LOCUS BC041801 2240 bp mRNA linear HUM 17-JUL-2006
DEFINITION Homo sapiens DEAD (Asp-Glu-Ala-Asp) box polypeptide 59, mRNA (cDNA
clone MGC:41772 IMAGE:5302098), complete cds.
ACCESSION BC041801
VERSION BC041801.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2240)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2240)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (23-DEC-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Miklos Palkovits, M.D., Ph.D.
cDNA Library Preparation: Michael J. Brownstein (NHGRI) & Shiraki
Toshiyuki and Piero Carninci (RIKEN)
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 77 Row: i Column: 3
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 13775231.
FEATURES Location/Qualifiers
source 1..2240
/db_xref="H-InvDB:HIT000052614"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:41772 IMAGE:5302098"
/tissue_type="Brain, hypothalamus"
/clone_lib="NIH_MGC_96"
/lab_host="DH10B"
/note="Vector: pBluescriptR"
gene 1..2240
/gene="DDX59"
/gene_synonym="DKFZP564B1023"
/gene_synonym="RP11-92G12.2"
/gene_synonym="ZNHIT5"
/db_xref="GeneID:83479"
/db_xref="HGNC:HGNC:25360"
CDS 235..2094
/gene="DDX59"
/gene_synonym="DKFZP564B1023"
/gene_synonym="RP11-92G12.2"
/gene_synonym="ZNHIT5"
/codon_start=1
/product="DEAD (Asp-Glu-Ala-Asp) box polypeptide 59"
/protein_id="AAH41801.1"
/db_xref="GeneID:83479"
/db_xref="HGNC:HGNC:25360"
/translation="MFVPRSLKIKRNANDDGKSCVAKIIKPDPEDLQLDKSRDVPVDA
VATEAATIDRHISESCPFPSPGGQLAEVHSVSPEQGAKDSHPSEEPVKSFSKTQRWAE
PGEPICVVCGRYGEYICDKTDEDVCSLECKAKHLLQVKEKEEKSKLSNPQKADSEPES
PLNASYVYKEHPFILNLQEDQIENLKQQLGILVQGQEVTRPIIDFEHCSLPEVLNHNL
KKSGYEVPTPIQMQMIPVGLLGRDILASADTGSGKTAAFLLPVIMRALFESKTPSALI
LTPTRELAIQIERQAKELMSGLPRMKTVLLVGGLPLPPQLYRLQQHVKVIIATPGRLL
DIIKQSSVELCGVKIVVVDEADTMLKMGFQQQVLDILENIPNDCQTILVSATIPTSIE
QLASQLLHNPVRIITGEKNLPCANVRQIILWVEDPAKKKKLFEILNDKKLFKPPVLVF
VDCKLGADLLSEAVQKITGLKRISIHSEKSQIERKNILKGLLEGDYEVVVSTGVLGRG
LDLISVRLVVNFDMPSSMDEYVHQIGRVGRLGQNGTAITFINNNSKRLFWDIAKRVKP
TGSILPPQLLNSPYLHDQKRKEQQKDKQTQNDLVTGANLMDIIRKHDKSNSQK"
BASE COUNT 706 a 460 c 516 g 558 t
ORIGIN
1 gcgcggtggc cccgcctccc cgccgcccgg aaagcgggct gcggccccct cccaaaaccc
61 ggggaagtgg attctacgct ccgctccgct ccgcaccacc aaccccgggc cgcagtcctg
121 acgagcgggt cagggcttgt cgggcggaag cctggcctgg agcctggaag ggggagacgg
181 cccgagcggg agcgggagcg gacgcggcct cagtcctgcg cggaatattg aaggatgttt
241 gttccaagat ctctaaaaat caagaggaat gctaatgatg atggcaaaag ttgtgtggct
301 aagataatta aaccagaccc agaagacctt cagttggaca aaagcagaga tgttcccgtt
361 gatgctgtag ctacagaagc agccacaata gacaggcaca tcagcgaatc atgccctttc
421 cccagcccag gtggccagtt ggcagaggtt cattcagtaa gtcccgagca gggtgcgaag
481 gacagccatc cttctgaaga gcccgttaag tcattttcca aaacacagcg ctgggcagaa
541 ccaggggaac ccatctgtgt tgtctgtggt cgttatggag agtatatctg tgataagaca
601 gatgaagatg tgtgtagttt ggagtgtaaa gcgaaacatc ttctacaagt taaggaaaag
661 gaagagaaat caaaactcag caatccacag aaggctgatt ctgagccaga gtctccactg
721 aatgcttcct atgtctacaa agagcacccc tttattttga accttcagga agaccagatt
781 gaaaatctta aacagcagct gggaatttta gttcaagggc aagaagtcac caggcccatt
841 attgactttg aacattgtag tctccctgag gtcttaaatc acaacttgaa gaaatcaggc
901 tatgaggtgc caactcccat tcaaatgcag atgattcctg tgggacttct gggaagagac
961 attctggcca gtgcagatac tggctcagga aaaacagctg cttttcttct tcctgttatc
1021 atgcgagctt tattcgagag caaaactcca tctgcgctca ttcttacacc aaccagagag
1081 ttagccattc agatagagag acaagctaaa gaattgatga gtggcctgcc acgcatgaaa
1141 actgtgcttc ttgtaggggg cttaccctta cccccacagc tttatcgtct gcaacaacat
1201 gttaaggtta tcatagcaac ccctgggcga cttctggata taataaagca gagctctgta
1261 gaactctgtg gtgtaaagat tgtggtagta gatgaagctg ataccatgtt aaagatgggt
1321 tttcaacaac aagtgcttga cattttggaa aacattccta atgattgtca gaccattttg
1381 gtttcagcca caattccaac tagcatagaa cagctagcaa gccagcttct gcataatcct
1441 gtgagaatta tcactggaga aaagaaccta ccttgtgcca atgtacgtca gattattttg
1501 tgggtagaag acccagccaa aaagaaaaaa ttatttgaaa ttttaaatga taagaaactc
1561 tttaagcctc cagtgttagt atttgtggac tgcaaactag gagcagatct tttgagtgaa
1621 gccgttcaga aaatcacagg gctgaaaaga atatctatac attcggagaa gtcgcaaata
1681 gaaaggaaaa acatattgaa gggattactt gaaggagact atgaagttgt agtgagcaca
1741 ggagtcttgg gacgaggcct agacttgatc agtgtcaggc tggttgtcaa ttttgatatg
1801 ccttcaagta tggatgagta tgtccatcag attggaagag taggaagatt aggtcaaaat
1861 ggaacagcga ttactttcat caataataat tcaaaaagac tcttctggga tattgcaaaa
1921 cgagtaaagc ccacaggatc cattcttccc cctcagttat taaattcccc ataccttcat
1981 gaccagaaga gaaaggaaca acagaaagat aaacagacac agaatgatct ggttacagga
2041 gctaatctta tggatattat cagaaaacat gataaaagta attctcagaa atgattttct
2101 ctgccacttg aatatttttt tttattgtat atagtcagca aaaaattatg gtttgcataa
2161 atggaaatgt acatgaattt taaaaatttt aagatatttt taatttaata aaatttatat
2221 aaccaaaaaa aaaaaaaaaa
//