LOCUS       BC042606                3784 bp    mRNA    linear   HTC 27-OCT-2008
DEFINITION  Homo sapiens pleckstrin homology domain containing, family G (with
            RhoGef domain) member 5, mRNA (cDNA clone IMAGE:4750645), with
            apparent retained intron.
ACCESSION   BC042606
VERSION     BC042606.1
KEYWORDS    HTC.
SOURCE      Homo sapiens (human)
  ORGANISM  Homo sapiens
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
            Catarrhini; Hominidae; Homo.
REFERENCE   1  (bases 1 to 3784)
  AUTHORS   Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
            Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
            Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
            Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
            Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
            Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
            Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
            Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
            Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
            McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
            Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
            Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
            Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
            Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
            Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
            Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
            Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
            Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
  CONSRTM   Mammalian Gene Collection Program Team
  TITLE     Generation and initial analysis of more than 15,000 full-length
            human and mouse cDNA sequences
  JOURNAL   Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
   PUBMED   12477932
REFERENCE   2  (bases 1 to 3784)
  CONSRTM   NIH MGC Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-JAN-2003) National Institutes of Health, Mammalian
            Gene Collection (MGC), Bethesda, MD 20892-2590, USA
  REMARK    NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT     Contact: MGC help desk
            Email: cgapbs-r@mail.nih.gov
            Tissue Procurement: James Cleaver, M.D.
            cDNA Library Preparation: Life Technologies, Inc.
            cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
            DNA Sequencing by: Baylor College of Medicine Human Genome
            Sequencing Center
            Center code: BCM-HGSC
            Web site: http://www.hgsc.bcm.tmc.edu/cdna/
            Contact: amg@bcm.tmc.edu
            Gunaratne, P.H., Garcia, A.M., Lu, X., Hulyk, S.W., Loulseged, H.,
            Kowis, C.R., Sneed, A.J., Martin, R.G., Muzny, D.M., Nanavati,
            A.N., Gibbs, R.A.
            
            Clone distribution: MGC clone distribution information can be found
            through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
            Series: IRAK Plate: 29 Row: k Column: 10
            This clone was selected for full length sequencing because it
            passed the following selection criteria: matched mRNA gi: 38373681
            This clone has the following problem: retained intron.
FEATURES             Location/Qualifiers
     source          1..3784
                     /db_xref="H-InvDB:HIT000052722"
                     /organism="Homo sapiens"
                     /mol_type="mRNA"
                     /db_xref="taxon:9606"
                     /clone="IMAGE:4750645"
                     /tissue_type="Skin, squamous cell carcinoma"
                     /clone_lib="NCI_CGAP_Skn4"
                     /lab_host="DH10B"
                     /note="Vector: pCMV-SPORT6.1"
BASE COUNT          762 a         1216 c         1177 g          629 t
ORIGIN      
        1 ggacgctgac ctcttttgaa gggaggactg aggagatcac cccacccctc ctccggttgg
       61 gaggccagtg gggcccaggg gagcctgggt gccccgctga ctgatgccct ctgctcctcc
      121 cctgcagacg accagagccc cgctgaaaag aagggactgc gctgtcagaa ccccgcctgc
      181 atggacaagg ggcgggcggc caaggtatgt caccacgccg actgccagca gctgcaccgc
      241 cgggggcccc tcaacctctg cgaggcctgt gacagcaagt tccacagcac catgcattat
      301 gatgggcatg tccgcttcga ccttccccca caaggctctg tgctggcccg gaacgtgtcc
