LOCUS BC042132 2243 bp mRNA linear HUM 07-AUG-2008 DEFINITION Homo sapiens keratin 5, mRNA (cDNA clone MGC:52149 IMAGE:5479022), complete cds. ACCESSION BC042132 VERSION BC042132.1 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 2243) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 2243) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (02-JAN-2003) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: ATCC cDNA Library Preparation: Rubin Laboratory cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: National Institutes of Health Intramural Sequencing Center (NISC), Gaithersburg, Maryland; Web site: http://www.nisc.nih.gov/ Contact: nisc_mgc@nhgri.nih.gov Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B., Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S., Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P., Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R., Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C., McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W., Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L., Young,A., Zhang,L.-H. and Green,E.D. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAL Plate: 44 Row: l Column: 13 This clone was selected for full length sequencing because it passed the following selection criteria: matched mRNA gi: 17318577. FEATURES Location/Qualifiers source 1..2243 /db_xref="H-InvDB:HIT000052654" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:52149 IMAGE:5479022" /tissue_type="Brain, astrocytoma, grade IV" /clone_lib="NIH_MGC_98" /lab_host="DH10B" /note="Vector: pOTB7" gene 1..2243 /gene="KRT5" /gene_synonym="CK5" /gene_synonym="DDD" /gene_synonym="K5" /gene_synonym="KRT5A" /db_xref="GeneID:3852" /db_xref="HGNC:HGNC:6442" /db_xref="MIM:148040" CDS 88..1860 /gene="KRT5" /gene_synonym="CK5" /gene_synonym="DDD" /gene_synonym="K5" /gene_synonym="KRT5A" /codon_start=1 /product="keratin 5" /protein_id="AAH42132.1" /db_xref="GeneID:3852" /db_xref="HGNC:HGNC:6442" /db_xref="MIM:148040" /translation="MSRQSSVSFRSGGSRSFSTASAITPSVSRTSFTSVSRSGGGGGG GFGRVSLAGACGVGGYGSRSLYNLGGSKRISISTSGGSFRNRFGAGAGGGYGFGGGAG SGFGFGGGAGGGFGLGGGAGFGGGFGGPGFPVCPPGGIQEVTVNQSLLTPLNLQIDPS IQRVRTEEREQIKTLNNKFASFIDKVRFLEQQNKVLDTKWTLLQEQGTKTVRQNLEPL FEQYINNLRRQLDSIVGERGRLDSELRNMQDLVEDFKNKYEDEINKRTTAENEFVMLK KDVDAAYMNKVELEAKVDALMDEINFMKMFFDAELSQMQTHVSDTSVVLSMDNNRNLD LDSIIAEVKAQYEEIANRSRTEAESWYQTKYEELQQTAGRHGDDLRNTKHEISEMNRM IQRLRAEIDNVKKQCANLQNAIADAEQRGELALKDARNKLAELEEALQKAKQDMARLL REYQELMNTKLALDVEIATYRKLLEGEECRLSGEGVGPVNISVVTSSVSSGYGSGSGY GGGLGGGLGGGLGGGLAGGGSGSYYSSSSGGVGLSGGLSVGGSGFSASSGRGLGVGFG SGGGSSSSVKFVSTTSSSRKSFKS" BASE COUNT 506 a 594 c 672 g 471 t ORIGIN 1 cttctgcgtc ctgctgagct ctgttctctc cagcacctcc caacccacta gtgcctggtt 61 ctcttgctcc accaggaaca agccaccatg tctcgccagt caagtgtgtc cttccggagc 121 gggggcagtc gtagcttcag caccgcctct gccatcaccc cgtctgtctc ccgcaccagc 181 ttcacctccg tgtcccggtc cgggggtggc ggtggtggtg gcttcggcag ggtcagcctt 241 gcgggtgctt gtggagtggg tggctatggc agccggagcc tctacaacct ggggggctcc 301 aagaggatat ccatcagcac tagtggtggc agcttcagga accggtttgg tgctggtgct 361 ggaggcggct atggctttgg aggtggtgcc ggtagtggat ttggtttcgg cggtggagct 421 ggtggtggct ttgggcttgg tggcggagct ggctttggag gtggcttcgg tggccctggc 481 tttcctgtct gccctcctgg aggtatccaa gaggtcactg tcaaccagag tctcctgact 541 cccctcaacc tgcaaatcga ccccagcatc cagagggtga ggaccgagga gcgcgagcag 601 atcaagaccc tcaacaataa gtttgcctcc ttcatcgaca aggtgcggtt cctggagcag 661 cagaacaagg ttctggacac caagtggacc ctgctgcagg agcagggcac caagaccgtg 721 aggcagaacc tggagccgtt gttcgagcag tacatcaaca acctcaggag gcagctggac 781 agcatcgtgg gggaacgggg ccgcctggac tcagagctaa gaaacatgca ggacctggtg 841 gaagacttca agaacaagta tgaggatgaa atcaacaagc gtaccactgc tgagaatgag 901 tttgtgatgc tgaagaagga tgtagatgct gcctacatga acaaggtgga gctggaggcc 961 aaggttgatg cactgatgga tgagattaac ttcatgaaga tgttctttga tgcggagctg 1021 tcccagatgc agacgcatgt ctctgacacc tcagtggtcc tctccatgga caacaaccgc 1081 aacctggacc tggatagcat catcgctgag gtcaaggccc agtatgagga gattgccaac 1141 cgcagccgga ccgaagccga gtcctggtat cagaccaagt atgaggagct gcagcagaca 1201 gctggccggc atggcgatga cctccgcaac accaagcatg agatctctga gatgaaccgg 1261 atgatccaga ggctgagagc cgagattgac aatgtcaaga aacagtgcgc caatctgcag 1321 aacgccattg cggatgccga gcagcgtggg gagctggccc tcaaggatgc caggaacaag 1381 ctggccgagc tggaggaggc cctgcagaag gccaagcagg acatggcccg gctgctgcgt 1441 gagtaccagg agctcatgaa caccaagctg gccctggacg tggagatcgc cacttaccgc 1501 aagctgctgg agggcgagga atgcagactc agtggagaag gagttggacc agtcaacatc 1561 tctgttgtca caagcagtgt ttcctctgga tatggcagtg gcagtggcta tggcggtggc 1621 ctcggtggag gtcttggcgg cggcctcggt ggaggtcttg ccggaggtgg cagtggaagc 1681 tactactcca gcagcagtgg gggtgtcggc ctaagtggtg ggctcagtgt ggggggctct 1741 ggcttcagtg caagcagtgg ccgagggctg ggggtgggct ttggcagtgg cgggggtagc 1801 agctccagcg tcaaatttgt ctccaccacc tcctcctccc ggaagagctt caagagctaa 1861 gaacctgctg caagtcactg ccttccaagt gcagcaaccc agcccatgga gattgcctct 1921 tctaggcagt tgctcaagcc atgttttatc cttttctgga gagtagtcta gaccaagcca 1981 attgcagaac cacattcttt ggttcccagg agagccccat tcccagcccc tggtctcccg 2041 tgccgcagtt ctatattctg cttcaaatca gccttcaggt ttcccacagc atggcccctg 2101 ctgacacgag aatccaaagt tttcccaaat ctaaatcatc aaaacagaat ccccacccca 2161 atcccaaatt ttgttttggt tctaactacc tccagaatgt gttcaataaa atgcttttat 2221 aatataaaaa aaaaaaaaaa aaa //