LOCUS BC041706 5889 bp mRNA linear HUM 16-FEB-2007 DEFINITION Homo sapiens DENN/MADD domain containing 4A, mRNA (cDNA clone MGC:48955 IMAGE:5530033), complete cds. ACCESSION BC041706 VERSION BC041706.1 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 5889) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 5889) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (23-DEC-2002) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: ATCC cDNA Library Preparation: Life Technologies, Inc. cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Institute for Systems Biology http://www.systemsbiology.org contact: amadan@systemsbiology.org Anup Madan, Jessica Fahey, Erin Helton, Mark Ketteman, Anuradha Madan, Stephanie Rodrigues, Amy Sanchez and Michelle Whiting Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAK Plate: 84 Row: g Column: 3 This clone was selected for full length sequencing because it passed the following selection criteria: matched mRNA gi: 39930312. FEATURES Location/Qualifiers source 1..5889 /db_xref="H-InvDB:HIT000052597" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:48955 IMAGE:5530033" /tissue_type="Uterus, leiomyosarcoma" /clone_lib="NIH_MGC_71" /lab_host="DH10B" /note="Vector: pCMV-SPORT6" gene 1..5889 /gene="DENND4A" /gene_synonym="IRLB" /db_xref="GeneID:10260" /db_xref="HGNC:HGNC:24321" /db_xref="MIM:600382" CDS 210..5801 /gene="DENND4A" /gene_synonym="IRLB" /codon_start=1 /product="DENN/MADD domain containing 4A" /protein_id="AAH41706.1" /db_xref="GeneID:10260" /db_xref="HGNC:HGNC:24321" /db_xref="MIM:600382" /translation="MIEDKGPRVADYFVVAGLTDVSKPLEEEIHFNDACHKVAKPKEP ITDVSVIIKSLGEEVPQDYICIDVTPTGLSADLNNGSLVGPQIYLCYRRGRDKPPLTD LGVLYDWKERLKQGCEIIQSTPYGRPANISGSTSSQRIYITYRRASENMTQNTLAVTD ICIIIPSKGESPPHTFCKVDKNLNNSMWGSAVYLCYKKSVAKTNTVSYKAGLICRYPQ EDYESFSLPESVPLFCLPMGATIECWPSNSKYPLPVFSTFVLTGASAEKVYGAAIQFY EPYSEENPTEKQRLLLGLTSADGKSDSSKTIHTNKCICLLSHWPFFDAFRKFLTFLYR YSISGPHVLPIEKHISHFMHKVPFPSPQRPRILVQLSPHDNLILSQPVSSPLPLSGGK FSTLLQNLGPENAVTLLVFAVTEHKILIHSLRPSVLTSVTEALVSMIFPFHWPCPYVP LCPLALADVLSAPCPFIVGIDSRYFDLYDPPPDVSCVDVDTNTISQIGDKKNVAWKIL PKKPCKNLMNTLNNLHQQLAKLQQRPRDDGLMDLAINDYDFNSGKRLHMIDLEIQEAF LFFMASILKGYRSYLRPITQAPSETATDAASLFALQAFLRSRDRSHQKFYNMMTKTQM FIRFIEECSFVSDKDASLAFFDDCVDKVDMDKSGEVRLIELDESFKSEHTVFVTPPEI PHLPNGEEPPLQYSYNGFPVLRNNLFERPEGFLQAKKNKLPSKSSSPNSPLPMFRRTK QEIKSAHKIAKRYSSIPQMWSRCLLRHCYGLWFICLPAYVKVCHSKVRALKTAYDVLK KMQSKKMDPPDEVCYRILMQLCGQYDQPVLAVRVLFEMQKAGIDPNAITYGYYNKAVL ESTWPSRSRSGYFLWTKVRNVVLGVTQFKRALKKHAHLSQTTLSGGQSDLGYNSLSKD EVRRGDTSTEDIQEEKDKKGSDCSSLSESESTKGSADCLPKLSYQNSSSIVRLTGTSN NSAGKISGESMESTPELLLISSLEDTNETRNIQSRCFRKRHKSDNETNLQQQVVWGNR