttgg acagcggagc cctgctcatc aagaacccaa 361 tcgaccgaga ggcactgtgt gggctcagtg ccagctgcat cgtgcccctg gagtttgtca 421 ccgaaggtcc tttggaaatg taccgagcag aggtagagat cgtagatgtg aatgatcacg 481 ccccccgttt tccgcggcag cagctggact tggaaattgg ggaggcagct cctccaggac 541 agcgtttccc gttggaaaag gctcaggatg cagatgtggg gagcaattcg attagcagct 601 ataggctgag ctccaatgaa cactttgcac tggatgtgaa gaagcgcagc gacggcagcc 661 tggtcccaga gctgctcctg gagaagcctt tggatcgaga gaagcaatcg gactaccgcc 721 tggtgctgac tgctgtcgat ggagggaacc cgccgagatc tggcaccgca gagctccggg 781 tatccgtgct ggacgtaaac gacaacgccc cagccttcca gcaatccagc tacaggatta 841 gtgtgttgga gagcgcacca gcgggcatgg tgctcatcca gctcaatgcc tcagacccgg 901 acctgggtcc cagtggtaac gtcacctttt atttcagtgg tcatacccct gatcgtgtaa 961 gaaacctctt tagcctgcac cccactactg gaaagcttac tcttttgggg cccctagact 1021 ttgagagtga gaattactat gaatttgatg tgcgggctcg cgatgggggt tctccagcca 1081 tggagcaaca ttgcagcctt cgagtggatc tgctggacgt aaatgacaat gccccttaca 1141 tcacagtgac ctcagagctt ggaaccctcc ccgagagtgc agaacctggc actgtggtgg 1201 cacttatcag tgtgcaggat ccagactcag ggtcaaacgg agatgtgagc ctccgcattc 1261 ctgaccactt gccatttgcc ctcaagtctg ccttcaggaa ccagttctcc ctggtgactg 1321 ctggaccctt ggatcgagag gccaaatcta gctatgacat catggtcact gcttctgatg 1381 ctgggaaccc tcctctcagt acccacagaa ctattttcct caatatttca gatgtgaatg 1441 ataatccacc ctctttcttt cagaggtcac atgaggtgtt tgttcctgag aacaatcgcc 1501 caggggacct gctttgctcc cttgcagcct ctgacccaga atgtctacat cccaggcagc 1561 aatgccacac tgaccaacgc agctggcaag cgggatggca aggccccagc aggtggcaat 1621 ggcaacaaga agaagtcggg caagaaggag aagaagtaac atggaggcca ggccaagagc 1681 cacagggcag cctctcccca accagcccag cttctcctta cctgcaccca ggcctcagag 1741 tttcagggct aacccccaga atactggtag gggccaaggc catgctcccc ttgggaaaca 1801 gaaacaagtg cccagtcagc acctacccct tcccccccag ggggttgaat atgcaaaagc 1861 agttccgctg ggaaccccca tccaatcaac tgctgtaccc atgggggtag tggggttact 1921 gtagacacca agaaccattt gccacacccc gtttagttac agctgaactc ctccatcttc 1981 caaatcaatc aggcccatcc atcccatgcc tccctcctcc ccaccccact ccaacagttc 2041 ctctttcccg agtaaggtgg ttggggtgtt gaagtaccaa gtaacctaca agcctcctag 2101 ttctgaaaag ttggaagggc atcatgacct cttggcctct cctttgattc tcaatcttcc 2161 cccaaagcat ggtttggtgc cagccccttc acctccttcc agagcccaag atcaatgctc 2221 aagttttgga ggacatgatc accatcccca tggtactgat gcttgctgga tttagggagg 2281 gcattttgct accaagcctc ttcccaacgc cctggggacc agtcttctgt tttgtttttc 2341 attgtttgac gtttccactg catgccttga cttcccccac ctcctcctca aacaagagac 2401 tccactgcat gttccaagac agtatggggt ggtaagataa ggaagggaag tgtgtggatg 2461 tggatggtgg gggcatggac aaagcttgac acatcaagtt atcaaggcct tggaggaggc 2521 tctgtatgtc ctcaggggac tgacaacatc ctccagattc cagccataaa ccaataacta 2581 ggctggaccc ttcccactac ataatagggc tcagcccagg cagccagctt tgggctgagc 2641 taacaggacc aatggattaa actggcattt cagtccaagg aagctcgaag caggtttagg 2701 accaggtccc cttgagaggt cagaggggcc tctgtgggtg ctgggtactc cagaggtgcc 2761 actggtggaa gggtcagcgg agccccagca ggaagggtgg gccagccagg ccattcttag 2821 tccctgggtt ggggaggcag ggagctaggg cagggaccaa atgaacagaa agtctcagcc 2881 caggatgggg cttcttcaac agggcccctg ccctcctgaa gcctcagtcc ttcaccttgc 2941 caggtgccgt ttctcttccg tgaaggccac tgcccaggtc cccagtgcgc cccctagtgg 3001 ccatagcctg gttaaagttc cccagtgcct ccttgtgcat agaccttctt ctcccacccc 3061 cttctgcccc tgggtccccg gccatccagc ggggctgcca gagaacccca gacctgccct 3121 tacagtagtg tagcgccccc tccctctttc ggctggtgta gaatagccag tagtgtagtg 3181 cggtgtgctt ttacgtgatg gcgggtgggc agcgggcggc gggctccgcg cagccgtctg 3241 tccttgatct gcccgcggcg gcccgtgttg tgttttgtgc tgtgtccacg cgctaaggcg 3301 accccctccc ccgtactgac ttctcctata agcgcttctc ttcgcatagt cacgtagctc 3361 ccaccccacc ctcttcctgt gtctcacgca agttttatac tctaatattt atatggcttt 3421 ttttcttcga caaaaaaata ataaaacgtt tcttctgaaa aaaaaaaaaa aaa //