LOCUS BC041639 1187 bp mRNA linear HUM 04-AUG-2008
DEFINITION Homo sapiens ribosomal RNA processing 7 homolog A (S. cerevisiae),
mRNA (cDNA clone IMAGE:5094598), partial cds.
ACCESSION BC041639
VERSION BC041639.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1187)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1187)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (20-DEC-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Louis M. Staudt, M.D., Ph.D.
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 44 Row: h Column: 5.
FEATURES Location/Qualifiers
source 1..1187
/db_xref="H-InvDB:HIT000096811"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:5094598"
/tissue_type="Lymph, Burkitt lymphoma"
/clone_lib="NIH_MGC_8"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene <1..1187
/gene="RRP7A"
/gene_synonym="BK126B4.3"
/gene_synonym="CGI-96"
/db_xref="GeneID:27341"
/db_xref="HGNC:HGNC:24286"
CDS <1..838
/gene="RRP7A"
/gene_synonym="BK126B4.3"
/gene_synonym="CGI-96"
/codon_start=2
/product="RRP7A protein"
/protein_id="AAH41639.1"
/db_xref="GeneID:27341"
/db_xref="HGNC:HGNC:24286"
/translation="ARRRKCAARDPEDRIPSPLGYAAIPIKFSEKQQASHYLYVRAHG
VRQGTKSTWPQKRTLFVLNVPPYCTEESLSRLLSTCGLVQSVELQEKPDLAESPKESR
SKFFHPKPVPGFQVAYVVFQKPSGVSAALALKGPLLVSTESHPVKSGIHKWISDYADS
VPDPEALRVEVDTFMEAYDQKIAEEEAKAKEEEGVPDEEGWVKVTRRGRRPVLPRTEA
ASLRVLERERRKRSRKELLNFYAWQHRESKMEHLAQLRKKFEEDKQRIELLRAQRKFR
PY"
BASE COUNT 262 a 344 c 379 g 202 t
ORIGIN
1 ggcgcgcagg aggaagtgcg ccgcgcggga cccggaggac cgtatcccca gcccactggg
61 ctacgcagct attccaatca agttctctga aaagcaacag gcttctcact acctctatgt
121 gagagcacac ggcgttcgac aaggcaccaa gtccacctgg cctcagaaga ggactctttt
181 tgtcctcaat gtgcccccat actgcacaga ggagagcctg tcccgcctcc tgtccacctg
241 tggcctcgtc cagtctgtag agttgcagga gaagccggac ctggctgaga gcccaaagga
301 gtcaaggtcg aagttttttc atcccaagcc agttccgggt ttccaggtag cctatgtggt
361 gttccagaag ccaagtgggg tgtcagcggc cttggccctg aagggccccc tgctggtgtc
421 cacagagagc caccctgtga agagtggcat tcacaagtgg atcagtgact acgcagactc
481 tgtgcccgac cctgaggccc tgagggtgga agtggacacg ttcatggagg catatgacca
541 gaagatcgct gaggaagaag ctaaggccaa ggaggaggag ggggtccctg acgaggaggg
601 ctgggtgaag gtgacccgcc ggggccggcg gcctgtgctc ccccggactg aggcagccag
661 cttgcgggtg ctggagaggg agagacggaa gcgcagccga aaagagctgc tcaacttcta
721 cgcctggcag catcgagaga gcaagatgga gcatctagcg cagctgcgca agaagttcga
781 ggaggacaag cagaggatcg agctgctgcg ggcccagcgc aaattccgac cgtactgagc
841 tgtgagagcc gcagtgaatg gctggaggtg cagggccagg aggaggcgag gcagggcctg
901 cagcggtctc tgagaggccg agctctggcc aacgggcccc aggttgaagg ccaccgcgtc
961 caacagcccc atcagagtcc acacaggcca ggagggaagg accaggccac ccctcgggtc
1021 ttgtgcttca gcagtcctgg ggacccaggc gtgccgagag gaggacttgt ccttcctgct
1081 tcttgcctcc acaccctcct ctccaggacc ctggatgaat ccgttctgtg cttccttttc
1141 cctcaatgca aaagcccttg ctggcaacga aaaagcctca aaagcaa
//