NRNLSGGVLMGFMLNRINQEATPGDIVEKLGADAKILSNVISKSTRPNTLDIGKPPLR SKRDSLEKESSDDDTPFDGSNYLADKVDSPVIFDLEDLDSETDVSKAGCVATQNPKRI QRMNSSFSVKPFEKTDVATGFDPLSLLVAETEQQQKEEEEEDEDDSKSISTPSARRDL AEEIVMYMNNMSSPLTSRTPSIDLQRACDDKLNKKSPPLVKACRRSSLPPNSPKPVRL TKSKSYTKSEEKPRDRLWSSPAFSPTCPFREESQDTLTHSSPSFNLDTLLVPKLDVLR NSMFTAGKGVAEKASKWYSRFTMYTTSSKDQSSDRTSLSSVGAQDSESTSLTDEDVCH ELEGPISSQETSATSGTKRIDLSRISLESSASLEGSLSKFALPGKSEVTSSFNASNTN IFQNYAMEVLISSCSRCRTCDCLVHDEEIMAGWTADDSNLNTTCPFCGNIFLPFLNIE IRDLRRPGRYFLKSSPSTENMHFPSSISSQTRQSCISTSASGLDTSALSVQGNFDLNS KSKLQENFCTRSIQIPANRSKTAMSKCPIFPMARSISTSGPLDKEDTGRQKLISTGSL PATLQGATDSLGLEWHLPSPDPVTVPYLSPLVVWKELESLLENEGDHAITVADFVDHH PIVFWNLVWYFRRLDLPSNLPGLILSSEHCNKYSKIPRHCMSEDSKYVLIQMLWDNMK LHQDPGQPLYILWNAHTQKYPMVHLLQKSDNSFNQELLKSMVKSIKMNDVYGPMSQIL ETLNKCPHFKRQRSLYREILFLSLVALGRENIDIDAFDKEYKMAYDRLTPSQVKSTHN CDRPPSTGVMECRKTFGEPYL" BASE COUNT 1863 a 1173 c 1186 g 1667 t ORIGIN 1 aagcgggctc agagcgccgc ggcattcagc ccctcgtgtt ccgctaccgc gcgtgcggga 61 ttccggcgcc gctctccgag ctcgatccgc tgctcgcacg ggagccagct gggtgttatt 121 tctcaaactc tgaggctgcg gagttcacac attgaaatct gtcatctttt tcagagagaa 181 actttcgatg taaccttctg taatggaaga tgattgaaga caaggggcct cgtgttgctg 241 actactttgt tgtagcagga ttaactgatg tttcaaagcc tctagaagaa gaaattcact 301 tcaatgatgc ttgtcataaa gtagctaaac caaaagaacc tattacagat gtttcagtta 361 ttatcaaatc tcttggggag gaagtcccac aggattatat ctgtattgat gttaccccaa 421 ctggattgtc agctgatctt aataatggaa gtcttgtggg gccacagatt tacctttgct 481 atagaagagg aagagataag cctccactta cagatctggg ggttttatat gactggaaag 541 aaagattgaa acagggttgt gaaattattc agagtactcc ctatgggcgc cccgcaaata 601 ttagtgggag tacctcatca caaagaattt atatcactta ccgaagagcc tctgaaaaca 661 tgactcagaa tacgttggct gtcactgaca tatgtattat tatacccagt aaaggagaaa 721 gcccaccaca cacgttctgc aaagtcgaca agaatctcaa taacagtatg tggggatcag 781 cagtatactt gtgttataaa aaatcggtgg caaagacgaa cactgtatct tacaaagctg 841 gcctaatttg tagatatcct caagaagatt atgagtcatt ctcactaccg gaatctgttc 901 ctctattttg tttaccaatg ggtgcaacca ttgaatgttg gccatcaaat agcaaatacc 961 ctctgcctgt attttctact tttgttttaa ctggagcctc agctgaaaag gtttatggtg 1021 ctgctattca gttttatgaa ccatactctg aggagaatcc cacagaaaag cagagacttc 1081 ttttgggttt aacatcagca gatgggaagt ctgatagttc caaaacaatt catactaaca 1141 aatgcatctg tcttctttct cactggcctt tttttgatgc attcaggaag tttctgactt 1201 ttctgtatcg ttattccatc tctgggcctc atgtccttcc aattgagaag catatttctc 1261 attttatgca taaagttcct tttccatctc ctcagagacc acggatttta gttcagttat 1321 caccacatga taatctgatt ctcagtcagc ctgtgtcttc acctcttcca ctaagtggtg 1381 gcaagttttc aacactactg cagaatttag gccctgaaaa tgctgtgaca ctactggtgt 1441 ttgcagtaac agaacataaa