LOCUS BC041709 3241 bp mRNA linear HUM 06-DEC-2007
DEFINITION Homo sapiens chromosome 5 open reading frame 41, mRNA (cDNA clone
MGC:49003 IMAGE:5761775), complete cds.
ACCESSION BC041709
VERSION BC041709.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 3241)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 3241)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (23-DEC-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Life Technologies, Inc.
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Institute for Systems Biology
http://www.systemsbiology.org
contact: amadan@systemsbiology.org
Anup Madan, Jessica Fahey, Erin Helton, Mark Ketteman, Anuradha
Madan, Stephanie Rodrigues, Amy Sanchez and Michelle Whiting
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 84 Row: m Column: 3
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 23957697.
FEATURES Location/Qualifiers
source 1..3241
/db_xref="H-InvDB:HIT000052599"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:49003 IMAGE:5761775"
/tissue_type="Lung, Spleen, fetal, pooled"
/clone_lib="NIH_MGC_122"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..3241
/gene="C5orf41"
/db_xref="GeneID:153222"
/db_xref="HGNC:HGNC:24050"
CDS 305..2224
/gene="C5orf41"
/codon_start=1
/product="chromosome 5 open reading frame 41"
/protein_id="AAH41709.1"
/db_xref="GeneID:153222"
/db_xref="HGNC:HGNC:24050"
/translation="MPQPSVSGMDPPFGDAFRSHTFSEQTLMSTDLLANSSDPDFMYE
LDREMNYQQNPRDNFLSLEDCKDIENLESFTDVLDNEGALTSNWEQWDTYCEDLTKYT
KLTSCDIWGTKEVDYLGLDDFSSPYQDEEVISKTPTLAQLNSEDSQSVSDSLYYPDSL
FSVKQNPLPSSFPGKKITSRAAAPVCSSKTLQAEVPLSDCVQKASKPTSSTQIMVKTN
MYHNEKVNFHVECKDYVKKAKVKINPVQQSRPLLSQIHTDAAKENTCYCGAVAKRQEK
KGMEPLQGHATPALPFKETQELLLSPLPQEGPGSLAAGESSSLSASTSVSDSSQKKEE
HNYSLFVSDNLGEQPTKCSPEEDEEDEEDVDDEDHDEGFGSEHELSENEEEEEEEEDY
EDDKDDDISDTFSEPGYENDSVEDLKEVTSISSRKRGKRRYFWEYSEQLTPSQQERML
RPSEWNRDTLPSNMYQKNGLHHGKYAVKKSRRADVEDLTPNPKKLLQIGNELRKLNKV
ISDLTPVSELPLTARPRSRKEKNKLASRACRLKKKAQYEANKVKLWGLNTEYDNLLFV
INSIKQEIVNRVQNPRDERGPNMGQKLEILIKDTLGLPVAGQTSEFVNQVLEKTAEGN
PTGGLVGLRIPTSKV"
BASE COUNT 1126 a 597 c 688 g 830 t
ORIGIN
1 cgggaacccg tcaggaagga cataaacaaa acaaacccga ggcagcatgg agaggggccg
61 tggcccctgc agcggaaccg gacccagtcc ctgagccgcc cctacaccca cagacagcat
121 cgcacagaat tattttaaaa aaaagcagtg atccaagcaa ttgaattgga agcactctgg
181 ggaaacctgc tgtttattgt ggaaatcatc ttcgatcttg gaattgaaag taaagctgga
241 aaggaattta caaacaagaa aaaaaagaag tttggaatcg gattcacagg atctgggctt
301 ggaaatgcct cagcctagtg taagcggaat ggatccgcct ttcggggatg cctttcgaag
361 ccacaccttt tcggaacaaa ctctgatgag cacagatctc ttagcaaaca gttcggatcc
421 agatttcatg tatgaactgg atagagagat gaactaccaa cagaatccta gagacaactt
481 tctttctttg gaggactgca aagacattga aaatctggag tctttcacag atgtcctgga
541 taatgagggt gctttaacct caaactggga acagtgggat acatactgtg aagacctaac
601 gaaatatacc aaactaacca gctgtgacat ctggggaaca aaagaagtgg attacttggg
661 tcttgatgac ttttctagtc cttaccaaga tgaagaggtt ataagtaaaa ctccaacttt
