LOCUS BC041811 2712 bp mRNA linear HUM 17-JUL-2006
DEFINITION Homo sapiens calcium channel, voltage-dependent, beta 3 subunit,
mRNA (cDNA clone MGC:41895 IMAGE:5315091), complete cds.
ACCESSION BC041811
VERSION BC041811.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2712)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2712)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (23-DEC-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Miklos Palkovits, M.D., Ph.D.
cDNA Library Preparation: Michael J. Brownstein (NHGRI) & Shiraki
Toshiyuki and Piero Carninci (RIKEN)
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 77 Row: p Column: 1
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 40316927.
FEATURES Location/Qualifiers
source 1..2712
/db_xref="H-InvDB:HIT000052621"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:41895 IMAGE:5315091"
/tissue_type="Brain, hypothalamus"
/clone_lib="NIH_MGC_96"
/lab_host="DH10B"
/note="Vector: pBluescriptR"
gene 1..2712
/gene="CACNB3"
/db_xref="GeneID:784"
/db_xref="HGNC:HGNC:1403"
/db_xref="MIM:601958"
CDS 200..1654
/gene="CACNB3"
/codon_start=1
/product="calcium channel, voltage-dependent, beta 3
subunit"
/protein_id="AAH41811.1"
/db_xref="GeneID:784"
/db_xref="HGNC:HGNC:1403"
/db_xref="MIM:601958"
/translation="MYDDSYVPGFEDSEAGSADSYTSRPSLDSDVSLEEDRESARREV
ESQAQQQLERAKHKPVAFAVRTNVSYCGVLDEECPVQGSGVNFEAKDFLHIKEKYSND
WWIGRLVKEGGDIAFIPSPQRLESIRLKQEQKARRSGNPSSLSDIGNRRSPPPSLAKQ
KQKQAEHVPPYDVVPSMRPVVLVGPSLKGYEVTDMMQKALFDFLKHRFDGRISITRVT
ADLSLAKRSVLNNPGKRTIIERSSARSSIAEVQSEIERIFELAKSLQLVVLDADTINH
PAQLAKTSLAPIIVFVKVSSPKVLQRLIRSRGKSQMKHLTVQMMAYDKLVQCPPESFD
VILDENQLEDACEHLAEYLEVYWRATHHPAPGPGLLGPPSAIPGLQNQQLLGERGEEH
SPLERDSLMPSDEASESSRQAWTGSSQRSSRHLEEDYADAYQDLYQPHRQHTSGLPSA
NGHDPQDRLLAQDSEHNHSDRNWQRNRPWPKDSY"
BASE COUNT 580 a 857 c 770 g 505 t
ORIGIN
1 gtggggggag cggtgatctg agctccgagc agctggtctt cgcggctcgc tccctccttc
61 gcgctctctc gctccctgcc gccgcccgca gggctgcggg gctcggtggc atctcccggg
121 cgcggcccgc agtccttgcc cctgcctccg ggccgctccc gcccccggcg ccgctcgctc
181 ccccgacccg gactccccca tgtatgacga ctcctacgtg cccgggtttg aggactcgga
241 ggcgggttca gccgactcct acaccagccg cccatctctg gactcagacg tctccctgga
301 ggaggaccgg gagagtgccc ggcgtgaagt agagagccag gctcagcagc agctcgaaag
361 ggccaagcac aaacctgtgg catttgcggt gaggaccaat gtcagctact gtggcgtact
421 ggatgaggag tgcccagtcc agggctctgg agtcaacttt gaggccaaag attttctgca
481 cattaaagag aagtacagca atgactggtg gatcgggcgg ctagtgaaag agggcgggga
541 catcgccttc atccccagcc cccagcgcct ggagagcatc cggctcaaac aggagcagaa
601 ggccaggaga tctgggaacc cttccagcct gagtgacatt ggcaaccgac gctcccctcc
661 gccatctcta gccaagcaga agcaaaagca ggcggaacat gttcccccat atgacgtggt
721 gccctccatg cggcctgtgg tgctggtggg accatctctg aaaggttatg aggtcacaga
781 catgatgcag aaggctctct tcgacttcct caaacacaga tttgatggca ggatctccat
841 cacccgagtc acagccgacc tctccctggc aaagcgatct gtgctcaaca atccgggcaa
901 gaggaccatc attgagcgct cctctgcccg ctccagcatt gcggaagtgc agagtgagat
961 cgagcgcata tttgagctgg ccaaatccct gcagctagta gtgttggacg ctgacaccat
1021 caaccaccca gcacagctgg ccaagacctc gctggccccc atcatcgtct ttgtcaaagt
1081 gtcctcacca aaggtactcc agcgtctcat tcgctcccgg gggaagtcac agatgaagca
1141 cctgaccgta cagatgatgg catatgataa gctggttcag tgcccaccgg agtcatttga
1201 tgtgattctg gatgagaacc agctggagga tgcctgtgag cacctggctg agtacctgga
1261 ggtttactgg cgggccacgc accacccagc ccctggcccc ggacttctgg gtcctcccag
1321 tgccatcccg ggacttcaga accagcagct gctgggggag cgtggcgagg agcactcccc
1381 ccttgagcgg gacagcttga tgccctctga tgaggccagc gagagctccc gccaagcctg
1441 gacaggatct tcacagcgta gctcccgcca cctggaggag gactatgcag atgcctacca
1501 ggacctgtac cagcctcacc gccaacacac ctcggggctg cctagtgcta acgggcatga
1561 cccccaagac cggcttctag cccaggactc agagcacaac cacagtgacc ggaactggca
1621 gcgcaaccgg ccttggccca aggatagcta ctgacagcct cctgctgccc taccctggca
1681 ggcacaggcg cagctggctg gggggcccac tccaggcagg gtggcgttag actggcatca
1741 ggctggcact aggctcagcc cccaaaaccc cctgcccagc cccagcttca gggctgcctg
1801 tggtcccaag gttctgggag aaacagggga ccccctcacc tcctgggcag tgacccctac
1861 taggctccca ttccaggtac tagctgtgtg ttctgcaccc ctggcacctt cctctcctcc
1921 cacacaggaa gctgccccac tgggcagtgc cctcaggcca ggatcccctt agcagggtcc
1981 ttcccaccag actcagggaa gggatgcccc attaaagtga caaaagggtg gggtgtgggc
2041 accatggcat gaggaagaaa caaggtccct gagcaggcac aagtcctgac agtcaaggga
2101 ctgctttggc atccagggcc tccagtcacc tcactgccat acattagaaa tgagacaatc
2161 aaagcccccc cagggtggca cacccatccg tttgctgggg tgtggcagcc acatccaaga
2221 ctggagcagc aggctggcca cgctcgggcc agagagagct cacagctgaa gctcttggag
2281 ggaagggctc tcctcaccct gccaggaagc ttcttaacat gtgacaggac cagggaccag
2341 gagcatggtg aagccaagtg gcagatggga gccaacctgg atgggggttt ggggaaggag
2401 ggcatgtgta gcagagaact taggggggcc tccttgcctt tctcattctt ttgccctgca
2461 tcctgtcatt tctgttcttg tccctcatac atctttggag aaccgggctc cagactttgt
2521 tccctgactc atagctgccg cttgttaggt tagggttaga tggggagaga cagggcacag
2581 aggacctgtc tccccggcta ctcttgcctt atggctctag tgtgtgacct acagagcatg
2641 ctccacaagc ccctgcctca cctcactgtc atcactaata aacatcatgc acagtcaaaa
2701 aaaaaaaaaa aa
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