attcttatcc attccctacg gccatccgtg cttactagtg 1501 tgacagaagc attagtgtct atgattttcc ctttccactg gccatgcccg tatgttcctc 1561 tctgcccact ggctttagca gatgtcttga gtgcaccatg tccattcata gtagggattg 1621 attcaagata ctttgatctc tatgatcctc caccagatgt cagttgtgtt gatgtagata 1681 ccaacactat ttctcaaatt ggtgacaaga aaaatgtagc ctggaagata cttccaaaga 1741 agccatgtaa aaatctgatg aacacactga ataatttgca tcagcaattg gcaaaattgc 1801 agcagagacc gagagatgat ggactcatgg atttagcaat aaatgactat gattttaatt 1861 ctggaaagag gttgcacatg atagatttgg aaatccaaga ggcatttttg tttttcatgg 1921 cctctatttt aaaaggttac agatcatact taaggccaat aacacaagcc ccatctgaga 1981 cagccacaga tgcagcctct ctctttgccc tacaagcttt cttaagaagc cgggaccggt 2041 cacatcaaaa attctataac atgatgacca aaacacaaat gtttattcgc ttcattgaag 2101 aatgttcttt tgttagtgac aaagatgcaa gcctggcatt ttttgatgat tgtgtagata 2161 aagtggatat ggacaagagc ggtgaagtac gacttataga actggatgaa tctttcaaaa 2221 gtgaacacac tgtttttgta acaccacctg agatccccca cctacccaat ggtgaagaac 2281 cccctttaca gtacagctat aatggatttc cagttcttag gaacaattta tttgaaagac 2341 ctgaaggatt tctacaagca aagaagaaca aattgccttc aaaatcaagt agtcctaata 2401 gccctttgcc catgttcaga agaacaaaac aggaaattaa atcagcccat aaaattgcaa 2461 agaggtactc ttccatccct cagatgtggt ctaggtgtct actgcgccac tgttatggac 2521 tgtggtttat ttgtctccca gcttatgtga aagtctgtca ttcaaaagtc agggctctga 2581 aaacagcata tgatgtgctt aaaaaaatgc agtcaaagaa gatggatcca cctgatgagg 2641 tatgctaccg cattcttatg caactctgtg gacaatatga tcagccagtg cttgcagttc 2701 gagtgctttt tgaaatgcag aaagctggta ttgaccccaa tgccattact tatggttatt 2761 ataataaggc tgttttggaa agtacctggc cttcaagaag tcgtagtggc tattttcttt 2821 ggacaaaagt aagaaatgtt gttttaggag taacacagtt caaaagagct ttaaagaagc 2881 atgcacactt atcacaaaca actctctcag gtggccagtc tgatcttgga tataattcat 2941 tatctaaaga tgaagttaga agaggggata catctactga agacattcaa gaagaaaaag 3001 ataaaaaagg gagtgattgt agttccttgt cagagagtga gagtacaaaa ggaagtgctg 3061 attgccttcc taagctcagt tatcaaaatt cttccagtat cgttcgcctc actggtacaa 3121 gtaacaacag tgctggtaaa atatcaggag aaagcatgga aagcacacct gagctgctct 3181 taatatcatc tcttgaagat acaaatgaaa cacgaaacat tcaaagtaga tgcttcagga 3241 aaagacataa aagtgacaat gaaactaatt tgcagcagca agtggtctgg ggaaatagaa 3301 accgtaatct tagtggaggg gtactgatgg gatttatgct caatagaatt aaccaggaag 3361 caacccctgg agatatagtt gaaaaattgg gagctgatgc aaaaattctt tcaaatgtta 3421 tctcaaaaag cacgagacca aatactcttg atattgggaa gccaccttta agatcaaaaa 3481 gagacagtct agaaaaggaa tctagtgatg atgatacacc ttttgatggt tctaactatt 3541 tggcagataa agtggattct cctgttattt ttgacttaga agacttagac agtgaaacag 3601 atgtatcaaa agcaggatgt gttgctacac aaaatcccaa gaggattcaa cgtatgaaca 3661 gcagcttttc agtaaaacct