LOCUS       BC041564                1698 bp    mRNA    linear   HUM 17-JUL-2007
DEFINITION  Homo sapiens paired-like homeobox 2a, mRNA (cDNA clone MGC:52227
            IMAGE:5923445), complete cds.
ACCESSION   BC041564
VERSION     BC041564.1
KEYWORDS    MGC.
SOURCE      Homo sapiens (human)
  ORGANISM  Homo sapiens
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
            Catarrhini; Hominidae; Homo.
REFERENCE   1  (bases 1 to 1698)
  AUTHORS   Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
            Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
            Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
            Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
            Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
            Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
            Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
            Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
            Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
            McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
            Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
            Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
            Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
            Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
            Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
            Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
            Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
            Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
  CONSRTM   Mammalian Gene Collection Program Team
  TITLE     Generation and initial analysis of more than 15,000 full-length
            human and mouse cDNA sequences
  JOURNAL   Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
   PUBMED   12477932
REFERENCE   2  (bases 1 to 1698)
  CONSRTM   NIH MGC Project
  TITLE     Direct Submission
  JOURNAL   Submitted (20-DEC-2002) National Institutes of Health, Mammalian
            Gene Collection (MGC), Bethesda, MD 20892-2590, USA
  REMARK    NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT     Contact: MGC help desk
            Email: cgapbs-r@mail.nih.gov
            Tissue Procurement: ATCC
            cDNA Library Preparation: Rubin Laboratory
            cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
            DNA Sequencing by: National Institutes of Health Intramural
            Sequencing Center (NISC),
            Gaithersburg, Maryland;
            Web site: http://www.nisc.nih.gov/
            Contact: nisc_mgc@nhgri.nih.gov
            Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
            Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
            Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
            Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
            Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
            McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
            Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
            Young,A., Zhang,L.-H. and Green,E.D.
            
            Clone distribution: MGC clone distribution information can be found
            through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
            Series: IRAL Plate: 44 Row: o Column: 13
            This clone was selected for full length sequencing because it
            passed the following selection criteria: matched mRNA gi: 46249381.
FEATURES             Location/Qualifiers
     source          1..1698
                     /db_xref="H-InvDB:HIT000052563"
                     /organism="Homo sapiens"
                     /mol_type="mRNA"
                     /db_xref="taxon:9606"
                     /clone="MGC:52227 IMAGE:5923445"
                     /tissue_type="Brain, neuroblastoma"
                     /clone_lib="NIH_MGC_47"
                     /lab_host="DH10B-R"
                     /note="Vector: pOTB7"
     gene            1..1698
                     /gene="PHOX2A"
                     /gene_synonym="CFEOM2"
                     /gene_synonym="NCAM2"
                     /gene_synonym="PMX2A"
                     /db_xref="GeneID:401"
                     /db_xref="HGNC:HGNC:691"
                     /db_xref="MIM:602753"
     CDS             155..1009
                     /gene="PHOX2A"
                     /gene_synonym="CFEOM2"
                     /gene_synonym="NCAM2"
                     /gene_synonym="PMX2A"
                     /codon_start=1
                     /product="paired-like homeobox 2a"
                     /protein_id="AAH41564.1"
                     /db_xref="GeneID:401"
                     /db_xref="HGNC:HGNC:691"
                     /db_xref="MIM:602753"
                     /translation="MDYSYLNSYDSCVAAMEASAYGDFGACSQPGGFQYSPLRPAFPA
                     AGPPCPALGSSNCALGALRDHQPAPYSAVPYKFFPEPSGLHEKRKQRRIRTTFTSAQL
                     KELERVFAETHYPDIYTREELALKIDLTEARVQVWFQNRRAKFRKQERAASAKGAAGA
                     AGAKKGEARCSSEDDDSKESTCSPTPDSTASLPPPPAPGLASPRLSPSPLPVALGSGP
                     GPGPGPQPLKGALWAGVAGGGGGGPGAGAAELLKAWQPAESGPGPFSGVLSSFHRKPG
                     PALKTNLF"
BASE COUNT          285 a          633 c          485 g          295 t
ORIGIN      
        1 ctgagtgcgg ccgcgacggg gcgggcggac tctcgggcgc tcagagctgg cctcgggtcc
       61 tcggagcctg gcgctcgaac ctcccttccg acctccaccc ggaccccgac cccgacccgg
      121 cctggcccgg cccccgcccc cgccccccgg gccgatggac tactcctacc tcaattcgta
      181 cgactcgtgc gtggcggcca tggaggcgtc cgcctacggc gactttggcg cctgcagcca
      241 gcccggcggc ttccaataca gccccctgcg gcccgctttc cccgcggcag ggccgccctg
      301 ccccgcgctc ggctcctcca actgcgcact tggcgcccta cgcgaccacc agcccgcgcc
      361 ctactcggca gtgccctaca agttcttccc agagccatcc ggcctgcacg agaagcgcaa
      421 gcagcggcgc atccgcacca cgttcaccag cgcgcagctc aaggagctgg agcgcgtttt
      481 cgctgagacc cactaccccg acatttacac gcgtgaggag ctggcgctca agatcgacct
      541 cactgaggct cgcgtgcagg tctggttcca gaaccgccgg gccaagttcc gcaaacagga
      601 gcgcgcggcc agcgccaagg gcgcggcggg cgcggcgggc gccaaaaagg gcgaggcgcg
      661 ctgctcctcc gaggacgacg attccaagga gtccacgtgc agccccacgc ccgatagcac
      721 cgcctcgctg ccgccgccgc ctgcgcccgg cctggccagc ccgcgcctga gccccagccc
      781 gctgcccgtc gcactgggct ccgggccggg acctgggccg gggccacagc cgctcaaggg
      841 cgcactgtgg gccggtgtgg cgggcggtgg gggcggcggg cctggcgcgg gagcggccga
      901 actacttaag gcttggcagc cggcggagtc cggccccggg cccttctccg gggttctgtc
      961 ctcctttcac cggaagcccg gccccgccct gaagaccaat ctcttctagc tgccggcctc
     1021 tggaggctcc gagcctgccc ccagagacgt ccctgcccct ccaggacctg acagcccctc
     1081 ccatcctggc cacccgcctg gaagtcccca tccgtctcca ctccctactg tctcacccct
     1141 cggtgtgtcc tccccaactt tggagaccaa gtcagggcca ctctcgtcct cacccaccct
     1201 ctaccagcag agcggagttc tttataccgg gacctcctcc aggagaaccc cggagctcct
     1261 tctagcttgg ccttctttgg atgcggtatc acatgaggcc tgtccctaac agtgccctca
     1321 aagtgaaggt cctcaaggag gatcggcaca gcccccttcc ctggctctgc agcggctggg
     1381 tcacccctta cgctggtgat caggaaagcc cgctgcccca cccctcgggc ccacccgtac
     1441 agaggctggt ggtcgccggg ataattaatg accaccgcca attcatccct cacgtgtctc
     1501 ctctcttccc tagcccgtct ggcacagagg gtggacctgt tagaggagtg gaggggctgc
     1561 ctggggaatg ggacagaggg attctctttc cctaattttt ttggttgtcc tttttctttg
     1621 aaaaacttgt aatttattga agttttactc aatccaaata aaacttaatt tattgaagac
     1681 aaaaaaaaaa aaaaaaaa
//