LOCUS BC042034 1375 bp mRNA linear HUM 01-SEP-2006
DEFINITION Homo sapiens chromosome 7 open reading frame 46, mRNA (cDNA clone
IMAGE:5263383), complete cds.
ACCESSION BC042034
VERSION BC042034.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1375)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1375)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (23-DEC-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Miklos Palkovits, M.D., Ph.D.
cDNA Library Preparation: Michael J. Brownstein (NHGRI) & Shiraki
Toshiyuki and Piero Carninci (RIKEN)
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 90 Row: o Column: 9
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 40217629
This clone has the following problem: The cds is short compared to
the longest cds in the locus.
FEATURES Location/Qualifiers
source 1..1375
/db_xref="H-InvDB:HIT000097070"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:5263383"
/tissue_type="Brain, hippocampus"
/clone_lib="NIH_MGC_95"
/lab_host="DH10B"
/note="Vector: pBluescriptR"
gene 1..1375
/gene="C7orf46"
/gene_synonym="FLJ45875"
/gene_synonym="MGC72075"
/db_xref="GeneID:340277"
/db_xref="HGNC:HGNC:27977"
CDS 88..396
/gene="C7orf46"
/gene_synonym="FLJ45875"
/gene_synonym="MGC72075"
/codon_start=1
/product="C7orf46 protein"
/protein_id="AAH42034.1"
/db_xref="GeneID:340277"
/db_xref="HGNC:HGNC:27977"
/translation="MERLTLPLGGAAAVDEYLEYRRIVGEDDGGKLFTPEEYEEYKRK
VLPLRLQNRLFVSWRSPTGMDCKLVGPETLCFCTHRYKQHKTDLEAIPQQCPIDLPPK
"
BASE COUNT 424 a 243 c 302 g 406 t
ORIGIN
1 agggggcgcg gtaccaggag ggaacgggac gggtcgggct tcgaggtcag ctggtccgca
61 gggaagcctt tggcttcccc accggcaatg gagcggttga cgttgcctct cggcggcgcg
121 gcggcggtgg acgagtacct ggagtaccgg agaattgttg gtgaggatga tggagggaaa
181 ctttttactc ctgaagaata tgaagaatac aaaagaaaag ttttacctct gcgcttacaa
241 aacagattat ttgtgagctg gcggtcacca acagggatgg attgtaaact tgtgggccca
301 gagacactgt gtttttgtac acataggtat aaacaacata aaactgactt ggaagcgatt
361 cctcagcagt gccccattga tctgcccccc aagtgactgg ctgccagtgc agggcttacc
421 tttatgtccc cttgaatggt agccagccca ttcgctgcag gtgcaaacac tttgctgatc
481 agcacagtgc tgcgcctggc tttacatgca atacatgttc caagtgttca ggattccata
541 gctgcttcac ttgtgcttgt ggtcagcctg catatgccca tgacacagta gtggaaacta
601 agcaagaaag attggctcag gaaaaaccag tgggacagga cattccttat gcagccatgg
661 gaggattaac tggtttcagc tcgctggcgg aaggctacat gcggttagat gacagtggga
721 ttgtaggtac aagtagtcaa gtttcttcat taaggagacc tgaagaggat gatatggctt
781 tctttgaaag acgataccag gaaaggatga aaatggaaaa ggctgctaag tggaaaggaa
841 aagctccatt gccatcagct acaaaacctt catgaagact attggagaaa ttaaaaccat
901 catccaagta tctttttcat gtttatttaa atgtaataat acagtttatt tttcctgaaa
961 ttatttactt ttttttttac tgtataaatg tcttttggga tgtttcctta atttatttaa
1021 ataactaaaa atgtctatta cttttgtcaa aactcataat ttactacttt gtatgtacct
1081 ttctttctcc tgacaaatga ggttatttta tatgagtctg tctgagagta cagtaaatgt
1141 ttttagtaca taataattta actgtttcag gtatttaaaa aattaaagat attatcaagg
1201 gttttggaca aacatatgag ccattttttt gtcattcaaa atagtaagtt aaaaacaaga
1261 gaacaaaaga aaaaaatagt taaaatcatt aattttttta tttttcaaac tttgtaatgt
1321 tatgttttca aataaaaact atctcaaaat tttacaacca aaaaaaaaaa aaaaa
//