      361 acccggtcat gcccgccgcg caccagcccc gcagtggact tggaggagga ggaggaggag
      421 agctctgtgg atggcaaagg ggaccggaag agcacaggcc tgaaactctc caagaagaaa
      481 gcaaggagga gacacacgga tgacccaagc aaggaatgct tcactctgaa atttgacctg
      541 aatgtggaca ttgagacaga gatcgtccca gccatgaaga agaagtcact gggggaggtg
      601 ctgctgcctg tatttgaaag gaagggcatt gcgctgggca aagtggacat ctacctggac
      661 cagtccaaca cacccctgtc cctcaccttc gaggcctaca ggttcggggg acactacctt
      721 cgtgtcaaag ccccagccaa gcctggagat gagggcaagg tggagcaggg catgaaggac
      781 tccaagtccc tgagtttgcc gattctgcgg ccagctggga ccgggccccc cgccctggag
      841 cgtgtggacg cccagagccg ccgggagagc ctggacatct tggcccctgg ccgccgccgc
      901 aagaacatgt cggagttcct gggggaggcg agcatccccg ggcaggagcc ccccacgccc
      961 tccagctgct ctctgcccag cggcagcagt ggcagcacca acactggcga cagctggaag
     1021 aaccgggcgg ccagtcgctt cagcggcttt ttcagctccg gccccagcac cagcgccttt
     1081 ggccgggagg tagacaagat ggagcagctg gagggcaagc tgcacaccta cagcctcttc
     1141 gggctgccca ggctgccccg ggggctgcgc ttcgaccatg actcctggga ggaggagtac
     1201 gatgaagacg aggatgagga caatgcctgc ctgaggctgg aggacagctg gcgggagctc
     1261 attgatgggc atgagaagct gacccggcgg cagtgccacc agcaggaggc ggtgtgggag
     1321 ctgctgcaca cggaggcctc ctacatcagg aaactgcggg tgatcatcaa cctgttcctg
     1381 tgctgcctcc tgaacctgca agagtcaggg ctgctgtgtg aggtggaggc ggagcgcctg
     1441 ttcagcaaca tcccggagat cgcgcagctg caccgcaggc tgtgggctag cgtgatggcg
     1501 ccggtgctgg agaaggcgcg gcgcacgcga gcgctgctac agcccgggga cttcctcaaa
     1561 ggcttcaaga tgttcggctc gctcttcaag ccctacatcc gctactgcat ggaggaggag
     1621 ggctgcatgg agtacatgcg cggcctgctg cgcgacaacg acctcttccg ggcctacatc
     1681 acgtgggcgg agaagcaccc acagtgccag aggctgaagc tgagcgacat gctggccaaa
     1741 ccccaccagc ggctcaccaa gtacccgctg ctgctcaagt cggtgctgag gaagaccgag
     1801 gagccgcgcg ccaaggaggc cgtcgtcgcc atgatcggct ccgtggagcg cttcatccac
     1861 cacgtgaacg cgtgcatgcg gcagcggcag gagcggcagc ggctggcggc cgtggtgagc
     1921 cgcatcgacg cctacgaggt ggtggaaagc agcagcgacg aagtggacaa gctcctgaag
     1981 gaatttctgc acctggactt gacagcgccc atccctggcg cctccccgga ggagacgcgg
     2041 cagctgctgc tggaggggag cctgaggatg aaggagggga aggacagcaa gatggatgtg
     2101 tactgcttcc tcttcacgga tctgctgttg gtgaccaaag cagtgaagaa ggcagagagg
     2161 accagggtca tcaggccacc cctgctcgtg gacaagattg tgtgccggga gctacgggac
     2221 cctgggtcct tcctccttat ctacctgaat gagtttcaca gtgctgtagg ggcctacacg
     2281 ttccaggcca gtggccaggc cttgtgccgt ggctgggtgg acaccattta caatgcccag
     2341 aaccagctgc aacagctgcg tgcacaggag cccccaggca gtcagcagcc cctgcagagc
     2401 ctggaagagg aggaggatga gcaggaggag gaagaggagg aggaggagga ggaggaggaa
     2461 ggcgaggaca gtggcacttc agctgccagc tcccctacca tcatgcggaa aagcagcggc
     2521 agccccgact ctcagcactg tgcctcagat ggctccacgg agaccctggc catggttgtg
     2581 gtagagcctg gggacacgct gtcctccccc gagttcgaca gcggtccttt cagctcccag
     2641 tctgatgaga cctctctcag caccactgcc tcatctgcca cgcccaccag tgagctgctg
     2701 cccctgggtc cggtggacgg ccgctcctgc tccatggact ctgcctacgg caccctctcc
     2761 ccaacctcct tacaagactt tgtggcccca ggcccaatgg cagagctagt gcctcgggcc
     2821 ccagagtccc cacgagttcc ttcccctcca ccctcgcccc gtctccgccg ccgcacccct
     2881 gtccagctgt tgagctgccc gccccacctg ctcaagtcta agtccgaggc cagcctcctc
     2941 cagctgctgg caggggctgg cacccatggg acaccctctg cccccagccg cagcctgtca
     3001 gagctctgcc tggctgttcc agccccaggt attaggactc agggctcccc tcaggaagct
     3061 gggcccagct gggattgccg aggggcccct agccctggca gcggtcctgg gctagtcggc
     3121 tgcctggccg gggaacctgc aggctcccac aggaagaggt gtggagacct gccctcgggg
     3181 gcctctccca gggtccagcc tgagccccca ccaggggtct ctgcccagca caggaagctg
     3241 accctggccc agctctaccg aatcaggacc accctgctgc ttaactccac gctcactgcc
     3301 tcggaggtct gagcagaggg aggcccccaa gagtgccatt gaccaagaga cagcagacag
     3361 cctgcctcct ggggcgtgcc ggcacctgct tcagctactg cctcctgtat gcatgagccg
     3421 gatgctgggc aggatccctg cctacgcccg ggcccgattt gcgctttgcc ggactggatg
     3481 gagtggagga ggcccaggcc acagtaccac cccacctgcc caggcagccc ctcgtcacct
     3541 actccccgaa gttaccagct cagctcgagt cttcagggct gggctcctag gctgcccatc
     3601 ctacttctac cctcactggc ctccagtggg attcactcct gccctgcccc caccttccca
     3661 gtcccacagg ccacccctgg cttgggctgg gttctgtgaa gttacgtatt tattgagctt
     3721 ttggttcttt tataaagact tgtctagact ccaaaaaaaa aaaaaaaaaa aaaaaaaaaa
     3781 aaaa
//