LOCUS BC042131 1649 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens Kruppel-like factor 5 (intestinal), mRNA (cDNA clone
MGC:52153 IMAGE:5454169), complete cds.
ACCESSION BC042131
VERSION BC042131.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1649)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1649)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (02-JAN-2003) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 44 Row: j Column: 11
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 52630441.
FEATURES Location/Qualifiers
source 1..1649
/db_xref="H-InvDB:HIT000052653"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:52153 IMAGE:5454169"
/tissue_type="Brain, astrocytoma, grade IV"
/clone_lib="NIH_MGC_98"
/lab_host="DH10B"
/note="Vector: pOTB7"
gene 1..1649
/gene="KLF5"
/gene_synonym="CKLF"
/gene_synonym="IKLF"
/db_xref="GeneID:688"
/db_xref="HGNC:HGNC:6349"
/db_xref="MIM:602903"
CDS 174..1547
/gene="KLF5"
/gene_synonym="CKLF"
/gene_synonym="IKLF"
/codon_start=1
/product="Kruppel-like factor 5 (intestinal)"
/protein_id="AAH42131.1"
/db_xref="GeneID:688"
/db_xref="HGNC:HGNC:6349"
/db_xref="MIM:602903"
/translation="MATRVLSMSARLGPVPQPPAPQDEPVFAQLKPVLGAANPARDAA
LFPGEELKHAHHRPQAQPAPAQAPQPAQPPATGPRLPPEDLVQTRCEMEKYLTPQLPP
VPIIPEHKKYRRDSASVVDQFFTDTEGLPYSINMNVFLPDITHLRTGLYKSQRPCVTH
IKTEPVAIFSHQSETTAPPPAPTQALPEFTSIFSSHQTAAPEVNNIFIKQELPTPDLH
LSVPTQQGHLYQLLNTPDLDMPSSTNQTAAMDTLNVSMSAAMAGLNTHTSAVPQTAVK
QFQGMPPCTYTMPSQFLPQQATYFPPSPPSSEPGSPDRQAEMLQNLTPPPSYAATIAS
KLAIHNPNLPTTLPVNSQNIQPVRYNRRSNPDLEKRRIHYCDYPGCTKVYTKSSHLKA
HLRTHTGEKPYKCTWEGCDWRFARSDELTRHYRKHTGAKPFQCGVCNRSFSRSDHLAL
HMKRHQN"
BASE COUNT 418 a 557 c 370 g 304 t
ORIGIN
1 gagttttgct tttcgtgcgc gccttcgaaa actgcctgcc gctgtctgag gagtccaccc
61 gaaacctccc ctcctccgcc ggcagccccg cgctgagctc gccgacccaa gccagcgtgg
121 gcgaggtggg aagtgcgccc gacccgcgcc tggagctgcg cccccgagtg cccatggcta
181 caagggtgct gagcatgagc gcccgcctgg gacccgtgcc ccagccgccg gcgccgcagg
241 acgagccggt gttcgcgcag ctcaagccgg tgctgggcgc cgcgaatccg gcccgcgacg
301 cggcgctctt ccccggcgag gagctgaagc acgcgcacca ccgcccgcag gcgcagcccg
361 cgcccgcgca ggccccgcag ccggcccagc cgcccgccac cggcccgcgg ctgcctccag
421 aggacctggt ccagacaaga tgtgaaatgg agaagtatct gacacctcag cttcctccag
481 ttcctataat tccagagcat aaaaagtata gacgagacag tgcctcagtc gtagaccagt
541 tcttcactga cactgaaggg ttaccttaca gtatcaacat gaacgtcttc ctccctgaca
601 tcactcacct gagaactggc ctctacaaat cccagagacc gtgcgtaaca cacatcaaga
661 cagaacctgt tgccattttc agccaccaga gtgaaacgac tgcccctcct ccggccccga
721 cccaggccct ccctgagttc accagtatat tcagctcaca ccagaccgca gctccagagg
781 tgaacaatat tttcatcaaa caagaacttc ctacaccaga tcttcatctt tctgtcccta
841 cccagcaggg ccacctgtac cagctactga atacaccgga tctagatatg cccagttcta
901 caaatcagac agcagcaatg gacactctta atgtttctat gtcagctgcc atggcaggcc
961 ttaacacaca cacctctgct gttccgcaga ctgcagtgaa acaattccag ggcatgcccc
1021 cttgcacata cacaatgcca agtcagtttc ttccacaaca ggccacttac tttcccccgt
1081 caccaccaag ctcagagcct ggaagtccag atagacaagc agagatgctc cagaatttaa
1141 ccccacctcc atcctatgct gctacaattg cttctaaact ggcaattcac aatccaaatt
1201 tacccaccac cctgccagtt aactcacaaa acatccaacc tgtcagatac aatagaagga
1261 gtaaccccga tttggagaaa cgacgcatcc actactgcga ttaccctggt tgcacaaaag
1321 tttataccaa gtcttctcat ttaaaagctc acctgaggac tcacactggt gaaaagccat
1381 acaagtgtac ctgggaaggc tgcgactgga ggttcgcgcg atcggatgag ctgacccgcc
1441 actaccggaa gcacacaggc gccaagccct tccagtgcgg ggtgtgcaac cgcagcttct
1501 cgcgctctga ccacctggcc ctgcatatga agaggcacca gaactgagca ctgcccgtgt
1561 gacccgttcc aggtcccctg ggctccctca aatgacagac ctaactattc ctgtgtaaaa
1621 acaacaaaaa caaaaaaaaa aaaaaaaaa
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