LOCUS BC042441 3058 bp mRNA linear HUM 19-OCT-2006
DEFINITION Homo sapiens JAZF zinc finger 1, mRNA (cDNA clone MGC:42877
IMAGE:4831063), complete cds.
ACCESSION BC042441
VERSION BC042441.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 3058)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 3058)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (02-JAN-2003) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Miklos Palkovits, M.D., Ph.D.
cDNA Library Preparation: Michael J. Brownstein (NHGRI) & Shiraki
Toshiyuki and Piero Carninci (RIKEN)
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Baylor College of Medicine Human Genome
Sequencing Center
Center code: BCM-HGSC
Web site: http://www.hgsc.bcm.tmc.edu/cdna/
Contact: amg@bcm.tmc.edu
Gunaratne, P.H., Garcia, A.M., Lu, X., Hulyk, S.W., Loulseged, H.,
Kowis, C.R., Sneed, A.J., Martin, R.G., Muzny, D.M., Nanavati,
A.N., Gibbs, R.A.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 72 Row: i Column: 11
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 31341302.
FEATURES Location/Qualifiers
source 1..3058
/db_xref="H-InvDB:HIT000052693"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:42877 IMAGE:4831063"
/tissue_type="Testis"
/clone_lib="NIH_MGC_97"
/lab_host="DH10B"
/note="Vector: pBluescriptR"
gene 1..3058
/gene="JAZF1"
/gene_synonym="DKFZp761K2222"
/gene_synonym="TIP27"
/gene_synonym="ZNF802"
/db_xref="GeneID:221895"
/db_xref="HGNC:HGNC:28917"
/db_xref="MIM:606246"
CDS 30..761
/gene="JAZF1"
/gene_synonym="DKFZp761K2222"
/gene_synonym="TIP27"
/gene_synonym="ZNF802"
/codon_start=1
/product="JAZF zinc finger 1"
/protein_id="AAH42441.1"
/db_xref="GeneID:221895"
/db_xref="HGNC:HGNC:28917"
/db_xref="MIM:606246"
/translation="MTGIAAASFFSNTCRFGGCGLHFPTLADLIEHIEDNHIDTDPRV
LEKQELQQPTYVALSYINRFMTDAARREQESLKKKIQPKLSLTLSSSVSRGNVSTPPR
HSSGSLTPPVTPPITPSSSFRSSTPTGSEYGEEEVDYEESDSDESWTTESAISSEAIL
SSMCMNGGEEKPFACPVPGCKKRYKNVNGIKYHAKNGHRTQIRVRKPFKCRCGKSYKT
AQGLRHHTINFHPPVSAEIIRKMQQ"
BASE COUNT 982 a 609 c 564 g 903 t
ORIGIN
1 gacagcaggg gggctctcga tgtagcacca tgacaggcat cgccgccgcc tccttcttct
61 ccaatacctg ccgattcggg ggctgcggac tccacttccc caccctggcc gacctcatcg
121 agcacatcga ggacaaccac atcgatacag atccacgggt tttagaaaaa caagaattac
181 agcagccaac ctatgttgcc ctgagttaca taaatagatt catgacagat gctgcccgcc
241 gagagcagga gtccctaaag aagaagattc agccgaagct ctcgctgact ctgtccagct
301 cagtgtctcg agggaatgtg tccactcccc cacgccacag cagtggaagc cttactcccc
361 ccgtgacccc acccatcacc ccctcctctt cattccgcag cagcactccg acaggcagcg
421 agtatggcga ggaggaggtg gactatgagg agtcggacag cgatgagtcc tggaccacag
481 agagtgccat cagctccgaa gccatcctca gctccatgtg catgaatgga ggggaagaga
541 agccttttgc ctgcccagtt cctggatgta aaaagagata caagaatgtg aatggcataa
601 agtatcacgc taagaatggt cacagaacac agattcgtgt ccgcaaacca ttcaagtgtc
