LOCUS BC041898 2000 bp mRNA linear HUM 28-JUL-2005 DEFINITION Homo sapiens SOX2 overlapping transcript (non-coding RNA), mRNA (cDNA clone IMAGE:5298799). ACCESSION BC041898 VERSION BC041898.2 KEYWORDS . SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 2000) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 2000) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (23-DEC-2002) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT On Aug 25, 2003 this sequence version replaced BC041898.1. Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: Miklos Palkovits, M.D., Ph.D. cDNA Library Preparation: Michael J. Brownstein (NHGRI) & Shiraki Toshiyuki and Piero Carninci (RIKEN) cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Sequencing Group at the Stanford Human Genome Center, Stanford University School of Medicine, Stanford, CA 94305 Web site: http://www-shgc.stanford.edu Contact: (Dickson, Mark) mcd@paxil.stanford.edu Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers, R. M. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAK Plate: 77 Row: c Column: 8. FEATURES Location/Qualifiers source 1..2000 /db_xref="H-InvDB:HIT000096939" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="IMAGE:5298799" /tissue_type="Testis" /clone_lib="NIH_MGC_97" /lab_host="DH10B" /note="Vector: pBluescriptR" BASE COUNT 674 a 373 c 389 g 564 t ORIGIN 1 cactacttcc ttcattggac tgcaaggtat ttctgtttgg aaaagtaatg gagtccagtc 61 aacttcattg atcgccaagg actgtcaaaa ttataaaact tgctgtggag ctctgacatg 121 ccagaagccg ctagaaaaag aagtttgaca ttcagaaact tatcaagagg ttctactctt 181 tggatagaga ccaaaatcat actttgaaaa agcctgacag gtttcttcgg aaaagtggcc 241 atccatggaa tgaatgaaat gttctctttc tattccaggg attgcagtgg caaagctagg 301 ctaggtcttg gaggctggtg taaggcgatg tgggtgaagg caggaggctg atggaaagac 361 tggggggaag aaaaggcgaa atggattcac ggtgccttgg atgaaggacg agaggggaac 421 tgcaagctcc ttcaactggt tctgtccggt gagaagtgat caagcttggg ctgacaagag 481 gctcagggag ccctcacgtt ctttcgcttt tttacctgcc aatcaaactg ctacaagaca 541 acaccctgat ctggcatgga catcgcgggt ccaagcctgt agccccaaat cggataatct 601 ctgcagctga taacaagcaa aagagaagcc aggcaacagc catattaaag aagaaaacaa 661 tcaactctga gatccaactt agaaataatg tttcattcaa gataaggctc gtggcttagg 721 agattgtgac ctggcttgca tcattctaag acttctatcg tctgttttca aaacccaagg 781 aggacctcct tttctgtgtg atagttcctc atgctttgcc agccactggg tctttaagga 841 agcttgccaa gagttcccgg ctgggaagga cagttcgagt tcatcataga caatgagctg 901 gcaccacagt ttaagtgact caccaacctg gttgcccact tcaaaatgtc aagaaccaca 961 ctatctaatt gaaagaactg tgttttagca aagtgtaatt ggatcgcctg gcaagatcat 1021 ctcaaactat gtctctgacc ttgcctttca gtggctattt tgagcacaag aggagaaagg 1081 aaatgattcc tgaattatat cttgttttta aaaattaaga ttaattaata cttggtttta 1141 tgttcattcc attgtaggaa cttagtgatt attacaaaac agtcaaaata ggtcatagca 1201 aaatgaacgt ttaagattag gttaaaacat tcctctgaaa ttttagtatt cacttttgaa 1261 gtgtcaatta ctatatttct gtaatttctc atttttttct tggcttagag tcaagatgaa 1321 aaatgatatt tgaatcaaag acattgtttt gttatatagc cactcctttc taaaatgcaa 1381 atccaccctc ccctcaccaa tgctttattc tttgtgcgcg cacacacaca cacacacaca 1441 cacacacaca cacacacaca cagacataca cagaaccagc acccaaatgg tagaggaggt 1501 ccttccaaga cttctaggac ctggatcatg taagcagtag atgagaaaat gaagtaagag 1561 atatagagta ataacaataa aagtcaatga tttcatttta caaaaaagtc attgtgtagt 1621 actcagatat ttttaagagc aagtattatt atgactaaag tatattatac ttctaaatta 1681 ttatgattct catctaattt caagccacac ataggcgcca tttgaaagca ttttgtgtta 1741 caacctatca acaaaaatca actaatagtt ttataacgtg cataggttta ccccatgggg 1801 aattaaaatt tttatctgca agtatttctg ttgttgtgag actttaggac aagacaacat 1861 ttggtgttaa catagaagaa tattctatgg cttttttagc tttaaagttc attactctaa 1921 aataaagtac acgtggtatt tttaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa 1981 aaaagaaaaa aaaaaaaaaa //