LOCUS BC041956 2223 bp mRNA linear HUM 26-NOV-2007
DEFINITION Homo sapiens poly(A) binding protein, cytoplasmic 1-like 2B, mRNA
(cDNA clone IMAGE:5302003), partial cds.
ACCESSION BC041956
VERSION BC041956.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2223)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2223)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (23-DEC-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Miklos Palkovits, M.D., Ph.D.
cDNA Library Preparation: Michael J. Brownstein (NHGRI) & Shiraki
Toshiyuki and Piero Carninci (RIKEN)
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 77 Row: h Column: 1
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 61175236.
FEATURES Location/Qualifiers
source 1..2223
/db_xref="H-InvDB:HIT000096994"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:5302003"
/tissue_type="Brain, hypothalamus"
/clone_lib="NIH_MGC_96"
/lab_host="DH10B"
/note="Vector: pBluescriptR"
gene <1..2223
/gene="PABPC1L2B"
/gene_synonym="RBM32B"
/gene_synonym="RP11-493K23.2"
/db_xref="GeneID:645974"
/db_xref="HGNC:HGNC:31852"
CDS <1..733
/gene="PABPC1L2B"
/gene_synonym="RBM32B"
/gene_synonym="RP11-493K23.2"
/codon_start=2
/product="PABPC1L2B protein"
/protein_id="AAH41956.1"
/db_xref="GeneID:645974"
/db_xref="HGNC:HGNC:31852"
/translation="GADADADAKVAAEVAAEVAAAAAAADADADETLGDCEGNPDFQM
ASLYVGDLHPEVTEAMLYEKFSPAGPILSISICRDKITRRSLGYAYVNYQQPVDAKRA
LETLNFDVIKGRPVRIMWSQRDPSLRKSGVGNVFIKNLGKTIDNKALYNIFSAFGNIL
SCKVACDEKGPKGYGFVHFQKQESAERAIDVMNGMFLNYRKIFVGRFKSHKEREAERG
AWARQSTSADVKDFEEDTDEEATLR"
BASE COUNT 524 a 594 c 506 g 599 t
ORIGIN
1 gggggcggat gcggatgcgg atgcgaaggt ggcggccgag gtggcggccg aggtggcggc
61 tgcggcggcc gccgcggatg cagatgcgga tgagaccctc ggtgactgtg aggggaaccc
121 agattttcag atggcctccc tgtacgtggg cgacctgcac cctgaggtga ccgaggcaat
181 gctgtacgag aagttcagtc cagctgggcc catcctctcc atcagcatct gcagggacaa
241 gatcacccgc cgctcattgg gctacgcgta tgtcaactac cagcaaccgg tggacgccaa
301 gcgggccctg gagaccctga actttgatgt cataaagggc aggccagtgc gcatcatgtg
361 gtcccagagg gacccgtcgc tccgcaagag cggggtgggc aacgtcttca tcaagaacct
421 gggcaagacc atcgacaaca aggcgctgta caacatcttc tcggcgttcg gcaacatcct
481 ctcctgcaaa gtggcctgtg acgaaaaggg gcccaagggc tacgggttcg tgcacttcca
541 aaagcaggaa tctgcggagc gggccatcga tgtgatgaat ggcatgttcc tgaactaccg
601 caaaattttc gtcgggagat tcaagtcgca taaagaacga gaggccgaaa ggggagcctg
661 ggccaggcag tccactagtg ctgacgtcaa ggatttcgag gaagacaccg acgaggaggc
721 caccttgcga tgaagacatc ccaggagcta gccagccagc agagccaaac cttggctcac
781 acccggttta caacccccca cccccagccc tccccggcca acccaccagc agtgtattta
841 ttgtattgag agtgcaggtc tctctctctc tctctctccc cttctctctc cccgcttcct
901 attttctccc tccacctctc ctctccttcc cttcctctcc cccgcccacc cccaccaagg
961 gcgttgtgaa taatcttact aatctgtgcc atttgtaggt taaaggctgc ctcttctccc
1021 tgtggtttgg tttaaaaagc attttcattc tctctttgtt tactgcacag gtggtacaat
1081 ttcatggtag aatcatcaga aaggagaagg atatcagatg agggaagaaa caagagagta
1141 attgctcccc tggtcctact ccccagagag aaccactttt acctttttgg tgtgctgctt
1201 ttccaggctc tcttctctcc ctctctctcc tttgctcacc cccaccccgc cttccctttt
1261 aacacaccgt tatagaatgg ttcatgtatg tggtgtttct taacctgctt tttcagcaac
1321 taaaaccaaa caaaaatcaa cccattgaac ttctttccat gttatcaaca ggcttatgaa
1381 acgtcatctt cagtgcctgc agagtgctcc agtgtatccg tggaccttaa catttctgta
1441 atcattcccg cattgttgga cattcaggtg gcgcctagtt ctttccctgt gtttaagacc
1501 aacattgcgt gctctgtgct ttgatgagtg aatccttcct tgtcaagcca aatctttgct
1561 agcatcccgg tggtctcctt aactgcggac ttgcaagatc cacatataga cattttaaag
1621 acttttcctg tgtgttgcca aaaggccccc ttcataagca ttgtaccgat ttgcactcgt
1681 gccggccagc gcagctagta aagagtatgc ccgtttcccc tgcatagcct cctggtcact
1741 gtaattgatc gtgtgtgtgc gtgcgtgcgt gtgtgcatgc gtgtgtgtgt ctttgtgtgt
1801 gtgtcttggc cagcttggcg ggctgcaaag ggtgtttccc tgtcctcagt ggttttgctg
1861 caatcaaaca ctgtttatta cccccttccc ctgtgcccac ttcctgtcct tttccctgtt
1921 gtcagaaaaa taattcagcg tcattgcagg aaaaaaataa tcacgaagca gacaagttaa
1981 cagaagaaaa ttaatgtcac cagtaatcat ttctgatgat tacttataca ttcctgaaac
2041 attttcatct gtatctgccc tgtatttttc atgtgatata tatgtgaaat tattgtatat
2101 actgtttcaa tatctgcttt ttcacacaga aatatatatt atagacatag atttatagat
2161 attcttgaac tttcatgtca ttaaatattc ttctaaaata gaaaaataaa aaaaaaaaaa
2221 aaa
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