LOCUS BC042452 3846 bp mRNA linear HUM 19-MAR-2009 DEFINITION Homo sapiens solute carrier organic anion transporter family, member 1A2, mRNA (cDNA clone MGC:42358 IMAGE:4820050), complete cds. ACCESSION BC042452 VERSION BC042452.1 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 3846) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 3846) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (02-JAN-2003) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: Miklos Palkovits, M.D., Ph.D. cDNA Library Preparation: Michael J. Brownstein (NHGRI) & Shiraki Toshiyuki and Piero Carninci (RIKEN) cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Baylor College of Medicine Human Genome Sequencing Center Center code: BCM-HGSC Web site: http://www.hgsc.bcm.tmc.edu/cdna/ Contact: amg@bcm.tmc.edu Gunaratne, P.H., Garcia, A.M., Lu, X., Hulyk, S.W., Loulseged, H., Kowis, C.R., Sneed, A.J., Martin, R.G., Muzny, D.M., Nanavati, A.N., Gibbs, R.A. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAK Plate: 71 Row: b Column: 10 The stop codon of the CDS annotated on this record is located > 55 bases upstream of a splice junction, and therefore the mRNA is predicted to be subject to nonsense-mediated mRNA decay (NMD). FEATURES Location/Qualifiers source 1..3846 /db_xref="H-InvDB:HIT000097237" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:42358 IMAGE:4820050" /tissue_type="Brain, hippocampus" /clone_lib="NIH_MGC_95" /lab_host="DH10B" /note="Vector: pBluescriptR" gene 1..3846 /gene="SLCO1A2" /gene_synonym="OATP" /gene_synonym="OATP-A" /gene_synonym="OATP1A2" /db_xref="GeneID:6579" /db_xref="HGNC:HGNC:10956" /db_xref="MIM:602883" CDS 92..1318 /gene="SLCO1A2" /gene_synonym="OATP" /gene_synonym="OATP-A" /gene_synonym="OATP1A2" /codon_start=1 /product="SLCO1A2 protein" /protein_id="AAH42452.2" /db_xref="GeneID:6579" /db_xref="HGNC:HGNC:10956" /db_xref="MIM:602883" /translation="MFLLAITCAFVSKTLSGSYMNSMLTQIERQFNIPTSLVGFINGS FEIGNLLLIIFVSYFGTKLHRPIMIGIGCVVMGLGCFLKSLPHFLMNQYEYESTVSVS GNLSSNSFLCMENGTQILRPTQDPSECTKEVKSLMWVYVLVGNIVRGMGETPILPLGI SYIEDFAKFENSPLYIGLVETGAIIGPLIGLLLASFCANVYVDTGFVNTDDLIITPTD TRWVGAWWFGFLICAGVNVLTAIPFFFLPNTLPKEGLETNADIIKNENEDKQKEEVKK EKYGITKDFLPFMKSLSCNPIYMLFILVSVIQFNAFVNMISFMPKYLEQQYGISSSDA IFLMGIYNLPPICIGYIIGGLIMKKFKITVKQAAHIGCWLSLLEYLLYFLSFLMTCEN SSVVGINTSYEGYVVF" BASE COUNT 1166 a 654 c 670 g 1356 t ORIGIN 1 aataattatt tattctttgg agcaattggg tgaagtatgt ttttatgagc aaatttacct 61 ttctctccaa gttctcccaa atttggaaac catgtttctg ttggcaataa catgtgcatt 121 tgtatccaaa acactgtctg gatcttatat gaattccatg ctcacacaaa tagagagaca 181 attcaacatc ccaacatctc tagttggatt cattaatgga agctttgaga ttggaaatct 241 tttgttgatt atatttgtga gttattttgg aaccaaactg catagaccta taatgattgg 301 cattggatgt gtggttatgg gcttaggctg tttcttaaaa tcactacctc atttcctcat 361 gaaccaatat gaatatgaat ctacagtttc agtttcaggc aacttgtcct caaacagttt 421 cttgtgtatg gaaaatggaa cccagatttt aagaccaacg caggatccat cagagtgtac 481 aaaggaagtt aaatcattaa tgtgggtgta cgtcctagta ggcaatattg tacgtggaat 541 gggtgaaact cccatcctgc ctttgggtat ttcctatata gaagattttg ccaaatttga 601 aaattctcct ttatatattg ggcttgtaga aacaggagct attattggtc ctttgattgg 661 acttttgttg gcatcattct gtgcaaatgt ttatgttgac actggatttg tgaacacaga 721 tgatctgatc ataactccca ctgacactcg ttgggtcggt gcatggtggt ttggctttct 781 gatttgtgca ggagttaacg tgctcactgc cattcctttt ttctttttgc ccaacacact 841 tccaaaggaa ggactagaga ctaatgctga catcattaaa aatgaaaatg aagacaaaca 901 aaaagaagag gtcaagaagg aaaaatatgg