721 agctcaactt aatagtgagg actcacagtc tgtttctgat tccctttatt accccgattc
781 acttttcagt gtcaaacaaa atcccttacc ctcttcattc cctggtaaaa agatcacaag
841 cagagcagct gctcctgtgt gttcttctaa gactctgcag gctgaggtcc ctttgtcaga
901 ctgtgtccaa aaagcaagta aacccacttc aagcacacaa atcatggtga agaccaacat
961 gtatcataat gaaaaggtga actttcatgt tgaatgtaaa gactatgtaa aaaaggcaaa
1021 ggtaaagatc aacccagtgc aacagagccg gcccttgttg agccagattc acacagatgc
1081 agcaaaggag aacacctgct actgtggtgc agtggcaaag agacaagaga aaaaagggat
1141 ggagcctctt caaggtcatg ccactcccgc tttgcctttt aaagaaaccc aggaactatt
1201 actaagtccc ctgccccagg aaggtcctgg gtcacttgca gcaggagaga gcagcagtct
1261 ttctgccagt acatcagtct cagattcatc ccagaaaaaa gaagagcaca attattctct
1321 ttttgtctcc gacaacttgg gtgaacagcc aactaaatgc agtcctgaag aagatgagga
1381 ggacgaggag gatgttgatg atgaggacca tgatgaagga ttcggcagtg agcatgaact
1441 gtctgaaaat gaggaggagg aagaagagga agaggattat gaagatgaca aggatgatga
1501 tattagtgat actttctctg aaccaggcta tgaaaatgat tctgtagaag acctgaagga
1561 ggtgacttca atatcttcac ggaagagagg taaaagaaga tacttctggg agtatagtga
1621 acaacttaca ccatcacagc aagagaggat gctgagacca tctgagtgga accgagatac
1681 tttgccaagt aatatgtatc agaaaaatgg cttacatcat ggaaaatatg cagtaaagaa
1741 gtcacggaga gctgatgtag aagacctgac tccaaatcct aaaaaactcc tccagatagg
1801 caatgaactt cggaaactga ataaggtgat tagtgacctg actccagtca gtgagcttcc
1861 cttaacagcc cgaccaaggt caaggaagga aaaaaataag ctggcttcca gagcttgtcg
1921 gttaaagaag aaagcccagt atgaagctaa taaagtgaaa ttatggggcc tcaacacaga
1981 atatgataat ttattgtttg taatcaactc catcaagcaa gagattgtaa accgggtaca
2041 gaatccaaga gatgagagag gacccaacat ggggcagaag cttgaaatcc tcattaaaga
2101 tactctcggt ctaccagttg ctgggcaaac ctcagaattt gttaaccaag tgttagagaa
2161 gactgcagaa gggaatccca ctggaggcct tgtaggatta aggataccaa catcaaaggt
2221 gtaatcagcc tcattggacc actggtcaga aatgtctgcg ttttgtcacg ttatccattg
2281 taaattttca ttctgttttg catgtcagtt agcattatgt aaacatttac aattaggtta
2341 cattgtttta agaactaagt agcataagtg aagcatgatc caaaatactt gattattgca
2401 ttttcagagc ataaaccatg attaaaactg ctactggcat cagaattgaa aatcatatgt
2461 ttaagtaaat gttaggtaca gattacaaaa atctgttaaa gcaaaacatt ttggaggagt
2521 gaaatagtaa aatgccaagt attgtggcag atttatgctc tgaaccacac aaaaaaattg
2581 aggaagcatt tttttaaaca gtcggtttaa attgttttta gaattattgc ttttgttcta
2641 attttccaca accattaatc tcacttgtat atggcacacc cagcacttgt gcctgtgggc
2701 catattagat gttcattgtc agagctcaag atgatatata taaatatata tatatatata
2761 tatatataca cacacacaca caaatgtctg tgcaagtaag aaaaaaaaag catattcttt
2821 gtgccttgta ttttggggaa actctaaaac tggtaatatt ttgtatgatg aaaaccctaa
2881 tgagaaaaaa caagatatat agatggaaaa attatggggt ttaaatgttt ttttgttcca
2941 actctttttc agattttttg aatgtatata gggctatgtt gaaatgtaga tatatgccac
3001 agagtctgtg tattgtataa aaaacaaaac aaaaaacaac aaaaaaaaga tggctctaga
3061 aaactcatat ttcggtactt gaccggaaga agacaaatac ttgcacatta ttgcgattgt
3121 tttatttttt gtaccaaaga caaatgcaac tgatatggca aactgccagt ctaagtaaag
3181 ttttgcacag cttacatgat actgtatgaa tgtatgaaaa aaaaaaaaaa aaaaaaaaaa
3241 a
//