661 gctgtgggaa gagttacaag acagctcagg gcctgcggca ccacacaatc aatttccatc
721 ccccggtgtc ggctgagatt atcaggaaga tgcagcaata acatgctggt cataactgtg
781 ccaagaaatc ctcaccagca gttgctgatt ttgaaaacag ccaccttttt tcaggggaag
841 cattcagcaa ccctttaaag aaaaagaatt aaatgcatgc tttaaatttt ttctgtaatt
901 ttggaatgat gtatctttgt agagttaatg attttgtaca tttgcacatg taatcatcat
961 acccattttc attactttga tataaggtgc taaacaaaaa aagctctagg ttcttcagca
1021 catttccccc aaaacaaaat aaaattgagg gcatgttgca tattgttgaa ttgtattgcg
1081 gtggtatcaa cctgggggga ggaggggctg gcactgagat tttttttttc aagattgtaa
1141 tgtgattgaa gttttcaaca catcaactca catatgttca aaaccaaaat aataccttca
1201 ttatcaaact ggttaccatg ccttacataa tggagttagt atttgtgagt agaaagactt
1261 taggtaatgg aaatataaat aagaaagaat gtttaacata atatgctaaa aatattttca
1321 tatttaaata acatacgtaa aggtgtgctt tctgtgtttt atattatctt gcaaatcctt
1381 ttgcccttta aaaagctgaa aatcttgcca tctgacttac tagtcatttt agtgttataa
1441 atggcatttt gtacaaaata gtctattcag ttcgttcatt catttaacac acattgattg
1501 agtgcctgct gggtacaagg gattcaattt atgcctattg atatctgcgg accaagatac
1561 ccatttagtg aaatactttt ttccctgaaa tctgttagaa aagactttga aatacttcag
1621 tgcaaagtgt gtgtgtgtga agtttagtta tatcttcatc ttcagatgaa gttttaaagc
1681 actttgtagt tctctattgc caacaattta atgtttatgt gttgccaatt cttgcaacca
1741 ctgccctacc aaacctgtgg gttgcaaatc agaactaaaa ttctaagcac gtttcaaaga
1801 tgaacacttt tgttaagacc cctattgcct cttcttcatg ctcatttttt acttttttta
1861 aaaggtactt ttctcatcac attgtagaga ggtctgcatt ctcattggaa atgtctgttt
1921 agctttataa aacaaacact ttgctgaaat aggaaaatga gccttattga caattaagtg
1981 cttcttgcag caggtggtca aagaaaagca tgactaatac gacctattag agtaatctac
2041 atctggacca ttccttaagt ttttcctcac cgacagtacc atcatgcctt gagtgttctt
2101 ttctcccaag tgctattcct taaacacgag agtttaccag ttgcctaata atgcaataaa
2161 aaatgctttg agatagctaa ctgcccataa aacaaactca aattgcttat aaagtttctt
2221 cccatgttcc catttgatga aaagtcttac atcacatata actgggaagc aggggtccct
2281 cctcaatttt cagacatttt gaaaggatga cagttctgtt tgttagatga gtaaacctct
2341 atattcataa gttctaaaat ccttcattat gagggattca aagtatttat aaaaacactg
2401 ccctctaaaa atttcctcag atctgaagta tggtcttggt cctgaatata cagtgttatc
2461 ctatgtttaa aagggtgatc cagacatgag acgcaactag ttggtgcata agaaggcccc
2521 acttggctat ttcatatcta cctacaattg accaaaaaaa attttttagg ccagcaatta
2581 ttatttagct tcgctctttc tagtgcaaga aactgcaggc tggatcagta gttcaacagc
2641 taaacagtca taaaatagtc attgtgcatg ttaaatttct ttcaatgctt tcaaagataa
2701 attccaattt ctatttactt attcattgtg acagtattac taaacaggta aggatgggaa
2761 tattttgtta tactgtgtat agtgaatgta ttgtactgtg tctgtgaaaa ctgtgcttta
2821 aattatattt tcatatgttt tgttggggac agagcacatt aagtctgaaa gcaacagagg
2881 tttgttttag aactgaaggc aatttaatca aaattcctgt caagaaaagc tgcttataaa
2941 tgtaaatgaa atcacattta aaataaactg cctctgaccc aaaaataaaa aaaaaaaaaa
3001 aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa gaaaaaaaaa aaaaaaaa
//