aatcactaaa gattttctac ctttcatgaa 961 aagtctttcc tgcaatccaa tttatatgct tttcatactt gtaagtgtga tacagttcaa 1021 tgcattcgtt aacatgatct ccttcatgcc taaataccta gaacagcaat atggaatatc 1081 atcttcagat gcaatctttc taatgggtat ttataactta cctccaatat gtattggata 1141 tataattggt ggtttaatta tgaagaagtt caagattact gtcaaacaag ctgcccacat 1201 aggatgttgg ttatccttac ttgagtatct tctctatttt ttatcttttc tcatgacttg 1261 tgaaaattct tcagttgttg gaataaatac ctcttatgaa gggtatgttg ttttctaatg 1321 aatgtgagaa tctttcaaca aatggttaat atgatatttt ttacaatggc aatgcacgat 1381 cagatcattt tcttattgga gttaatgata gtaatccatg cttttcctgt atctttcctc 1441 catctgtcaa tcaagccaat ctatccaagc tctaggctta ttaatgaggt tgggaacata 1501 tcacagggtg agtgaattta tgattgtatg tgcatgtggg tgtgtgtgca tgattgtgat 1561 atccgagtag acattatcct atgaaagaaa ctacctacag tttcaggttg tattaaaata 1621 tgttatccat atatcttata ctcccataac tgagtaaaac taagagttga ttatacagtc 1681 aaaatggcct ttatatgttt ccccaatggg cttaagtttg gcataactaa atcataatac 1741 atgataaatt aattaataca taattcatat atttcattta tattgctatg tctaaaatat 1801 tgaatcattt catattttgt attttaaagg ttatctgggt tttactgaaa tgttttccat 1861 agtgatgtac attaaaagag ttcacctgta gggcgtattt tgacaatcaa gctatcagtt 1921 aaaatgaaat aaagaacatc ctaaaatgtt ttttcaaaat tatcaaggtt tattagattg 1981 aaataatttc aaatgtaaaa tagtaatata attttacata tgctatttga tttgagactc 2041 atgagcttca tctaagataa gcattattat ctccacttta cagattaaat tgagattcag 2101 agaaatttaa tgataaaagc agttcatttc aaatctcttc aactacatca atatagaaat 2161 ggattttaaa attggaataa attttaaaga ttgcctccat ctccaatgat gctgattccc 2221 agacagaatg tgtagaaagt cgcactgtga tctagtctga atgcagtctc taaactgcta 2281 tgcaagtgct ctttcaatca tattacaagc actggtcact ttttatatta gtagaatgca 2341 cttctttaat tcaaatacct atgtttctgg agctaaatgt attatctata ttacaaatgg 2401 aactttcaga tttttatctt catgctagtc ctgtcttgct atttgctacc taatggatga 2461 atcacagaga ttagttcatc ttcatctttc gagatctaat agtatgtgaa aacatgactc 2521 cacatggtag gtgctcaatt aatgcttgtt tattgcctat atattcttct gagataaatc 2581 attgaaggag tggctatgtg gtcatcaaag caggtctctt ttataccaaa gctatagtaa 2641 acaggtcaca cattgatgac tggaaaattt ctctttctat tcatgggagg agaggaaatc 2701 taactgggga ttgagatgaa aagaagaaaa aaaggattga atcctctttt aatatctatg 2761 gcattatttt aaatcacttc agaattccac aagatttata tgtggaaaat gacatctttg 2821 ctgattgcaa tgtggattgc aactgtccat ctaaaatatg ggatcctgtg tgtggaaaca 2881 atggcttgtc atatctgtca gcttgtcttg ctggttgtga gacatccatt ggaacgggaa 2941 taaacatggt gttccaaaat tgcagctgta ttcaaacatc aggaaattca tctgcagttc 3001 ttgggctgtg cgacaaagga cctgactgtt ccttgatgct ccagtacttc ctaatcttgt 3061 cagcgatgag cagtttcatt tattctttgg ctgccatacc tggatatatg gttctcttga 3121 ggtgtatgaa atctgaagag aagtcccttg gtgtgggatt acatacattt tgcacaagag 3181 tatttgctgg cattcctgca cctatatatt ttggcgcttt aatggattcc acatgtttac 3241 actggggaac tttgaaatgt ggtgagtcag gggcatgcag gatatatgat tccaccacct 3301 tcaggtaaag ataataattt gtttaaaatt gttttataag catagactgt gcataacgca 3361 gcaccattca cacgtaactt tttctttgtc aagtgaaaag aatacttttg tggttatttc 3421 cagcagagat actgatgtta tatctccatt ccttatttgc atactagaat tgtattttcc 3481 cattatttct caagtgcttg gtaaatataa gcatacatgg cttccctaac cttggctttc 3541 aaagtgttgt tcgttaaatt cttagcagtc aacacaatat tgaaggtaat ggttgtacac 3601 tgatacctat ccaatttata ttgctctcta aaggctctca ttttatcctg catgatttcg 3661 tcatctcacg agtctgaagc ctcacttcct ctcaccacca gtctctggtc tccaaaatca 3721 tatattttct ccctctttac attttgctga aacaatcttc ttcatgtctc ctaatgcctt 3781 ctctttggta aatacaaatc taattttgaa taaaactctt tgttatttct aaaaaaaaaa 3841 aaaaaa //