tttgaaaaaa ctgatgtcgc aacaggattt gatcccctct 3721 ctcttttggt tgctgagact gaacagcagc aaaaagaaga agaggaggag gatgaagatg 3781 atagcaaaag catttcaaca ccatctgcta ggcgtgattt agctgaagaa attgtgatgt 3841 atatgaataa catgagcagt cctttgacaa gtcgtacacc aagcattgat ttacaacggg 3901 catgtgatga taaattaaat aagaaaagtc caccattggt caaggcatgc agaagatcta 3961 gtctgcctcc taattctcct aagccagtga gacttaccaa atctaaaagt tacacaaaaa 4021 gtgaggagaa accaagggat agactttggt cttctccagc cttctcacct acttgcccat 4081 ttagggaaga atctcaggat acattaaccc actcatcacc ttcatttaac ttagatacac 4141 tactagtacc taaactagat gttctaagaa acagtatgtt cactgctgga aaaggagttg 4201 cagagaaagc aagcaaatgg tattcaagat tcaccatgta caccacatca tctaaggatc 4261 aaagttctga tcgtaccagt ctttcttcag tgggagccca ggattctgaa tctacctctt 4321 taacagatga agatgtctgc catgagttgg aaggacctat ctcctctcaa gagaccagtg 4381 ctacttcagg gactaagaga attgatctca gccgaataag cctggaaagt tctgcatcct 4441 tggaaggatc tctgtcgaag tttgccttac ctgggaaatc agaagtgaca tcttccttca 4501 acgcgagtaa tacaaatatc ttccagaact atgcaatgga ggttctcatc tcaagttgct 4561 ctcggtgtag aacttgtgat tgtcttgtcc atgatgagga aatcatggct ggctggacag 4621 cagatgattc aaatctcaat actacatgcc cattctgtgg caatatcttc ttaccctttc 4681 tgaatataga aataagagat ttaagacgac ctggaagata ctttctaaag tcaagcccat 4741 caacagaaaa tatgcacttt ccatcctcca tttcaagtca gacgaggcag tcttgcattt 4801 caacatcagc ctctggtctt gacacatctg ctctctctgt tcaagggaat tttgatctaa 4861 atagcaaatc taaactgcag gaaaattttt gcacccgaag tattcagatc cctgctaata 4921 gatcaaaaac agctatgtct aaatgtccaa tatttccaat ggccaggagt attagtactt 4981 ctggcccctt ggataaggaa gatactggaa gacagaagct catttctaca ggcagcctgc 5041 cagctacttt acaaggagct acagattctt taggtttaga atggcacctt ccaagtcccg 5101 atcctgtcac tgttccgtat cttagtcctt tagtggtatg gaaagaactt gaaagcttat 5161 tggaaaatga aggtgatcat gcaataacag tagcagactt tgtggaccat catccaattg 5221 ttttttggaa cctggtatgg tatttcagac gtcttgactt gcccagtaac ttacctggat 5281 tgattctttc ttctgagcac tgtaacaagt attcaaagat tccccgccac tgtatgtctg 5341 aagatagcaa atatgtttta atacaaatgt tatgggacaa tatgaagtta catcaggatc 5401 cgggacagcc cttgtacatt ctctggaatg cacacaccca aaaatatcca atggtccatt 5461 tattgcaaaa aagtgataac tcatttaacc aggaactgtt gaaaagtatg gtaaaaagca 5521 ttaaaatgaa tgatgtctat ggaccaatga gtcagatttt agagacactg aataagtgtc 5581 cacattttaa aagacagagg agtttataca gagaaatact atttctctca cttgtggcac 5641 tgggaagaga aaacattgat atagatgctt ttgataaaga gtacaagatg gcatacgatc 5701 gtctcacacc tagtcaagtc aagagtacac acaactgtga tagaccacca agtacagggg 5761 tgatggaatg tcgaaaaacc tttggagaac cttatcttta agatgtattt gtatgtgtaa 5821 acattcaatg tatattgtat agtcagtgta taaaataaca cttttagact ctaaaaaaaa 5881 aaaaaaaaa //